Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000295-TA|BGIBMGA000295-PA|IPR005225|Small GTP-binding
protein domain, IPR001806|Ras GTPase, IPR013753|Ras, IPR003579|Ras
small GTPase, Rab type
(218 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 211 5e-56
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 193 2e-50
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 158 7e-40
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 151 6e-38
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 133 2e-32
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 129 3e-31
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 117 1e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 114 8e-27
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 107 9e-25
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 94 1e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 87 1e-18
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 84 1e-17
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 75 6e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 74 2e-14
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 74 2e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 71 2e-13
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 68 1e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 66 3e-12
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 49 5e-07
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 49 6e-07
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 34 0.019
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 29 0.40
SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit |Schizos... 27 2.8
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 25 6.5
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 25 6.5
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 8.6
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 211 bits (516), Expect = 5e-56
Identities = 89/160 (55%), Positives = 131/160 (81%)
Query: 14 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 73
+++DY+ KLL+IG+S VGK+ L R+++DSFT +F++T+GIDFK++T+ KR+KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 74 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNK 133
DTAGQER+RTITTAYYRGAMG +L+YD+T+++SF++V+ W + ++ ++ +N IL+GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 134 CDMEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVF 173
CD E++R VS E+G+ LAD+LGV+F E SAK N+NV F
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAF 163
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 193 bits (470), Expect = 2e-50
Identities = 89/198 (44%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
Query: 16 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 75
+DY+FKLL+IG+S VGK+ L R+ADD++T +++ST+G+DFK++T K VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 76 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD 135
AGQER+RTIT++YYRGA G I++YD+T+++SFN+V+ W+ +I Y+ + +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 136 MEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDKMSESLDSEPAML 195
M +++VV ++ AD L + F ETSAK++ NV+ F + I ++M + +
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAK 184
Query: 196 AGGARGQRLTEQPQGSNN 213
+ GQ T Q S+N
Sbjct: 185 SSVKVGQG-TNVSQSSSN 201
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 158 bits (383), Expect = 7e-40
Identities = 68/165 (41%), Positives = 111/165 (67%)
Query: 13 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQI 72
+ +DY+FK ++IG+S VGK++ L R+ + F ST+G++F + + +K++K QI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 73 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGN 132
WDTAGQERYR IT+AYYRGA+G +++YDIT + SF++V W+ +++ ++ N ++LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 133 KCDMEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLV 177
K D+ R VS E + A + + F ETSA + NV+ F+ ++
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVL 168
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 151 bits (367), Expect = 6e-38
Identities = 73/199 (36%), Positives = 122/199 (61%), Gaps = 9/199 (4%)
Query: 20 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 79
FKL+ +G SVGKTS + R+ D F + + +T+GIDF KT++ D+ V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 80 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEEE 139
R+R++ +Y R + I++YDITN SF + + W+ ++ D+ ++LVGNK D+ ++
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 140 RVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDKMSESLDSEPAMLAGGA 199
R V+ E G + A +L + ETSAK NVK +F ++ ++ E+++++ +
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML--PGMENVETQSTQMID-- 187
Query: 200 RGQRLTEQPQGSNNPNCNC 218
++ QP N +CNC
Sbjct: 188 ----VSIQP-NENESSCNC 201
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 133 bits (322), Expect = 2e-32
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Query: 18 YMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 77
++ K++I+G S VGKTS + +Y + F+ + +T+G DF K V DK V LQ+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 78 QERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----VTQIKTYSWDNAQVILVGNK 133
QER++++ A+YRGA +L+YD+ N +SF ++ W + Q + + IL+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 134 CDMEEE-RVVSAERGRQLADQLG-VEFYETSAKENINVKAVFERLVDIICDKM 184
D+EE+ R+VS + G + ++ETSAKE INV+ FE + + + M
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENM 179
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 129 bits (312), Expect = 3e-31
