Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000291-TA|BGIBMGA000291-PA|IPR002076|GNS1/SUR4 membrane
protein
(283 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61954-11|AAK29807.1| 274|Caenorhabditis elegans Fatty acid elo... 63 2e-10
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 58 9e-09
U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid elon... 54 9e-08
Z19154-4|CAA79555.1| 291|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 47 1e-05
U61954-8|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 42 5e-04
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 31 1.2
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 31 1.2
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 31 1.2
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 29 4.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 28 6.5
AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical ... 28 6.5
>U61954-11|AAK29807.1| 274|Caenorhabditis elegans Fatty acid
elongation protein 6 protein.
Length = 274
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 81 FYETVNGC--WWYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPG 138
FY ++G W + ++RKK + LH HH ++ M+ F
Sbjct: 104 FYNGLSGMFTWLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHH-VLTMNYAFMSFEANL 160
Query: 139 GHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLLF 198
G +T+ +N VH +MY YY+L + G +V W K +T +Q++QFV+ F + +
Sbjct: 161 GFNTWITWMNFSVHSIMYGYYMLRSFGVKVP--AWIAKNITTMQILQFVITHFILFHVGY 218
Query: 199 I-----DCDYPRAFVWWIGMHAVLFYYLFSDFYKQAYLR-KSKKAKSMMKVE 244
+ D + W+ + + + LF +FY Q+Y++ KK + K E
Sbjct: 219 LAVTGQSVDSTPGYYWFCLLMEISYVVLFGNFYYQSYIKGGGKKFNAEKKTE 270
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 57.6 bits (133), Expect = 9e-09
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 81 FYETVNGCW-WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPGG 139
F + NG W W + ++ +K + LH HH + + W+ TPG
Sbjct: 118 FTKGENGYWVWLFMASKLFELVDTIFLVLRKRP-LMFLHWYHHILTMIYAWYSHPLTPGF 176
Query: 140 HSTFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL---VFIHAFQ 195
+ +G+ LN VH MYSYY L ++ +V ++ + +T+LQ+VQF++ V H
Sbjct: 177 NR--YGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVLAHLGY 232
Query: 196 LLFI---DCDY-PRAFVWWIGMHAVLFYYLFSDFYKQAYLRKSKKAK 238
L+ +CD+ P F + M + LF +F+ Q+Y+ + K K
Sbjct: 233 LMHFTNANCDFEPSVFKLAVFMDTT-YLALFVNFFLQSYVLRGGKDK 278
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 57.6 bits (133), Expect = 9e-09
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 81 FYETVNGCW-WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPGG 139
F + NG W W + ++ +K + LH HH + + W+ TPG
Sbjct: 118 FTKGENGYWVWLFMASKLFELVDTIFLVLRKRP-LMFLHWYHHILTMIYAWYSHPLTPGF 176
Query: 140 HSTFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL---VFIHAFQ 195
+ +G+ LN VH MYSYY L ++ +V ++ + +T+LQ+VQF++ V H
Sbjct: 177 NR--YGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVLAHLGY 232
Query: 196 LLFI---DCDY-PRAFVWWIGMHAVLFYYLFSDFYKQAYLRKSKKAK 238
L+ +CD+ P F + M + LF +F+ Q+Y+ + K K
Sbjct: 233 LMHFTNANCDFEPSVFKLAVFMDTT-YLALFVNFFLQSYVLRGGKDK 278
>U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid
elongation protein 3 protein.
