Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000292-TA|BGIBMGA000292-PA|IPR013027|FAD-dependent
pyridine nucleotide-disulphide oxidoreductase,
IPR006258|Dihydrolipoamide dehydrogenase, IPR012999|Pyridine
nucleotide-disulphide oxidoreductase, class I, active site,
IPR001327|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding
region, IPR000815|Mercuric reductase, IPR004099|Pyridine
nucleotide-disulphide oxidoreductase dimerisation region,
IPR001100|Pyridine nucleotide-disulphide oxidoreductase, class I
(496 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39) 268 9e-72
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 106 4e-23
SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46) 90 4e-18
SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0) 64 3e-10
SB_42181| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00013) 48 2e-05
SB_39854| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_3038| Best HMM Match : Pyr_redox_dim (HMM E-Value=4e-37) 44 2e-04
SB_13280| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.019
SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.043
SB_20017| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.057
SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.099
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 35 0.17
SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24) 33 0.53
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.53
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 32 0.92
SB_47500| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-28) 32 1.2
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 31 2.1
SB_13458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_21990| Best HMM Match : DUF828 (HMM E-Value=1.4) 30 4.9
SB_46888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 29 6.5
SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 29 8.6
>SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39)
Length = 387
Score = 268 bits (656), Expect = 9e-72
Identities = 173/378 (45%), Positives = 218/378 (57%), Gaps = 80/378 (21%)
Query: 150 KVEVHGEK-GVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIG 208
KV V+ + E + TKNILIA+GSEVTPFPG+ D +K ++
Sbjct: 59 KVTVYKDDLSTEVIKTKNILIATGSEVTPFPGIEID-----------------EKHIISS 101
Query: 209 AGVIGLELGSVYQRLGADVTAIEFLTSIGGVGIDGEVAKTLQKILSKQGMKFKLGTKVLG 268
G L L +V + L L G +G++ L + S+ G + LG
Sbjct: 102 TGA--LSLSTVPKNL--------VLIGAGVIGVE------LGSVWSRLGANVT-AVEFLG 144
Query: 269 -VKKEGSTIKVDVEAAKGGNK-EVLDCDVVLISIGRRPYTKGLGLDKVGIALDDRGRIPV 326
+ G +++ VE+AK G+K E L+ DV+L+ IGRRPYT LGL+KVGI LD RGR+ V
Sbjct: 145 HIGGIGIDMEISVESAKDGSKKEELEADVLLVCIGRRPYTTRLGLEKVGIPLDSRGRVVV 204
Query: 327 NNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGI-------------------------VCV 361
N KFQT VP IYAIGD IHGPMLAHKAEDE + + +
Sbjct: 205 NEKFQTNVPNIYAIGDCIHGPMLAHKAEDEAMLEDPAYFAGTSRGHYRKVTGSSNMTISI 264
Query: 362 EGIKGM---PVHFNYDAIPSVIYTSPEVGWVGKTEEDLKKEGRAYKVGKFPFLANSRAKT 418
++GM VH +Y+ +P+V+YT P G YKVGKFP ANSRA+T
Sbjct: 265 ICVEGMNGGAVHIDYNCVPNVVYTHP---------------GVEYKVGKFPMSANSRART 309
Query: 419 NGETEGFVKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCA 478
N E +G VKVL DK TD +LG H+I PG GELINEA LA EYGA+ ED+ARVCHAHPT +
Sbjct: 310 NAEIDGMVKVLGDKETDRLLGVHMICPGAGELINEAALAMEYGASCEDIARVCHAHPTVS 369
