GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000288-TA|BGIBMGA000288-PA|IPR002816|TraB determinant
         (339 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     29   0.14 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.0  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    24   5.3  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    24   5.3  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 9   QNDEHKPRDNSDGIIFAPPKPSVKRDITNECQLFIKAEDGGGDASIKINENMPGE--NSG 66
           Q+D H  R +S  +     K S   DI +EC+ F+  +  GG     +NEN+     +  
Sbjct: 23  QHDPHFVRGHSTIVHLFEWKWS---DIADECERFLGPKGYGGVQLSPVNENIVIRLADGS 79

Query: 67  KPKFVTSTPDEKK---ESPSENQIADSNPECDMEGV 99
           +P +    P   K    S SE + AD +  C+  GV
Sbjct: 80  RPWWERYQPISFKLDTRSGSEAEFADMSRRCNAAGV 115


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 23  IFAPPKPSVKRDITNECQLFIKAEDGGGDA---SIKINENMPGENSGKPKFVTSTPDEK- 78
           + A   P   R+I  +  L ++A D GG     ++ +  N+   N   P FV    + + 
Sbjct: 575 LMASESPVFDREIIQKHYLSVEARDNGGRGNRNTVPLILNVLDVNDNAPVFVQKRYEVRL 634

Query: 79  KES--PSENQIADSNPECDMEGVP 100
           KE+    E+ I     + D+EG P
Sbjct: 635 KENAFEFESPIVVEARDSDLEGSP 658


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 46   EDGGGDASIKINENMPGENSG 66
            +DG   AS+  N+N P EN+G
Sbjct: 1093 DDGKEPASVISNDNGPSENNG 1113


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1
          protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 25 APPKPSVKRDITNECQLFIKAEDGGGDASIKINENMPG 62
          APP+  ++  +T+ C   I     G DAS++ + ++ G
Sbjct: 27 APPQQQLEDPVTDVCLSCICEASSGCDASLRCSGDVCG 64


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 242 IWHLLTSNQTISLEEVEKCK 261
           IW + T + ++SLE+VE+ K
Sbjct: 226 IWTVFTESISVSLEQVERFK 245


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,817
Number of Sequences: 2123
Number of extensions: 12661
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 5
length of query: 339
length of database: 516,269
effective HSP length: 64
effective length of query: 275
effective length of database: 380,397
effective search space: 104609175
effective search space used: 104609175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)