Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000294-TA|BGIBMGA000294-PA|undefined
(232 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 33 0.17
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 33 0.23
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 33 0.23
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 33 0.23
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 30 1.2
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 29 2.1
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 29 2.1
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 29 2.1
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 29 2.1
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 29 2.1
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 29 2.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 8.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 8.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 8.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 8.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 8.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.7
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 153 KFNISDEEKSNKSSSYSQLVIRVQS-VHFHKGRLNVTCVAHVLSIWSSSGVLLL 205
KF++ KS+ ++ Q+ +++QS + FH + C+ H++ W ++ V +L
Sbjct: 23 KFHMVSANKSDVDVTFFQVCVQLQSSICFHFETFELLCLEHIIKFWETTVVNIL 76
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 126 LSIPEAVADVAKETTTSSMPRIEQIANKFNISDEEKSNKSSSYSQLVIRVQSVHFHKGR 184
+ +PE+ +D K T T +E+ + N EE +N + ++ +VQS F GR
Sbjct: 598 IDLPESGSDDGKITVTGKQANVEKAVAQLNKIQEELANVAEESIEIPQKVQSRFFGNGR 656
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEV 68
G C S P++PA+ +TW++NG+ V
Sbjct: 345 GSSANIQCKSLPSNPASQITWIINGRSV 372
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 40 VGDMLRANCTSPPADPAANLTWLLNGQE 67
VGD + NC+ P ++P A + W+L G+E
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWILMGKE 182
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 40 VGDMLRANCTSPPADPAANLTWLLNGQE 67
VGD + NC+ P ++P A + W+L G+E
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWILMGKE 182
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 40 VGDMLRANCTSPPADPAANLTWLLNGQE 67
VGD + NC+ P ++P A + W+L G+E
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWILMGKE 182
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 63 LNGQEVKGLDIPLVDTTYPRKPVITDTSLEDANRIIFSPWDTISGYEDPVTD 114
L+ +E+ LDI + T K +I +T ++ ++ +P+DTI +E +TD
Sbjct: 2548 LSDEEIVNLDIEITLNTANPKGIIFETKRINSGDLLATPYDTIH-HEAKITD 2598
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 63 LNGQEVKGLDIPLVDTTYPRKPVITDTSLEDANRIIFSPWDTISGYEDPVTD 114
L+ +E+ LDI + T K +I +T ++ ++ +P+DTI +E +TD
Sbjct: 2548 LSDEEIVNLDIEITLNTANPKGIIFETKRINSGDLLATPYDTIH-HEAKITD 2598
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 63 LNGQEVKGLDIPLVDTTYPRKPVITDTSLEDANRIIFSPWDTISGYEDPVTD 114
L+ +E+ LDI + T K +I +T ++ ++ +P+DTI +E +TD
Sbjct: 98 LSDEEIVNLDIEITLNTANPKGIIFETKRINSGDLLATPYDTIH-HEAKITD 148
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 118 DIPGNIAVLSIPEAVADVAKETTTSSMPRIEQIANKFNISDEEKSNKSSSYSQLVIRVQS 177
++ G+ ++ ++D ++T ++ NK NI+D EK+ + S+L I +++
Sbjct: 243 EVEGDDTLVLDAVLMSDTKRQTLLDREKTLQSRINKDNINDAEKTKWNDELSKLYIEMEA 302
Query: 178 VHFHK 182
+ K
Sbjct: 303 LQLDK 307
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVK 69
G L+ C +P +DP A LTW +G V+
Sbjct: 125 GTTLQLPCQAPESDPKAELTWYKDGVVVQ 153
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVK 69
G L+ C +P +DP A LTW +G V+
Sbjct: 153 GTTLQLPCQAPESDPKAELTWYKDGVVVQ 181
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVK 69
G L+ C +P +DP A LTW +G V+
Sbjct: 125 GTTLQLPCQAPESDPKAELTWYKDGVVVQ 153
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVK 69
G L+ C +P +DP A LTW +G V+
Sbjct: 125 GTTLQLPCQAPESDPKAELTWYKDGVVVQ 153
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 59 LTWLLNGQEVKGLDIPLVDTTYPRKPVITDTS 90
+ W LNGQ++ G ++ + T R+ +I++ S
Sbjct: 259 IRWFLNGQQISGSEVGMTTTLNNRRLIISNPS 290
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 2185 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 2222
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 1545 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 1582
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 2185 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 2222
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 2185 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 2222
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 1545 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 1582
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 41 GDMLRANCTSPPADPAANLTWLLNGQEVKGLD-IPLVD 77
G+ LR N P ++WLLNGQ + D + +VD
Sbjct: 2185 GEPLRWNLELDGPSPGTEVSWLLNGQPLTKSDTVQVVD 2222
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,998,606
Number of Sequences: 27539
Number of extensions: 244887
Number of successful extensions: 632
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 40
length of query: 232
length of database: 12,573,161
effective HSP length: 79
effective length of query: 153
effective length of database: 10,397,580
effective search space: 1590829740
effective search space used: 1590829740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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