Query: 479 EALREANLAAYSGKPINF 496
EA REANLAAY+GK INF
Sbjct: 370 EAFREANLAAYAGKAINF 387
Score = 55.6 bits (128), Expect = 9e-08
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 18 LVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 63
+ R ++ + DLVVIGSGPGGYVAAIKAAQLGMK V+V KD
Sbjct: 21 ITRQKVLHFSLLGEVDLVVIGSGPGGYVAAIKAAQLGMK-VTVYKD 65
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 106 bits (255), Expect = 4e-23
Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 18/299 (6%)
Query: 118 NAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTP 177
N + L G + ++ V G + + ++ ++G ET+ T + +
Sbjct: 686 NHIGSLNWGYRVQLREKSVTYKNAFGEFIDNHTIKATDKRGTETIMTAETFVLAMGLRPR 745
Query: 178 FPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIG 237
+P + ++ ITS SL P ++IGA + LE +G DVT + + SI
Sbjct: 746 YPNIPGAKEYGITSDDLFSLPYCPGTTVLIGASYVSLECAGFLAAMGLDVTVV--VRSIL 803
Query: 238 GVGIDGEVAKTLQKILSKQGMKFK---LGTKVLGVKKEGSTIKVDVE-AAKGGNKEVLDC 293
G D ++A+ + G+KFK + TKV + +EGS K+ V +GG + LDC
Sbjct: 804 LRGFDQQMAEKAGSFMETHGVKFKRPAVPTKVEQL-EEGSPGKLRVHYKLEGGEEGHLDC 862
Query: 294 DVVLISIGRRPYTKGLGLDKVGIALDDRG-RIPVNNKFQTTVPGIYAIGDVIHGPM-LAH 351
+ V+ +IGR T G+GL+KVG+ L+ + ++ + Q++VP IYAIGD++ G + L
Sbjct: 863 NTVVFAIGRDACTTGIGLEKVGVKLNPKNQKVIAGDNEQSSVPNIYAIGDILDGKLELTP 922
Query: 352 KAEDEGIVCVEGI-----KGM-P--VHFNYDAIPSVIYTSPEVGWVGKTEED-LKKEGR 401
A G + + K M P + +Y + + ++T E G +G +EED ++K G+
Sbjct: 923 VAIQAGRLLSRRLYRNDTKLMFPDLLQCDYINVATTVFTPLEYGAIGYSEEDAIQKFGQ 981
>SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46)
Length = 320
Score = 89.8 bits (213), Expect = 4e-18
Identities = 40/59 (67%), Positives = 47/59 (79%)
Query: 33 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMA 91
D+++IG GPGGY AAI+A QLG+KV +E TLGGTCLNVGC+PSKALLH S LY A
Sbjct: 259 DVLIIGGGPGGYNAAIRAGQLGLKVACIEGRETLGGTCLNVGCMPSKALLHASELYEAA 317
>SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0)
Length = 394
Score = 63.7 bits (148), Expect = 3e-10
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 132 QKNKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITS 191
+K V+ V G V+V G + + K+ILIA+G V P + E I TS
Sbjct: 96 KKAHVDFVAGHAQFTPDGNVKV----GDQLFSGKHILIATGG-VPSLPSIPGFEHGI-TS 149
Query: 192 TGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIGGVGIDGEVAKTLQK 251
G LE +PKK+ V+GAG I +EL + LG+ V+ + ++ D ++ L +
Sbjct: 150 DGFFELEDLPKKVAVVGAGYIAVELAGILNALGSRVSLLIRYNNVIR-NFDSMLSGMLTE 208
Query: 252 ILSKQGMKFKLGTKVLGVKKEGSTIKVDVEAAKGGNKEV--LDCDVVLISIGRRPYTKGL 309
+ G+ T V K+ +T + + K ++V D +L ++GR P T L
Sbjct: 209 EIKDSGIDLCTNTTTEQVSKDSNTGLLTLHTLKNKTEKVDLSGYDCLLWAMGRNPNTNNL 268
Query: 310 GLD 312
GL+
Sbjct: 269 GLE 271
Score = 61.3 bits (142), Expect = 2e-09
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 17 SLVRIATR-QYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGC 75
S +RI+ R A D VVIG G GG +A +AA+ G+K V +E LGGTC+NVGC
Sbjct: 35 SQMRISLRLMMAAVKAYDYVVIGGGSGGIASARRAAEFGVKAVVIE-HARLGGTCVNVGC 93
Query: 76 IPSKALLHNSHLYHMAKH-DFKQRG-IETGEVTFDFKKMM 113
+P KA H+ +A H F G ++ G+ F K ++
Sbjct: 94 VPKKA-----HVDFVAGHAQFTPDGNVKVGDQLFSGKHIL 128
Score = 56.4 bits (130), Expect = 5e-08
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 372 NYDAIPSVIYTSPEVGWVGKTEEDLKKE-GR-AYKVGKFPFLANSRAKTNGETEGFVKVL 429