Length = 320
Score = 54.4 bits (125), Expect = 9e-08
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 41/260 (15%)
Query: 33 FPTLAICLTYVFIVKVLGPKLMENRKPFELKQVLIWYNLFQVIFSCWLFYETVNGCWWYY 92
+ ++ + YV ++ G K+ME KPF+L L +N F IFS F W +
Sbjct: 39 YQSITASVVYVAVI-FTGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLRMTPEFVWSW 97
Query: 93 XXXXXXXXX---------------XXXXVMRKKFDHVSKLHVI------------HHGIM 125
M K F+ + + ++ HH +
Sbjct: 98 SAEGNSFKYSICHSSYAQGVTGFWTEQFAMSKLFELIDTIFIVLRKRPLIFLHWYHHVTV 157
Query: 126 PMSVWFGVK-FTPGGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMV 184
+ W K T G +F +N VH +MYSYY L +L ++ K + +T LQ+
Sbjct: 158 MIYTWHAYKDHTASGR--WFIWMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTTLQLA 213
Query: 185 QFVLVFIHAFQLLFIDCDYPRAFVWW--IGM-HAVLFYY--LFSDFYKQAYLRKSKK--- 236
Q V+ I + I W +G+ V F Y LF++F+ AY++K+ +
Sbjct: 214 QMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFGVYFTYFLLFANFFYHAYVKKNNRYTE 273
Query: 237 AKSMMKVEDEPVKYETKEMK 256
K K ++EPV +E E K
Sbjct: 274 VKKDKKEKEEPVDFEILEPK 293
>Z19154-4|CAA79555.1| 291|Caenorhabditis elegans Hypothetical
protein C40H1.4 protein.
Length = 291
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 117 LHVIHHG-IMPMSVWFGVKFTPGGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWK 175
LH HH ++ +V G + T G F+ ++N F H +MY+YY ++A+G ++ K W
Sbjct: 161 LHYYHHAAVLIYTVHSGAEHTAAGR--FYILMNYFAHSLMYTYYTVSAMGYRLPK--WVS 216
Query: 176 KYLTALQMVQF-----VLVFIHAFQLLF-IDCDYPRAFVWWIGMHAVLFYYLFSDFYKQA 229
+T +Q Q + ++ + + + C A ++ + V F LF F+ +A
Sbjct: 217 MTVTTVQTTQMLAGVGITWMVYKVKTEYKLPCQQSVANLYLAFVIYVTFAILFIQFFVKA 276
Query: 230 YLRKSKKAKSMMKVE 244
Y+ KS K +K E
Sbjct: 277 YIIKSSKKSKSVKNE 291
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 33 FPTLAICLTYVFIVKVLGPKLMENRKPFELKQVLIWYNLFQVIFS 77
+ ++ I + Y ++KV+ K MENRKPF LK LI +N FS
Sbjct: 53 YHSITISVLYFILIKVI-QKFMENRKPFTLKYPLILWNGALAAFS 96
>Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical
protein F11E6.5 protein.
Length = 274
Score = 49.6 bits (113), Expect = 2e-06
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 31 SPFPTLAICLTYVFIVKV-LGPKLMENRKPFELKQVL-IW------------YNLFQVIF 76
S F L+ + ++V + G KLM +RKPF+L+ L +W Y L +F
Sbjct: 30 STFVPLSYKIMIGYLVTIYFGQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYKLIPELF 89
Query: 77 SCWL--------------FYETVNGCW-WYYXXXXX-XXXXXXXXVMRKKFDHVSKLHVI 120
++ + + G W W + V+RKK V +H
Sbjct: 90 GVFMKDGFVASYCQNENYYTDASTGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWY 147
Query: 121 HHGIMPMSVWFGVKFTPGGHSTFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLT 179
HH + V+ V ++ + + LN VH VMY Y+ + AL Q + + K++T
Sbjct: 148 HHALT--FVYAVVTYSEHQAWARWSLALNLAVHTVMYFYFAVRALNIQTPRPV--AKFIT 203
Query: 180 ALQMVQFVLVFIHAFQLLFIDC--DYPRAFVWWI-----GMHAVLFYYLFSDFYKQAYLR 232
+Q+VQFV+ L+FI P V W G+ + + +LF+ F+ +AY++
Sbjct: 204 TIQIVQFVISCYIFGHLVFIKSADSVPGCAVSWNVLSIGGLMYISYLFLFAKFFYKAYIQ 263
Query: 233 KSKKAKS 239
K K+
Sbjct: 264 KRSPTKT 270
>Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical
protein F56H11.3 protein.
