GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000291-TA|BGIBMGA000291-PA|IPR002076|GNS1/SUR4 membrane
protein
         (283 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   2.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.6  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   5.6  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   5.6  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   5.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   7.5  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 62  LKQVLIWYNLFQVIFSCWLFYETVNGCW 89
           L+  L+   +  V+F+ WL      GCW
Sbjct: 373 LRHFLLQLTIVAVLFAHWLTTRPPTGCW 400


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 228 QAYLRKSKKAKSMMKVEDEPVKYETKEMKLPLLNGFSNGSAL 269
           Q+ +RK    ++ ++ E   ++ E +EMKL +       S++
Sbjct: 948 QSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSI 989


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 165 GPQVQKYLWWKKYLTAL 181
           GP++++  +WKKYL  L
Sbjct: 677 GPRLRQCAFWKKYLPQL 693


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 165 GPQVQKYLWWKKYLTAL 181
           GP++++  +WKKYL  L
Sbjct: 677 GPRLRQCAFWKKYLPQL 693


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 165 GPQVQKYLWWKKYLTAL 181
           GP++++  +WKKYL  L
Sbjct: 563 GPRLRQCAFWKKYLPQL 579


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 246 EPVKYETKEMKLPLLNGFSNGSALGD 271
           E   Y     ++ LL G  NGS LGD
Sbjct: 16  EDYGYGRSSQQMLLLTGRQNGSTLGD 41


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.330    0.141    0.469 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,121
Number of Sequences: 2123
Number of extensions: 10848
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 6
length of query: 283
length of database: 516,269
effective HSP length: 63
effective length of query: 220
effective length of database: 382,520
effective search space: 84154400
effective search space used: 84154400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 47 (23.0 bits)