Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000290-TA|BGIBMGA000290-PA|IPR005532|Protein of unknown
function DUF323
         (235 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 41  EVSNQDFKHFTRVT--NYKTEADIFGDSFVFALFLNNTFKEK 80
           EVSN +FK ++ VT  +Y +  D+  D+F        +F +K
Sbjct: 100 EVSNNNFKTYSNVTTCSYYSLDDLSEDTFYDIRLWGVSFSKK 141


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 162 LFPERQYKANIWQGTFPHHNSAKDNFVGT--NPVELFPQNDFGLHNMAGNVWE 212
           LFP  +     WQ +  H  S  D FV     P +    + + LH  +GN++E
Sbjct: 173 LFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWSLHPDSGNMFE 225


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 32  VKSFFLDKYEVSNQDFKHFTRVTNYKTEADIFGDSFVFALFLN 74
           +KSFF   YE+S Q+  +     +++    IF    V  L  +
Sbjct: 89  IKSFFNQGYELSKQEIFNCCSKKSFRMNFAIFNLYMVLLLLFD 131


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 173 WQGTFPHHNSAKDNFVGTNPVELFPQNDFGLHNMAGNVWEWTE 215
           ++ T P +  A+ N+ G     +  Q   G  N+    W+ ++
Sbjct: 413 FKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQSD 455


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,726
Number of Sequences: 317
Number of extensions: 3004
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 235
length of database: 114,650
effective HSP length: 55
effective length of query: 180
effective length of database: 97,215
effective search space: 17498700
effective search space used: 17498700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)