Identities = 61/176 (34%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 14 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF----RHDKRVK 69
+++DY+ K+++ G S GK+ L R+ + + TVGIDF + + KR+K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 70 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVIL 129
LQIWDTAGQE++R++ YYRGA G +L+YD+TN++SF + W++ I+ + V+L
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 130 VGNKCDMEEERVVSAERGRQLADQLGV-EFYETSAKENINVKAVFERLVDIICDKM 184
G+K D++ +R VS E + + + +ETS+ NV+ F +V I ++
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRI 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 117 bits (282), Expect = 1e-27
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAGQE 79
KL+++G+S+VGK+S + R+ D F ST+G F +T+ + VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 80 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDM-EE 138
RY+++ YYR A I++YDIT S + W+ +++ + + + L GNK D+ +E
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 139 ERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDKMSESLDSEPAMLAGG 198
R V A + + F+ETSAK NV +F + + + + L+ +
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL--PLEDKLNQARGAV--- 190
Query: 199 ARGQRLTE-QPQGSNNPNCNC 218
RG L+E +P + +C+C
Sbjct: 191 NRGVNLSEARPAAQPSGSCSC 211
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 114 bits (275), Expect = 8e-27
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 12/188 (6%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
K++I+G+S VGKT + ++ + F+ + +T+G DF K V DK V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQ-IKTYSWDNA--QVILVGNKCDME 137
++++ A+YRGA +++Y++ N +SF+SV++W + + S D I+VGN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 138 -EERVVSAERGRQLADQ---LGVEFYETSAKENINVKAVFERLVDIICDKMSESLD---- 189
+R VS R + +E SAKEN NV +FE + + + S D
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDDFVND 189
Query: 190 -SEPAMLA 196
SEP +L+
Sbjct: 190 FSEPLLLS 197
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 107 bits (258), Expect = 9e-25
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 20 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 79
+KL+++G+ VGK++ + F + T+ ++ K + + L + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 80 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQI-KTYSWDNAQVILVGNKCDMEE 138
Y + Y R GF+L+Y+IT+ SF+ + + QI + D V+LV NKCD+E
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 139 ERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDII 180
ERVVS G QLA + + ETSAK +NV+ F LV I
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 94.3 bits (224), Expect = 1e-20
Identities = 49/161 (30%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
++ ++G+ SVGK+S +Y ++ F ++ T+ F K + + +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDN-AQVILVGNKCDMEEE 139
Y + + + G G++L+Y IT++ SF V+ +I ++ +++VGNK D+ +
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 140 RVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDII 180
R V+AE G+ LA++ + E SA+ N NV FE ++ I
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 87.4 bits (207), Expect = 1e-18
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 20 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 79
FKL+++G+ GKT+F+ R+ F +++T+G++ + + +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 80 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEEE 139
+ + YY I+M+D+T+ ++ +V W + +N ++L GNK D++E
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDVKER 128
Query: 140 RVVSAERGRQLADQLGVEFYETSAKENINVKAVF 173
+V + + + +++Y+ SAK N N + F
Sbjct: 129 KVKA--KAITFHRKKNLQYYDISAKSNYNFEKPF 160
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 84.2 bits (199), Expect = 1e-17
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
K+ +IG+SS+GKTS + Y SF T+G++F KT+ + + IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD----- 135
+ + A+ + M+D++ + + NS+++W Q + ++ A IL+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFN-KTAVPILIGTKYDHFMTF 130
Query: 136 MEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICD 182
E++ ++ R+ A + S +INV+ +F+ ++ + D
Sbjct: 131 PREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFD 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 75.4 bits (177), Expect = 6e-15
Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
KL+I+G+ + GKT L ++ +F +V TV ++ V V + ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQVILVGNKCDM--- 136
Y + Y + ++ + + ES ++VQ+ W++++ + N ++LVG K D+
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFC-SNLPILLVGCKVDLRND 125
Query: 137 ----EE-----ERVVSAERGRQLADQLGV-EFYETSAKENINVKAVFE 174
EE ++ ++ E G+ +A ++G ++ E SAK N V VFE
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFE 173
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 73.7 bits (173), Expect = 2e-14
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
KL+I+G+ + GKT L ++ +F +V TV ++ V V + V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQVILVGNKCDM--- 136
Y + Y + ++ + + + +S ++VQ+ W++++ + + ++LV K D+
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFC-SSLPILLVACKADLRND 125
Query: 137 ----EE-----ERVVSAERGRQLADQLGV-EFYETSAKENINVKAVFE 174
EE + V+ E G+ +A ++G ++ E SAK N V+ VFE
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFE 173
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 73.7 bits (173), Expect = 2e-14
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFR-HDKRVKLQIWDTAGQE 79
KL+++G+ GKT L ++ +F +V TV ++ + + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 80 RYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWVTQIKTYSWDNAQVILVGNKCDMEE 138
