Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000287-TA|BGIBMGA000287-PA|IPR009180|Peptidase M22,
O-sialoglycoprotein endopeptidase, IPR000905|Peptidase M22,
glycoprotease
(334 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 109 5e-25
SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces po... 68 2e-12
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 33 0.075
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 29 0.93
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 27 5.0
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 5.0
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 5.0
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 26 6.5
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.7
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 26 8.7
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 26 8.7
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 109 bits (262), Expect = 5e-25
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 12/199 (6%)
Query: 11 LRILRQNR-W---KTTSCSNDFTILGIETSCDDTGCAVI---DGAGNVLGE--SLYSQNA 61
L++L+Q R W KT T L IETSCDDT +V+ D + + E L +
Sbjct: 18 LKVLQQFRCWNISKTFLSYRTLTALAIETSCDDTSVSVVRTSDSSSHCQNEIICLNTHRT 77
Query: 62 I--HVRYGGVNPFIAHELHREHIETAVTEALS-TAKIKIKDIDAVAVTVKPGLLLSLQVG 118
I + YGG++P I H++++ + +S A+ I D D +AVT PG++ L VG
Sbjct: 78 ISKYEAYGGIHPTIVIHEHQKNLAKVIQRTISDAARSGITDFDLIAVTRGPGMIGPLAVG 137
Query: 119 VQYAKYICMEYNKTIIPVHHMEAHALVARIYHNLPFPFIVLLISGGHCLLCLVQDVNQFL 178
+ AK + + K ++ VHHM+AHAL ++ ++ FP++ +L+SGGH +L +
Sbjct: 138 LNTAKGLAVGLQKPLLAVHHMQAHALAVQLEKSIDFPYLNILVSGGHTMLVYSNSLLNHE 197
Query: 179 LLGESLDNAPGEILDKVAR 197
++ + D A G+ LDK A+
Sbjct: 198 IIVTTSDIAVGDYLDKCAK 216
>SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 68.1 bits (159), Expect = 2e-12
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 31 LGIETSCDDTGCAVIDGAGNVLGESLYSQNAIHVRYGGVN--PFIAHELHREHIETAVTE 88
LG+E S + G +I N + L + ++ G P + HR I + +
Sbjct: 8 LGLEGSANKLGVGIILHDTNGSAKILANVRHTYITPPGQGFLPSDTAKHHRAWIIPLIKQ 67
Query: 89 ALSTAKIKIKDIDAVAVTVKPGLLLSLQVGVQYAKYICMEYNKTIIPVHHMEAHALVARI 148
A + AKI KDID + T PG+ L A+ + + + K ++ V+H H + R
Sbjct: 68 AFAEAKISFKDIDCICFTKGPGIGAPLNSVALCARMLSLIHKKPLVAVNHCIGHIEMGRE 127
Query: 149 YHNLPFPFIVLLISGGHCLLCLVQDVNQFLLLGESLDNAPGEILDKVARRMKLKNIKDAG 208
P +VL +SGG+ + + ++ + GE+LD A G LD+ AR + L N G
Sbjct: 128 ITGAQNP-VVLYVSGGNTQV-IAYSEKKYRIFGETLDIAIGNCLDRFARIIGLSNAPSPG 185
Query: 209 LTV 211
+
Sbjct: 186 YNI 188
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 221 YEDRRSSASACVPSVDRRAMETNERVLCCTDEWTDR-TDVC 260
Y + A+ V +D ETNE +L T EW DR T+VC
Sbjct: 182 YNLKIRQAALAVKKMDAEYRETNELLLTVTREWIDRWTEVC 222
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 205 KDAGLTVRTRILLRTAYEDRRSSASACVPSVDRRAMETNERVLCCTDEWTDRTD 258
K+ G+ LL + Y R +ASA V S + R + ER C WT R D
Sbjct: 19 KENGVEFSDLFLLSSGYLRDRENASASVSSKNERMVLNEERQNC----WTKRND 68
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 262 IIKKSDFVLNVAKYIDTERLITEVRLREPLWDKGHVLYKDHDAKLKAWQEVYADNSSKLD 321
I+K ++ V+ V + + R+I E ++ LW + V H+ K K + V N
Sbjct: 194 IVKGTEKVILVQEQLSKNRIIVEAEPKKGLW-QASVTSSTHERKSKTY--VITKNGKLYL 250
Query: 322 RHSEI 326
+H+ +
Sbjct: 251 KHNSV 255
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 263 IKKSDFVLNVAKYIDTERLITEVRLREPLWDKGHVLYKDHDAKLKAWQE 311
+KK D +L +D+ E R+ E W + H+ +L AW E
Sbjct: 248 LKKIDLLLEEILQLDSAYDAAERRMIESGWSSVDEIRDVHNKRLDAWSE 296
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 159 LLISGGHCLLCLVQDVNQFLLLGESLDNAPGEILDKVARRMKLKNIKDAGLTVRTRILLR 218
LL + HCL +D+ + + L E + L K A L+N+ DA LT ++
Sbjct: 567 LLHNQVHCLT--EEDLEELVNLTEGYSGSDITALAKDAAMGPLRNLGDALLTTSAEMIPP 624
Query: 219 TAYEDRRSSASACVPSVDRRAMETNE 244
+ ++S PSV + + E
Sbjct: 625 ISLNHFKASLRTIRPSVSQEGIHRYE 650
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 271 NVAKYIDTERLITEVRLREPLWDKGHVLYKDHDAKLKAWQEVYADNSSKLDRHSEIIKKN 330
N A+Y +T L+ + + H+ D+ KA+++ AD S DR E+ +
Sbjct: 814 NFAEY-ETGELVYVIE-NTSFVEASHISVLFEDSSSKAFEQAIADKSITADRLYELQFEE 871
Query: 331 LNVP 334
N+P
Sbjct: 872 FNLP 875
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 113 LSLQVGVQYAKYICMEYNKTIIPVHHMEAHALVA 146
++L GV+ YIC++ I V+HM+ L A
Sbjct: 31 VALDNGVESPYYICVQVENQGIEVYHMKDERLFA 64
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 43 AVIDGAGNVLGESLYSQNAIHVRYGGVNP-FIAHELH 78
A +DG V + +NA YGG +P +I E H
Sbjct: 41 AEVDGKSMVEKVKTHEENAEDYHYGGYHPVYIGEEFH 77
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 239 AMETNERVLCCTDEWTDRTDVCIIIKKSDFVLNVAKYIDTERLITE 284
A +TNE +L C +TDV ++ + ++ Y+++ L+ E
Sbjct: 289 AYKTNENMLICAPTGAGKTDVALLA----MLQTISNYVESMNLMDE 330
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,510,458
Number of Sequences: 5004
Number of extensions: 62000
Number of successful extensions: 138
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 127
Number of HSP's gapped (non-prelim): 12
length of query: 334
length of database: 2,362,478
effective HSP length: 73
effective length of query: 261
effective length of database: 1,997,186
effective search space: 521265546
effective search space used: 521265546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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