+Y IP+V+++ P +G +G TEE ++ G+ K+ K F+ A T+ + + +K++
Sbjct: 279 DYVNIPTVVFSHPTIGTIGLTEEQAAQQYGKDKLKIYKSTFVNMYYAVTDKKHKTHMKLI 338
Query: 430 SDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEAL 481
+ + ++G HI+G G E++ +A + GA D HPT +E L
Sbjct: 339 TLLPEEKVIGLHILGLGADEMLQGFAVAIKMGATKADFDNAVAIHPTSSEEL 390
>SB_42181| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.00013)
Length = 201
Score = 47.6 bits (108), Expect = 2e-05
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 202 KKMLVIGAGVIGLELGSVYQRLGAD-VTAIEFLTSIGGVGIDGEVAKTLQKILSKQGMKF 260
K+++V+G G ++ R GA VT G EV K ++G++F
Sbjct: 17 KRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREV-----KNAREEGVEF 71
Query: 261 KLGTKVLGVKKEG----STIK-VDVEA----AKG--------GNKEVLDCDVVLISIGRR 303
K + LG++ G S +K V E AKG G++ ++ D V+++ G R
Sbjct: 72 KFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFR 131
Query: 304 PYTKGLGLDKVGIALDDRGRIPV----NNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIV 359
P+ L K + LD +GRI +N FQT+ P I+A GD++ G L A EG
Sbjct: 132 PHNMEW-LAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRK 190
Query: 360 CVEGI 364
+GI
Sbjct: 191 AADGI 195
>SB_39854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 46.4 bits (105), Expect = 5e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 217 GSVYQRLGADVTAIEFLTSIGGVGIDGEVA 246
GSV+ RLGA+VTA+EFL IGG+GID E++
Sbjct: 1 GSVWSRLGANVTAVEFLGHIGGIGIDMEIS 30
>SB_3038| Best HMM Match : Pyr_redox_dim (HMM E-Value=4e-37)
Length = 128
Score = 44.4 bits (100), Expect = 2e-04
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 376 IPSVIYTSPEVGWVGKTEED-LKKEGRAYKVGKFPFLA--NSRAKTNGETEGFVKVLSDK 432
I + ++T E VG +EED +++ G F R E G++K + +
Sbjct: 1 IATTVFTPLEYSTVGLSEEDAIRQYGEENLEVYHAFYKPLEFRVTEREEDVGYIKAVCLR 60
Query: 433 TTDV-ILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 491
+ ++G H +GP GE++ +A G ++ HPTCAE + + ++ SG
Sbjct: 61 EGEQSVIGLHYLGPNAGEVMQGFAVAIRCGLTMRMLSSTVGIHPTCAEEVVKLHITKRSG 120
Query: 492 K 492
+
Sbjct: 121 E 121
>SB_13280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 295 VVLISIGRRPYTKGLGLDKVGIALDDRGRIPVNNKFQTTVPGIYAIGDVI 344
+ +I + R P T L LDK G+ +D G I QT+ IYA+GDV+
Sbjct: 132 IAIIIVRRDPSTAALELDKAGVQVDKSGFIIGMENEQTSAKNIYALGDVL 181
>SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 37.9 bits (84), Expect = 0.019
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 263 GTKVLGVKKEGSTIKVDVEAAKGGNKEV-------LDCDVVLISIGRR--PYTKGLGLD- 312
GT V G++ + + + VE AKG + V + C +VL SIG + P + + D
Sbjct: 36 GTGVAGIRLQVNKL---VEGAKGSVRAVGTDVTEDISCGIVLRSIGYKSQPIDESIPFDH 92
Query: 313 KVGIALDDRGRIPVNNKFQTTVPGIYAIGDVIHGPM 348
K G+ ++GR+ ++ VPG+Y G V HGP+
Sbjct: 93 KRGVIPTNKGRV-ISLTGGAIVPGLYCSGWVGHGPV 127
>SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 36.7 bits (81), Expect = 0.043
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 31 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTC 70
+ D VVIGSG GG A A+ G K++ +E+ GG C
Sbjct: 85 EVDAVVIGSGIGGMTCASLLAKTGKKILVLEQHDQAGGCC 124
>SB_20017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 36.3 bits (80), Expect = 0.057
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 287 NKEVLDCDVVLISIGRRPYTKGLGLDKVGIALDDRGRIPVNNKFQTTVPGIYAIGDV 343
N + CD V+ + G P + L G L + G I V+ +T +P +YA GDV
