GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000290-TA|BGIBMGA000290-PA|IPR005532|Protein of unknown
function DUF323
         (235 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023712-1|AAY85112.1|  337|Drosophila melanogaster GH26754p pro...   278   6e-75
AY069540-1|AAL39685.1|  303|Drosophila melanogaster LD26422p pro...   278   6e-75
AE014296-19|AAF47337.1|  336|Drosophila melanogaster CG7049-PA p...   278   6e-75
AE014134-3261|AAF53907.2| 1320|Drosophila melanogaster CG2478-PA...    31   1.4  
AY070647-1|AAL48118.1|  463|Drosophila melanogaster RH03206p pro...    29   5.5  
AF517546-1|AAM88328.1|  463|Drosophila melanogaster juvenile hor...    29   5.5  
AE013599-2789|AAF57621.1|  463|Drosophila melanogaster CG15102-P...    29   5.5  
AE013599-2788|AAO41355.2|  393|Drosophila melanogaster CG15102-P...    29   5.5  
AB107959-1|BAD04047.1|  463|Drosophila melanogaster microsomal e...    29   5.5  
BT023878-1|ABA81812.1| 1320|Drosophila melanogaster RE66325p pro...    29   7.3  
X68131-1|CAA48238.1|  690|Drosophila melanogaster peroxidase pro...    28   9.7  
AY541497-1|AAS48542.1|  690|Drosophila melanogaster chorion pero...    28   9.7  
AE014297-2290|AAS65161.1|  690|Drosophila melanogaster CG3477-PA...    28   9.7  

>BT023712-1|AAY85112.1|  337|Drosophila melanogaster GH26754p
           protein.
          Length = 337

 Score =  278 bits (681), Expect = 6e-75
 Identities = 124/234 (52%), Positives = 153/234 (65%), Gaps = 3/234 (1%)

Query: 2   MVLVPGGEYQYGTDDIVIENDNEGPKRIVKVKSFFLDKYEVSNQDFKHFTRVTNYKTEAD 61
           M L+PGG    GTD      D E P+R VK+  F++DKYEVSN+ F  F   TNY TEA+
Sbjct: 68  MSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAE 127

Query: 62  IFGDSFVFALFLNNTFKEKIKDFRVAQATWWYKVFGANWNHPFGPDSSITDVMDHPVIHA 121
            +GDSF+F   L+   ++ ++DFRVA A WWYKV G NW HP G DS I  +  HPV+H 
Sbjct: 128 RYGDSFLFKSLLSPLEQKNLEDFRVASAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHV 187

Query: 122 SWNDAKAYCKWRRARLPTEIEWEAACRGGHQDIKYPWGNKLFPERQYKANIWQGTFPHHN 181
           SW DA  YCKW   RLP+E EWEAACRGG +   +PWGNKL P  ++  NIWQG FP  N
Sbjct: 188 SWRDAVEYCKWAGKRLPSEAEWEAACRGGKERKLFPWGNKLMPRNEHWLNIWQGDFPDGN 247

Query: 182 SAKDNFVGTNPVELFPQNDFGLHNMAGNVWEWTEDAWTEDDPKE---KVKKGGT 232
            A+D F  T+PV+ F QN + LHNM GNVWEWT D W  +D  +   +VKKGG+
Sbjct: 248 LAEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWDVNDVSDNPNRVKKGGS 301


>AY069540-1|AAL39685.1|  303|Drosophila melanogaster LD26422p
           protein.
          Length = 303

 Score =  278 bits (681), Expect = 6e-75
 Identities = 124/234 (52%), Positives = 153/234 (65%), Gaps = 3/234 (1%)

Query: 2   MVLVPGGEYQYGTDDIVIENDNEGPKRIVKVKSFFLDKYEVSNQDFKHFTRVTNYKTEAD 61
           M L+PGG    GTD      D E P+R VK+  F++DKYEVSN+ F  F   TNY TEA+
Sbjct: 34  MSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAE 93

Query: 62  IFGDSFVFALFLNNTFKEKIKDFRVAQATWWYKVFGANWNHPFGPDSSITDVMDHPVIHA 121
            +GDSF+F   L+   ++ ++DFRVA A WWYKV G NW HP G DS I  +  HPV+H 
Sbjct: 94  RYGDSFLFKSLLSPLEQKNLEDFRVASAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHV 153

Query: 122 SWNDAKAYCKWRRARLPTEIEWEAACRGGHQDIKYPWGNKLFPERQYKANIWQGTFPHHN 181
           SW DA  YCKW   RLP+E EWEAACRGG +   +PWGNKL P  ++  NIWQG FP  N
Sbjct: 154 SWRDAVEYCKWAGKRLPSEAEWEAACRGGKERKLFPWGNKLMPRNEHWLNIWQGDFPDGN 213

Query: 182 SAKDNFVGTNPVELFPQNDFGLHNMAGNVWEWTEDAWTEDDPKE---KVKKGGT 232
            A+D F  T+PV+ F QN + LHNM GNVWEWT D W  +D  +   +VKKGG+
Sbjct: 214 LAEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWDVNDVSDNPNRVKKGGS 267


>AE014296-19|AAF47337.1|  336|Drosophila melanogaster CG7049-PA
           protein.
          Length = 336

 Score =  278 bits (681), Expect = 6e-75
 Identities = 124/234 (52%), Positives = 153/234 (65%), Gaps = 3/234 (1%)

Query: 2   MVLVPGGEYQYGTDDIVIENDNEGPKRIVKVKSFFLDKYEVSNQDFKHFTRVTNYKTEAD 61
           M L+PGG    GTD      D E P+R VK+  F++DKYEVSN+ F  F   TNY TEA+
Sbjct: 67  MSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAE 126