Y + Y + +L + I S N+V + W +++ + ++LVG K D+ +
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFC-PRTPIVLVGLKADLRK 134
Query: 139 ER------------VVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDK 183
+R V+ ++ + +A + + E SAKEN V VF+ V + K
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAVGLTIKK 191
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 70.5 bits (165), Expect = 2e-13
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
K +++G+ +VGKT L Y + F S +V TV ++ V TV D+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMEEE 139
Y + Y F++ + +T+ SF +V++ W ++ + ++VG + D+ ++
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDLRDD 122
Query: 140 RVV------------SAERGRQLADQLG-VEFYETSAKENINVKAVFERLV 177
V + E+G +LA +LG V++ E SA +K VF+ +
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAI 173
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 67.7 bits (158), Expect = 1e-12
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
K++I+G+ + GKTS L + F + T+ ++ + +F ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 81 YRTITTAYYRGAMGFILMYDITNEESF-NSVQDWVTQIKTYSWDNAQVILVGNKCDM--- 136
Y + + Y ++ + + + +S N + W+ ++ + + +++LV KCD+
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSS-NCPGVKLVLVALKCDLRGA 132
Query: 137 EEE-----RVVSAERGRQLADQL-GVEFYETSAKENINVKAVF 173
+EE +++ E G A ++ V + E SAK N V F
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF 175
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 66.5 bits (155), Expect = 3e-12
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
KL+++G+ + GKTS L + F + +V TV ++ V K V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQ-DWVTQIKTYSWDNAQVILVGNKCDMEEE 139
Y + Y A ++ + I + +S +V W+ +I T N ILVG K D+ +
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLRSD 127
Query: 140 RVVSAERGRQ 149
V E R+
Sbjct: 128 PVAIEEMRRR 137
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 49.2 bits (112), Expect = 5e-07
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
++L++G + GKT+ L++ + V+ + F V+TV K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKL---KLNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSV-QDWVTQIKTYSWDNAQVILVGNKCDM 136
R + Y+ G G I + D + + Q+ I + ++++ NK D+
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 48.8 bits (111), Expect = 6e-07
Identities = 30/137 (21%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
++L++G + GKT+ L++ + + T+G F V+TV + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETV--EYRNISFTVWDVGGQDK 73
Query: 81 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQ-IKTYSWDNAQVILVGNKCDMEEE 139
R + Y++ G I + D + E + + + + + +A +++ NK D+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLP-- 131
Query: 140 RVVSAERGRQLADQLGV 156
+A ++ D+LG+
Sbjct: 132 ---NAMNAAEITDKLGL 145
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 33.9 bits (74), Expect = 0.019
Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 21 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 80
++L++G + GKT+ L ++ T G F+++T+ + ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVNEVS-PTFG--FQIRTL--EVEGLRFTIWDIGGQKT 72
Query: 81 YRTITTAYYRGAMGFILMY----DITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDM 136
R Y+ I + D+ EE N++Q+ + + K ++++ NK D
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLF---TSILVLANKSD- 128
Query: 137 EEERVVSAERGRQLADQLGVEFYETSAKENINVKAV 172
V A +++ L + Y++S +V A+
Sbjct: 129 ----VSGALSSEEISKILNISKYKSSHWRIFSVSAL 160
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 29.5 bits (63), Expect = 0.40
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 22 LLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDF--KVKTVFRHDKRVKLQIWDTAG 77
L+++G SS+GKT+F+ + + T+ F +DF T+ D++ L I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTN-FRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 122
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 22 LLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERY 81
L+++G G + Y +SF S F+S VG F + FR + Q ++ ++
Sbjct: 36 LVVVGGLQFGYALLVGTYPFNSFLSGFISCVG-QFVITVGFR--MALTQQELQSSSSKKK 92
Query: 82 RTITTAYYRGAMGF 95
+ + Y R + F
Sbjct: 93 SPVVSPYKRAFLEF 106
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 25.4 bits (53), Expect = 6.5
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 24 IIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRT 83
IIGN+ G+T+FL R SFT + ++ F + ++L + ++GQ+R
Sbjct: 35 IIGNTGSGRTTFL-RCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAY 93
Query: 84 ITTAYY 89
+ Y+
Sbjct: 94 YSERYH 99
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 120 YSWDNAQVILVGNKCDMEEERVVSAERGRQLADQLGVEFYETSAKENINVKAV 172
+++ ++V+ + + +ERV + G +L + +G+ E + N +VKAV
Sbjct: 1176 HNYPKSKVVYIAPMKALVKERV--KDWGHRLVEPMGISMIELTGDTNPDVKAV 1226
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/20 (70%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 104 EESFNSVQDWVTQIKT-YSW 122
EESF SV D VTQ KT SW
Sbjct: 292 EESFYSVHDSVTQKKTRTSW 311
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 940,860
Number of Sequences: 5004
Number of extensions: 35435
Number of successful extensions: 131
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 26
length of query: 218
length of database: 2,362,478
effective HSP length: 70
effective length of query: 148
effective length of database: 2,012,198
effective search space: 297805304
effective search space used: 297805304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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