Sbjct: 190 NNRIYGCDFVVSATGVTPNVEPF-LGCGGFELGEDGGIKVDKNMKTNIPDVYAAGDV 245
>SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 35.5 bits (78), Expect = 0.099
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 289 EVLDCDVVLISIGRR--PYTKGLGLD-KVGIALDDRGRIPVNNKFQTTVPGIYAIGDVIH 345
E + C +VL SIG + P + + D K G+ ++GR+ ++ VPG+Y G V H
Sbjct: 15 EDISCGIVLRSIGYKSQPIDESIPFDHKRGVIPTNKGRV-ISLTGDAIVPGLYCSGWVGH 73
Query: 346 GPM 348
GP+
Sbjct: 74 GPV 76
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 34.7 bits (76), Expect = 0.17
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 11/178 (6%)
Query: 48 IKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLY--HMAKHDFKQRGIETGEV 105
IKA G+ V S +K L L + S L ++ L A+H I+T
Sbjct: 97 IKAKMFGITVFSEDKTGQLALAHLTCSDMVSMGLPGSTWLAWGSQARHAHGSHDIDTVLK 156
Query: 106 TFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEVHGEKGVETVNTK 165
+F + + ++ ++ M+ +V + G G A + G KGV T+ K
Sbjct: 157 GVNFDPVFDSESELASKVSHLAEMIRAAKRVVVHTGAGVSTAAGIPDFRGPKGVWTLEEK 216
Query: 166 NILIASGSEVTPFPGVTFDE-KQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQR 222
I TP V+FD +T + L+ VI V GL L S Y R
Sbjct: 217 GI--------TPKIDVSFDSAAPTLTHMAIVKLQEEGLVHYVISQNVDGLHLKSGYPR 266
>SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24)
Length = 284
Score = 33.1 bits (72), Expect = 0.53
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 34 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 62
++VIGSGP G +A++AA LG +V+ +EK
Sbjct: 63 VLVIGSGPCGLRSALEAALLGAQVMVIEK 91
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 33.1 bits (72), Expect = 0.53
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 203 KMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIGG 238
K++++G+G+ GL Q G DVT +E +GG
Sbjct: 252 KVIIVGSGIAGLMAARQLQSFGIDVTMVEARERVGG 287
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 28 TTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 62
T ++VIG+GP G AI+ A LG +VV VEK
Sbjct: 551 TCEHLQVLVIGAGPIGLRTAIEMALLGAQVVVVEK 585
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 203 KMLVIGAGVIGLELGSVYQRLGADVTAIEFLTS 235
++LVIGAG IGL LGA V +E TS
Sbjct: 556 QVLVIGAGPIGLRTAIEMALLGAQVVVVEKRTS 588
>SB_47500| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-28)
Length = 961
Score = 31.9 bits (69), Expect = 1.2
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 140 KGVGTIV--APNKVEVHG--EKGVETVNTKNILIASGSEV-TPFPGVTFDEKQIITSTGA 194
+GVGT V N+ E G ++GV T + + L EV T GV D++ + T
Sbjct: 676 EGVGTDVKGVGNEDEGLGTDDEGVGTDDKE--LGTDNEEVGTDDEGVGTDDEGVGTDDEG 733
Query: 195 LSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIGGVGIDGEVAKTLQKILS 254
L + G G +G+ + LG D + T GVG D + T + +
Sbjct: 734 LGTDDEGVGTDDEGVGTDDEGVGTDDEGLGTDDEGVG--TDDEGVGTDNKGVWTDDEGVG 791
Query: 255 KQGMKFKLGTKVLGVKKEGSTIKVDVEAAKGGNK-EVLDCDVVLISIGRRPYTKGLGLDK 313
LGT GV+ + ++ D E + ++ E D V G R +GLG D
Sbjct: 792 TDDEG--LGTDDEGVRTDDEGVRTDDEGVRTDDEGERTDDGVGTDDEGVRTDDEGLGTDD 849
Query: 314 VGIALDDRG 322
G+ DD G
Sbjct: 850 KGVRTDDEG 858
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 262 LGTKVLGVKKEGSTIKVDVEAAKGGNKEVLDCDVVLISIGRRPYTKGLGLDKVGIALDDR 321
LGT GV+ + ++ D E + ++ V D G R +GLG D G+ DD
Sbjct: 845 LGTDDKGVRTDDEGVRTDDEGVRTDDEGVRTDDE-----GVRTDDEGLGTDDKGVRTDDE 899
Query: 322 GRIPVNNKFQTTVPGIYAIGDVIHGP 347
G + +T V + V+H P
