Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000292-TA|BGIBMGA000292-PA|IPR013027|FAD-dependent
pyridine nucleotide-disulphide oxidoreductase,
IPR006258|Dihydrolipoamide dehydrogenase, IPR012999|Pyridine
nucleotide-disulphide oxidoreductase, class I, active site,
IPR001327|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding
region, IPR000815|Mercuric reductase, IPR004099|Pyridine
nucleotide-disulphide oxidoreductase dimerisation region,
IPR001100|Pyridine nucleotide-disulphide oxidoreductase, class I
(496 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 567 e-162
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 160 5e-40
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 53 8e-08
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 37 0.007
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 31 0.37
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 31 0.49
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.85
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 29 1.1
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 29 1.1
SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic enzyme|Schizosaccha... 29 2.0
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 28 2.6
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 28 2.6
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 28 3.4
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 27 6.0
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 27 7.9
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 567 bits (1400), Expect = e-162
Identities = 268/479 (55%), Positives = 352/479 (73%), Gaps = 3/479 (0%)
Query: 20 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSK 79
R+ + + + + DL VIG GPGGYVAAI+ AQLG+K + VEK TLGGTCLNVGCIPSK
Sbjct: 34 RLYSAKASGNGEYDLCVIGGGPGGYVAAIRGAQLGLKTICVEKRGTLGGTCLNVGCIPSK 93
Query: 80 ALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLV 139
ALL+NSH+YH KHD K+RGI+ V+ + +MM+ K ++VK LT GI LF+KNKV
Sbjct: 94 ALLNNSHIYHTVKHDTKRRGIDVSGVSVNLSQMMKAKDDSVKSLTSGIEYLFKKNKVEYA 153
Query: 140 KGVGTIVAPNKVEVHGEKGV--ETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSL 197
KG G+ + P + V G G +T+ KN +IA+GSEV PFPGVT DEK+I++STGALSL
Sbjct: 154 KGTGSFIDPQTLSVKGIDGAADQTIKAKNFIIATGSEVKPFPGVTIDEKKIVSSTGALSL 213
Query: 198 ESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLTSIGGVGIDGEVAKTLQKILSKQG 257
VPKKM V+G G+IGLE+GSV+ RLGA+VT +EFL ++GG +D +++K L +I+SKQG
Sbjct: 214 SEVPKKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGP-MDADISKALSRIISKQG 272
Query: 258 MKFKLGTKVLGVKKEGSTIKVDVEAAKGGNKEVLDCDVVLISIGRRPYTKGLGLDKVGIA 317
+KFK TK+L K G +++V++E K +E DV+L++IGR PYT+GLGLDK+GI+
Sbjct: 273 IKFKTSTKLLSAKVNGDSVEVEIENMKNNKRETYQTDVLLVAIGRVPYTEGLGLDKLGIS 332
Query: 318 LDDRGRIPVNNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIVCVEGIKGMPVHFNYDAIP 377
+D R+ ++++++T +P I IGD GPMLAHKAEDEGI VE I H NY+ IP
Sbjct: 333 MDKSNRVIMDSEYRTNIPHIRVIGDATLGPMLAHKAEDEGIAAVEYIAKGQGHVNYNCIP 392
Query: 378 SVIYTSPEVGWVGKTEEDLKKEGRAYKVGKFPFLANSRAKTNGETEGFVKVLSDKTTDVI 437
+V+YT PEV WVG TE+ K+ G Y++G FPF ANSRAKTN + +G VKV+ D TD +
Sbjct: 393 AVMYTHPEVAWVGITEQKAKESGIKYRIGTFPFSANSRAKTNMDADGLVKVIVDAETDRL 452
Query: 438 LGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSGKPINF 496
LG H+IGP GELI EA LA EYGA+AEDVARVCHAHPT +EA +EA +AA+ GK I+F
Sbjct: 453 LGVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAAWCGKSIHF 511
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 160 bits (388), Expect = 5e-40
Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 31/466 (6%)
Query: 33 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 92
D +VIG G GG +A +AA+ G KV +E LGGTC+N GC+P K + + + L K
Sbjct: 9 DYLVIGGGSGGLASARRAAKHGAKVALIEASGRLGGTCVNYGCVPKKIMWNIADLVAKMK 68
Query: 93 HDFKQRGIETGEV-TFDFKKMMEYKANAVKGLTGGI-AMLFQKNKVNLVKGVGTIVAPNK 150
KQ G ++ +FD+ M++ K +A G GI K+ V + G + V+P +
Sbjct: 69 -TAKQNGFPNSQLGSFDW-GMIKRKRDAYIGRLNGIYERNVNKDGVAYISGHASFVSPTE 126
Query: 151 --VEVHGEKGVETVNTKNILIA-SGSEVTP--FPGVTFDEKQIITSTGALSLESVPKKML 205
V+++ G + + K ILIA G + P PG + I S G LES PK++
Sbjct: 127 VAVDMNDGSGTQVFSAKYILIAVGGHPIWPSHIPGAEYG----IDSDGFFELESQPKRVA 182
Query: 206 VIGAGVIGLELGSVYQRLGAD----VTAIEFLTSIGGVGIDGEVAKTLQKILSKQGMKFK 261
++GAG I +EL V+ LG + + +FL + DG + Q I
Sbjct: 183 IVGAGYIAVELAGVFAALGTETHMFIRQSKFLRKFDPIISDG-IMDHFQHI------GIN 235
Query: 262 LGTKVLGVKKEGSTIKVDVEAAKGGNKEVLDCDVVLISIGRRPYTKGLGLDKVGIALDDR 321
+ T L KK ++ + + D +L +IGR P +GL L+K G+
Sbjct: 236 VHTNSLEFKKVEKLPSGEL-CIHQQDGSTFNVDTLLWAIGRAPKIQGLRLEKAGVKTLPN 294
Query: 322 GRIPVNNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIVCVEGIKG--MPVHFNYDAIPSV 379
G I + +T VP + ++GDV L A G + + G H +Y+ +PSV
Sbjct: 295 GIIIADTYQRTNVPTVLSLGDVCGKLELTPVAIAAGRRLSDRLFGGIKDAHLDYEEVPSV 354
Query: 380 IYTSPEVGWVGKTEED-LKKEGRA-YKV--GKFPFLANSRAKTNGETEGFVKVLSDKTTD 435
++ PE G +G TE++ + K G + KV KF L S + + K++
Sbjct: 355 VFAHPEAGTIGLTEQEAIDKYGESQIKVYNTKFNGLNYSMVEQEDKVPTTYKLVCAGPLQ 414
Query: 436 VILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEAL 481
++G H++G E++ +A + GA D HPT AE L
Sbjct: 415 KVVGLHLVGDFSAEILQGFGVAIKMGATKSDFDSCVAIHPTSAEEL 460
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 53.2 bits (122), Expect = 8e-08
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 161 TVNTKNILIASGSEVTPFPGVTFDEKQII--------TSTGALSLESVPKK-MLVIGAGV 211
T + +++A+G E P D K + + A++ E+ KK +++IG+
Sbjct: 252 TESYTKLILATGGEPNKLPIPGLDSKNVYLLRSIADASKLAAVTTEAGDKKNIVIIGSSF 311
Query: 212 IGLELGSVYQRLGADVTAIEFLTSIGGVGIDGEVAKTLQKILSKQGMKFKLGTKVLGVK- 270
IGLEL V + V +E + +G EV L+ + + G+ F L + VK
Sbjct: 312 IGLELAVVLKDHNVSVIGMESIPFEKVMG--KEVGTALKALHEQNGIAFYLENSIKEVKT 369
Query: 271 KEGSTIKVDVEAAKGGNKEVLDCDVVLISIGRRPYTKGLGLDKVGIALDDRGRIPVNNKF 330
+ K + K G + + DVV+++ G +P + LG ++L+ G + V+
Sbjct: 370 SSNDSSKAEHIVLKDG--QSIPADVVILAAGVKPNLRYLG---NAVSLEKDGGVKVDEHC 424
Query: 331 QTT-VPGIYAIGDVIHGP 347
+ +YA+GD+ H P
Sbjct: 425 RVLGAEDVYAVGDIAHAP 442
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 36.7 bits (81), Expect = 0.007
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 287 NKEVLDCDVVLISIG----RRPYTKGLGLDKVGIALDDRGRIPVNNK-FQTTVPGIYAIG 341
++E D+V++++G T G+ +D+ D R I K ++T+VPGIYA G
Sbjct: 2011 SEEFFPADLVILALGFLGPEEQATAGMNVDR-----DARSNISTPTKSYETSVPGIYAAG 2065
Query: 342 DVIHGPMLAHKAEDEGIVCVEGI 364
D G L EG C I
Sbjct: 2066 DCRRGQSLVVWGIQEGRQCAREI 2088
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 34 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 68
+ +IGSGP G AA + + G VV E+ GG
Sbjct: 1758 VAIIGSGPAGLAAADQLNRAGHHVVIYERADRPGG 1792
>SPBC713.12 |erg1||squalene monooxygenase Erg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 31.1 bits (67), Expect = 0.37
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 29 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 63
T DAD+++IG+G G + G KV+ +E+D
Sbjct: 3 TQDADIIIIGAGITGCALGAALGRQGRKVLVLERD 37
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 204 MLVIGAGVIGLELGSVYQRLGADVTAIE 231
+++IGAG+ G LG+ R G V +E
Sbjct: 8 IIIIGAGITGCALGAALGRQGRKVLVLE 35
