Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000290-TA|BGIBMGA000290-PA|IPR005532|Protein of unknown
function DUF323
(235 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical ... 31 0.54
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 30 1.7
U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein. 30 1.7
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical
protein C24D10.1 protein.
Length = 482
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 163 FPERQYKANIWQGTFPHHNSAKDNFVGTNPVELFPQNDFGLHNMAGNVW 211
FP + + W+ F ++ D VG P+E FP+ N G +W
Sbjct: 251 FPVKDTEETFWKAVFDKRITSIDVLVGDEPIEFFPKKAEDYKNY-GQMW 298
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 156 YPWGNKLFPERQYKANIWQGTFPHHNSAKDNF--VGTNPVELFPQNDFGLHNMAGNVWE 212
Y W LFP Q WQ + H S D F V +P + + + LH GN++E
Sbjct: 168 YNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFE 226
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 156 YPWGNKLFPERQYKANIWQGTFPHHNSAKDNF--VGTNPVELFPQNDFGLHNMAGNVWE 212
Y W LFP Q WQ + H S D F V +P + + + LH GN++E
Sbjct: 199 YNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFE 257
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 156 YPWGNKLFPERQYKANIWQGTFPHHNSAKDNF--VGTNPVELFPQNDFGLHNMAGNVWE 212
Y W LFP Q WQ + H S D F V +P + + + LH GN++E
Sbjct: 263 YNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFE 321
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein.
Length = 506
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 156 YPWGNKLFPERQYKANIWQGTFPHHNSAKDNF--VGTNPVELFPQNDFGLHNMAGNVWE 212
Y W LFP Q WQ + H S D F V +P + + + LH GN++E
Sbjct: 263 YNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFE 321
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 168 YKANIWQGTFPHHNSAKDNFVGTNPVELFPQNDFGLHNM 206
Y N+W+GTF + S + N + Q FG +N+
Sbjct: 641 YIRNLWKGTFQYQESLHTLDISFNDILFLHQGTFGKNNI 679
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 154 IKYPWGNKLF----PERQYKANIWQGTFPHHNSAKDNFVGTNPVELFPQNDFGLHNMAGN 209
++ P G ++ P + + W+ F + D VG P+E FP+ N G
Sbjct: 238 VEIPLGRNIYIGQVPVKDTEETFWKAVFDKRIVSIDVIVGDEPIEFFPKKAEDYKNY-GQ 296
Query: 210 VW 211
+W
Sbjct: 297 MW 298
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 119 IHASWNDAKAYCKWRRARLPTEIEWEAACRGGHQDIKYPW---GNKLFPERQY 168
I+ WN Y + + T + E A G H DI PW G+ L E++Y
Sbjct: 282 IYIPWNSTDRYMQASKPLPFTPVHLEIAYNGKHDDI--PWVACGSSLVEEQEY 332
>Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical
protein T02D1.3 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 63 FGDSFVFALFLNNTFKEKIKDFRVAQATWW 92
FG +VF F+NN F K+ +F V A +W
Sbjct: 187 FGHIYVF--FINNWFNVKLDNFLVPNAIFW 214
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 11/55 (20%)
Query: 140 EIEWEAACRGGHQDIKYPWGNKLFPERQYKAN-IWQGTFPHHNSAKDNFVGTNPV 193
+++W+ + GG +DI+ P GN AN IW+ +NSA +NF T PV
Sbjct: 88 KLKWDPSEYGGIKDIRIP-GN---------ANAIWKPDVLLYNSADENFDSTYPV 132
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,050,515
Number of Sequences: 27539
Number of extensions: 316550
Number of successful extensions: 518
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 516
Number of HSP's gapped (non-prelim): 10
length of query: 235
length of database: 12,573,161
effective HSP length: 79
effective length of query: 156
effective length of database: 10,397,580
effective search space: 1622022480
effective search space used: 1622022480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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