Length = 309
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 106 VMRKKFDHVSKLHVIHHGIMPMSVWFGVKF-TPGGHSTFFGMLNTFVHIVMYSYYLLAAL 164
V+RKK + LH HH M V+F + TP S ++N FVH MY YY ++
Sbjct: 167 VLRKK--PLIFLHWYHH--MATFVFFCSNYPTPSSQSRVGVIVNLFVHAFMYPYYFTRSM 222
Query: 165 GPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLLFID-------CDYPRAFVWWIGMHAVL 217
+V + +T LQ+ QF + FI+ L++ CD P + +
Sbjct: 223 NIKVPAKI--SMAVTVLQLTQF-MCFIYGCTLMYYSLATNQYTCDTPMFVLHSTFALSSS 279
Query: 218 FYYLFSDFYKQAYLRKSKK 236
++ LF++F+ +AYL++ K
Sbjct: 280 YFVLFANFFHKAYLQRGGK 298
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 38 ICLTYVFIVKVLGPKLMENRKPFELKQVLIWYNLFQVIFSCW 79
+ + YV +V + + M +R+PF+L L +N F +FS +
Sbjct: 72 MAIAYVILVFSI-KRFMRDREPFQLTTALRLWNFFLSVFSIY 112
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 47.2 bits (107), Expect = 1e-05
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 42/263 (15%)
Query: 14 LMDNKSDQRVKDWFLMSSPFPTLAICLTYVFIVKVLGPKLMENRKPFELKQVLIWYNLFQ 73
L+++ D F + F ++ + Y+ +L + ME+RKP ++ +L+ +N F
Sbjct: 31 LIESWWDDLTMHTFFKNHWFKSVYLSAAYIIATNLL-QRYMESRKPKSMRPLLLAWNGFL 89
Query: 74 VIFSC---WLF----YETV-----------------NGCWW---YYXXXXXXXXXXXXXV 106
+FS W F Y+ V +W + V
Sbjct: 90 AVFSIMGTWRFGIEFYDAVFRRGFIDSICLAVNPRSPSAFWACMFALSKIAEFGDTMFLV 149
Query: 107 MRKKFDHVSKLHVIHHGIMPMSVWFG-VKFTPGGHSTFFGMLNTFVHIVMYSYYLLAALG 165
+RK+ V LH HH ++ + W ++ T G +F +N VH +MY+YY + ++G
Sbjct: 150 LRKR--PVIFLHWYHHAVVLILSWHAAIELTAPGR--WFIFMNYLVHSIMYTYYAITSIG 205
Query: 166 PQVQKYLWWKKYLTALQMVQFVLVFIHAFQLLFIDCDYPRA------FVWWIGMHAVLFY 219
++ K + +T LQ +Q ++ + +L++ + G++A F
Sbjct: 206 YRLPKIV--SMTVTFLQTLQMLIGVSISCIVLYLKLNGEMCQQSYDNLALSFGIYA-SFL 262
Query: 220 YLFSDFYKQAYLRKSKKAKSMMK 242
LFS F+ AYL K K + K
Sbjct: 263 VLFSSFFNNAYLVKKDKKPDVKK 285
>U61954-8|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 41.9 bits (94), Expect = 5e-04
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 140 HSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQF-VLVF--IHAFQL 196
H + +N +H MY YYLL +L + + + +T QMVQF V +F +H
Sbjct: 168 HMVWVVWMNYIIHAFMYGYYLLKSLKVPIPPSV--AQAITTSQMVQFAVAIFAQVHVSYK 225
Query: 197 LFIDCDYPRAFVW---WIGMHAV-LFYYLFSDFYKQAYLRKSKKAKSMMKVEDEPVKYET 252
+++ A+ + IG + ++YL+ FYK+ YL+ K ++ K + K +T
Sbjct: 226 HYVEGVEGLAYSFRGTAIGFFMLTTYFYLWIQFYKEHYLKNGGKKYNLAK---DQAKTQT 282
Query: 253 KE 254
K+
Sbjct: 283 KK 284
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 30.7 bits (66), Expect = 1.2
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 124 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWW----KKY 177
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 178 LTALQMVQFVLVFIHAFQ--LLFIDCDYPRAFV-WWIGMHAVL-FYYLFS 223
+ AL++ + V A + +LF F WW A L F +LFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 30.7 bits (66), Expect = 1.2
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 124 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWW----KKY 177
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 178 LTALQMVQFVLVFIHAFQ--LLFIDCDYPRAFV-WWIGMHAVL-FYYLFS 223