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 30.7 bits (66), Expect = 0.49
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 289 EVLDCDV--VLISIGRRPYTKGLGLDKVGIALDDRGRIP-VNNKFQTTVPGIYAIGDV 343
EV D V + +IG P TK L I LD+ G I +N +T++PG +A GDV
Sbjct: 235 EVSDLQVNGLFYAIGHIPATK---LVAEQIELDEAGYIKTINGTPRTSIPGFFAAGDV 289
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 29 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 61
TH+ +V+IGSGP G+ AAI A+ +K V E
Sbjct: 2 THNK-VVIIGSGPAGHTAAIYLARGELKPVMYE 33
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 29.9 bits (64), Expect = 0.85
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 374 DAIPSVIY-TSPE----VGWVGKTEEDLKKEGR-AYKVGKFPFLANSRAKTNGETEGFVK 427
DA P+++ T P V WV KT + G + K PF A+SRA + T
Sbjct: 85 DAFPTLLSKTGPSKPRIVSWVRKTASNTSVAGSDSVSRDKIPFSASSRASSTKST----- 139
Query: 428 VLSDKTTDVILGTHIIGP 445
+ S K TD + T I+ P
Sbjct: 140 LSSVKETDFVTETLILSP 157
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 310 GLDKVGIALDDRGRIPVNNKFQTTVPGIYAIGDVIHGPM 348
G+ VG+ DD I V N PGIY G V HGP+
Sbjct: 344 GMKDVGVPFDDAKGI-VKNVNGFVRPGIYTSGWVKHGPI 381
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 11 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 68
P+ S S +T ++ +VIG G G A LG V+ ++K+ GG
Sbjct: 18 PSTNSASFFSTLRFNMSTANNTQAIVIGGGLAGLSATNTILDLGGNVLLLDKNTAFGG 75
>SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 328
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 14 RSGSLVRIATRQYATTHD----ADLVVIGSGPGGYVAA--IKAAQLGMKVVSVEKDPTLG 67
R ++ R TR+Y + D +D+V++G+G G AA I + +K+ +E G
Sbjct: 55 RESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPG 114
Query: 68 G 68
G
Sbjct: 115 G 115
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 195 LSLESVPKKMLVIGAGVIGLELGSVYQRLG 224
++ E+ P+ ++++GAGVIGL + LG
Sbjct: 1 MTKENKPRDIVIVGAGVIGLTTAWILSDLG 30
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 31 DADLVVIGSGPGGYVAAIKAAQLGMK 56
D D+ ++G+GP G AAI+ Q K
Sbjct: 90 DVDVCIVGAGPAGLSAAIRIKQQAAK 115
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 18 LVRIATRQYATTHDA--DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 62
+ R R + T+ + ++VVIG G G AA A++LG K + K
Sbjct: 1 MFRTTKRYFCTSFNRRKNVVVIGGGHAGVEAAAAASRLGAKTTLLTK 47
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 202 KKMLVIGAGVIGLELGSVYQRLGADVTAI 230
K ++VIG G G+E + RLGA T +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLL 45
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 347 PMLAHKAEDEGIVCVEGIKG-MPVHFNYDAIPSVIYT 382
P L H+A+ V EG+ G + F DA P + YT
Sbjct: 250 PDLLHRAQSRAFVSGEGVPGPIEYFFASDATPIIEYT 286
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 159 VETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGS 218
VE ++T + LI S PFP + + +I ++ KK+ +G S
Sbjct: 472 VEQIDTTHYLIGSAIGPHPFPTIVKTFQSVIGEETKAQMQEKRKKLPDAVVACVGGGSNS 531
Query: 219 V--YQRLGADVTAIEFLTSIGGVGID 242
+ + AD + + GG G+D
Sbjct: 532 IGMFSPFKADKSVMMLGCEAGGDGVD 557
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.137 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,146,981
Number of Sequences: 5004
Number of extensions: 91307
Number of successful extensions: 214
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 25
length of query: 496
length of database: 2,362,478
effective HSP length: 76
effective length of query: 420
effective length of database: 1,982,174
effective search space: 832513080
effective search space used: 832513080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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