Sbjct: 900 GVRTDDEGVRTDVVATSGVLVVLHCP 925
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 31.1 bits (67), Expect = 2.1
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 173 SEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEF 232
+E+T + V K+ T A+S+ S ++ AG +G+ L + +GA + I
Sbjct: 110 NEITHYRQVRKKYKRAFAVTHAVSVASGVAAGVLSSAG-LGVSLSGIGVLIGAPLAGIAG 168
Query: 233 LTSIGGVGIDGEVAKTLQKILSKQGMKFKLGTKVLGVKKEGSTIKVDVEAAKGGNKEVLD 292
L + G G G V++ L ++K T VL K+ S ++ +A + G + D
Sbjct: 169 LVGVVGAGA-GVVSRGLTSKVAKHE-----DTMVLAESKKNSISQLVSKALQDG--RISD 220
Query: 293 CDVVLISIGRRPYT--KGLGLDKVGIALDDR 321
+ LI G+ Y K + G+AL D+
Sbjct: 221 EEFRLILQGQERYNALKAAIRARHGLALHDK 251
>SB_13458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 31 DADLVVIGSGPGGYVAAIKAAQL 53
+AD+V++G GP G A+IK QL
Sbjct: 7 EADVVIVGGGPAGLSASIKLKQL 29
>SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 201 PKKMLVIGAGVIGLELGSVYQRLGADVTAIE 231
P KMLVIG GV GL + + +GA V A +
Sbjct: 158 PAKMLVIGGGVAGLSAMAHAKNMGAIVRAFD 188
>SB_21990| Best HMM Match : DUF828 (HMM E-Value=1.4)
Length = 415
Score = 29.9 bits (64), Expect = 4.9
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 170 ASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTA 229
A +E+T + V K+ T A+S+ S + AG +G+ L + +GA +T
Sbjct: 256 ALDNEITHYRQVRKKYKRAFAVTHAVSVASGIAAGALSSAG-LGVSLSGIGVLIGAPLTG 314
Query: 230 IEFLTSIGGVGIDGEVAKTLQKILSKQGMKFKLGTKVLGVKKEGSTIKVDVEAAKGGN 287
+ L + G G G V++ L ++K T VL K+ S ++ +A + G+
Sbjct: 315 VAVLVGVVGAGA-GVVSRGLTSKVAKHE-----DTMVLAESKKNSISELVSKALQDGH 366
>SB_46888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 29.5 bits (63), Expect = 6.5
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 31 DADLVVIGSGPGGYVAAIKAAQLGMK-VVSVEKDPTLGGTCLNVG 74
DA++V+IG G G A A+ G+K VV +EK G+ + G
Sbjct: 288 DAEVVIIGGGCLGVSTAYHLAKRGLKDVVLLEKSELTAGSTWHAG 332
>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
Length = 1021
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 203 KMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIGG 238
K+L++GAGV G+ SV G +E IGG
Sbjct: 41 KVLILGAGVAGIAAASVLHEEGVGFIVLEAKDYIGG 76
>SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 31 DADLVVIGSGPGGYVAAIKAAQLGMK-VVSVEKDPTLGGT 69
+AD+VVIG G G ++G+K V+ +E+D GT
Sbjct: 108 EADVVVIGGGSVGTSTLYHLTKMGVKNVILLERDKLTSGT 147
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 238 GVG-IDGEVAKTLQKILSKQGMKFKLGTKVLGVKKEGSTIKVDVEAAKGGNKEVLDCDVV 296
G+G I G + +LQ ++QG++ K +GV VD+E ++E CD+
Sbjct: 296 GLGRIQGAITLSLQYSKTRQGIERKKSVNSVGV------FGVDIETVT--SRE--SCDIP 345
Query: 297 LISIGRRPYTKGLGLDKVGI 316
LI IG + GL++VGI
Sbjct: 346 LIVIGCVREIEKRGLEEVGI 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.137 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,722,216
Number of Sequences: 59808
Number of extensions: 659040
Number of successful extensions: 1274
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1224
Number of HSP's gapped (non-prelim): 45
length of query: 496
length of database: 16,821,457
effective HSP length: 85
effective length of query: 411
effective length of database: 11,737,777
effective search space: 4824226347
effective search space used: 4824226347
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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