+ AL++ + V A + +LF F WW A L F +LFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 30.7 bits (66), Expect = 1.2
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 124 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWW----KKY 177
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 178 LTALQMVQFVLVFIHAFQ--LLFIDCDYPRAFV-WWIGMHAVL-FYYLFS 223
+ AL++ + V A + +LF F WW A L F +LFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical protein
W08D2.5 protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 153 IVMYSYYLLAAL---GPQVQKYLWWKKYLTALQMVQFVL-VFIHAFQLLFI-----DCDY 203
+ M+ Y +LA + GP + LW K + AL + +L +FI + + + +
Sbjct: 1056 VSMFQYIILALVYSKGPPFRGNLWSNKPMCALTIFATLLCLFIVIWPTELVLKTLGNVEL 1115
Query: 204 P----RAFVWWIG-MHAVLFY---YLFSDFYKQAYLRKSKKAKSMMKVEDEPVKYETKEM 255
P R F+ +G ++A + Y LF DF+ Y + KK +S+ + D + +
Sbjct: 1116 PSLTFRIFIVIVGAVNAAVSYGFETLFVDFFLLGYWERYKKKRSIEAIIDYVPTTNSDHI 1175
Query: 256 KLPLLNGFSN 265
+ P +NG ++
Sbjct: 1176 RRPSINGVTS 1185
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 226 YKQAYLRKSKKAKS-MMKVEDEPVKYETKEMKLPLLNGFSNGSAL 269
+K +L++++KA+ +K++D+ + T K PLL F+N A+
Sbjct: 242 WKTEWLKQTEKAREKQVKLDDKRERARTGSEKAPLLGTFNNYGAV 286
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 223 SDFYKQAYLRKSKKAKSMMKVEDEPVKYETKEMKLPLLNG 262
S+F Q++LR+ + K+ ++ ++ KYE + + + +L G
Sbjct: 870 SEFSGQSWLRRKESRKNAKEMNEDQGKYEKEGLPIAVLTG 909
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 238 KSMMKVEDEPVKYETKEM-KLPLLNGFSNGSALGD 271
K + +++D P+++ ++ L +NG SNGSA GD
Sbjct: 503 KPLKRIQDTPLQFSLPDLANLIGVNGNSNGSAEGD 537
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 238 KSMMKVEDEPVKYETKEM-KLPLLNGFSNGSALGD 271
K + +++D P+++ ++ L +NG SNGSA GD
Sbjct: 492 KPLKRIQDTPLQFSLPDLANLIGVNGNSNGSAEGD 526
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 175 KKYLTALQMVQFVLVFIHAFQLLFIDCDYPRAFVWWIGM 213
+K L+ Q VQF+LVF+ AF L ++ Y WW G+
Sbjct: 93 EKELSYYQWVQFILVFL-AF-LFYLPYLYWSTVNWWSGL 129
>AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical
protein ZK185.4 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 144 FGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLLFIDCDY 203
+G ++ V IV+ Y L+A L+WK T + ++ ++ F ++F Y
Sbjct: 184 YGRISYHVKIVISICYFLSAPAIATFYALYWKACFTWAYELFALVEYLDVFMVIF----Y 239
Query: 204 PRAFVWWIGMHAVLF 218
V+W H V+F
Sbjct: 240 HGCCVYWDIQHKVVF 254
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.330 0.141 0.469
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,726,846
Number of Sequences: 27539
Number of extensions: 271154
Number of successful extensions: 949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 925
Number of HSP's gapped (non-prelim): 28
length of query: 283
length of database: 12,573,161
effective HSP length: 81
effective length of query: 202
effective length of database: 10,342,502
effective search space: 2089185404
effective search space used: 2089185404
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 59 (27.9 bits)
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