Query: 62  IFGDSFVFALFLNNTFKEKIKDFRVAQATWWYKVFGANWNHPFGPDSSITDVMDHPVIHA 121
            +GDSF+F   L+   ++ ++DFRVA A WWYKV G NW HP G DS I  +  HPV+H 
Sbjct: 127 RYGDSFLFKSLLSPLEQKNLEDFRVASAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHV 186

Query: 122 SWNDAKAYCKWRRARLPTEIEWEAACRGGHQDIKYPWGNKLFPERQYKANIWQGTFPHHN 181
           SW DA  YCKW   RLP+E EWEAACRGG +   +PWGNKL P  ++  NIWQG FP  N
Sbjct: 187 SWRDAVEYCKWAGKRLPSEAEWEAACRGGKERKLFPWGNKLMPRNEHWLNIWQGDFPDGN 246

Query: 182 SAKDNFVGTNPVELFPQNDFGLHNMAGNVWEWTEDAWTEDDPKE---KVKKGGT 232
            A+D F  T+PV+ F QN + LHNM GNVWEWT D W  +D  +   +VKKGG+
Sbjct: 247 LAEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWDVNDVSDNPNRVKKGGS 300


>AE014134-3261|AAF53907.2| 1320|Drosophila melanogaster CG2478-PA
           protein.
          Length = 1320

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 113 VMDHPVIHASWNDAKAYCKW----RRARLPTEIEWEAACRGGHQDIKYPWGNKLFPER 166
           V DHPV H  W D + + +        +  ++IE    CR  H+ +K  +G+ L+  R
Sbjct: 80  VHDHPVEHNDWGDFQTHRRLLGLVTIGKFDSQIELNELCR-QHESLKVRYGSTLYESR 136


>AY070647-1|AAL48118.1|  463|Drosophila melanogaster RH03206p
           protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 186 NFVGTNPVELFPQNDFGLH-NMAGN 209
           + +G+N   LFP+N  G H NM GN
Sbjct: 239 SIIGSNVASLFPENVLGYHSNMCGN 263


>AF517546-1|AAM88328.1|  463|Drosophila melanogaster juvenile
           hormone epoxide hydrolaseII protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 186 NFVGTNPVELFPQNDFGLH-NMAGN 209
           + +G+N   LFP+N  G H NM GN
Sbjct: 239 SIIGSNVASLFPENVLGYHSNMCGN 263


>AE013599-2789|AAF57621.1|  463|Drosophila melanogaster CG15102-PA,
           isoform A protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 186 NFVGTNPVELFPQNDFGLH-NMAGN 209
           + +G+N   LFP+N  G H NM GN
Sbjct: 239 SIIGSNVASLFPENVLGYHSNMCGN 263


>AE013599-2788|AAO41355.2|  393|Drosophila melanogaster CG15102-PB,
           isoform B protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 186 NFVGTNPVELFPQNDFGLH-NMAGN 209
           + +G+N   LFP+N  G H NM GN
Sbjct: 169 SIIGSNVASLFPENVLGYHSNMCGN 193


>AB107959-1|BAD04047.1|  463|Drosophila melanogaster microsomal
           epoxide hydrolase protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 186 NFVGTNPVELFPQNDFGLH-NMAGN 209
           + +G+N   LFP+N  G H NM GN
Sbjct: 239 SIIGSNVASLFPENVLGYHSNMCGN 263


>BT023878-1|ABA81812.1| 1320|Drosophila melanogaster RE66325p
           protein.
          Length = 1320

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 113 VMDHPVIHASWNDAKAYCKW----RRARLPTEIEWEAACRGGHQDIKYPWGNKLFPER 166
           V D+PV H  W D + + +        +  ++IE    CR  H+ +K  +G+ L+  R
Sbjct: 80  VHDYPVEHNDWGDFQTHRRLLGLVTIGKFDSQIELNELCR-QHESLKVRYGSTLYESR 136


>X68131-1|CAA48238.1|  690|Drosophila melanogaster peroxidase
           protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 101 NHPFGPDSSITDVM---DHPVIHASWNDAKAYCKWRRA 135
           N PFG D    D+    DH +  AS+ND + +C  RRA
Sbjct: 506 NMPFGSDLRSLDIQRNRDHGL--ASYNDMREFCGLRRA 541


>AY541497-1|AAS48542.1|  690|Drosophila melanogaster chorion
           peroxidase protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 101 NHPFGPDSSITDVM---DHPVIHASWNDAKAYCKWRRA 135
           N PFG D    D+    DH +  AS+ND + +C  RRA
Sbjct: 506 NMPFGSDLRSLDIQRNRDHGL--ASYNDMREFCGLRRA 541


>AE014297-2290|AAS65161.1|  690|Drosophila melanogaster CG3477-PA
           protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 101 NHPFGPDSSITDVM---DHPVIHASWNDAKAYCKWRRA 135
           N PFG D    D+    DH +  AS+ND + +C  RRA
Sbjct: 506 NMPFGSDLRSLDIQRNRDHGL--ASYNDMREFCGLRRA 541


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.136    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,601,756
Number of Sequences: 52641
Number of extensions: 588403
Number of successful extensions: 886
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 883
Number of HSP's gapped (non-prelim): 13
length of query: 235
length of database: 24,830,863
effective HSP length: 83
effective length of query: 152
effective length of database: 20,461,660
effective search space: 3110172320
effective search space used: 3110172320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)