Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000287-TA|BGIBMGA000287-PA|IPR009180|Peptidase M22,
O-sialoglycoprotein endopeptidase, IPR000905|Peptidase M22,
glycoprotease
(334 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0360 - 17966857-17966865,17966866-17966954,17967276-179673... 124 1e-28
01_02_0069 - 10813467-10813475,10813476-10813564,10813865-108139... 78 9e-15
05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382 72 6e-13
03_05_0227 + 22133847-22133951,22134648-22135047,22135452-221355... 33 0.43
11_01_0421 + 3236798-3237144,3237356-3237441,3237741-3237895,323... 31 1.7
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 30 2.3
04_04_0773 - 27974909-27977191 29 4.0
09_02_0516 - 10136400-10136516,10136606-10136894,10137578-101381... 28 9.2
>12_02_0360 -
17966857-17966865,17966866-17966954,17967276-17967399,
17967639-17967717,17968267-17968352,17968471-17968661,
17970496-17970560,17971192-17971282,17971705-17971801,
17971883-17972128,17972248-17972505
Length = 444
Score = 124 bits (299), Expect = 1e-28
Identities = 70/151 (46%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 64 VRYGGVNPFIAHELHREHIETAVTEALSTAKIKIKDIDAVAVTVKPGLLLSLQVGVQYAK 123
VR+GGV P +A E H I+ V +AL A + D+ AVAVTV PGL L L+VGV A+
Sbjct: 148 VRWGGVAPKMAEEAHSLAIDQVVQKALDDANVSENDLSAVAVTVGPGLSLCLRVGVHKAR 207
Query: 124 YICMEYNKTIIPVHHMEAHALVAR------IYHNLPFPFIVLLISGGHCLLCLVQDVNQF 177
I + I+ VHHMEAHALV+ + +L FPF+ LLISGGH LL L + Q+
Sbjct: 208 KIAKSFRLPIVGVHHMEAHALVSSSIDVRLVNKDLDFPFLALLISGGHNLLVLAHGLGQY 267
Query: 178 LLLGESLDNAPGEILDKVARRMKLKNIKDAG 208
+ LG ++D+A GE DK AR + L K G
Sbjct: 268 VQLGTTIDDAIGEAYDKSARWLGLDMRKGGG 298
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 21 TTSCSNDFTILGIETSCDDTGCAVIDGAGNVLGESLYSQ 59
+ + + D +LGIETSCDDT AV+ G G +L + + SQ
Sbjct: 63 SAAAAADLLMLGIETSCDDTAAAVVRGDGEILSQVVSSQ 101
>01_02_0069 -
10813467-10813475,10813476-10813564,10813865-10813988,
10814227-10814305,10815298-10815388,10815808-10815904,
10816197-10816241,10816369-10816464
Length = 209
Score = 78.2 bits (184), Expect = 9e-15
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 25/134 (18%)
Query: 20 KTTSCSNDFTILGIETSCDDTGCAVIDGAGNVLGESLYSQNAIHVRYGGVNPFIAHELHR 79
+ T + +LGIETSCDDT AV+ G G +L + + SQ
Sbjct: 8 RATPDHGNLLMLGIETSCDDTAAAVVRGDGEILSQVVSSQ-------------------- 47
Query: 80 EHIETAVTEALSTAKIKIKDIDAVAVTVKPGLLLSLQVGVQYAKYICMEYNKTIIPVHHM 139
V +AL A + D+ AVAVTV PGL L L+VGV A+ I ++ I+ VHHM
Sbjct: 48 -----VVQKALDNANVSESDLSAVAVTVGPGLSLCLRVGVHKARKIAKSFHLPIVGVHHM 102
Query: 140 EAHALVARIYHNLP 153
EA ALV+R ++P
Sbjct: 103 EAQALVSRSTDDIP 116
>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
Length = 441
Score = 72.1 bits (169), Expect = 6e-13
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 31 LGIETSCDDTGCAVIDGAGNVLGESLYSQNAIHVRYGGVNPFIAHELHREHIETAVTEAL 90
LG+E+S + G V+ +G +L ++ +G + AH H H+ + AL
Sbjct: 78 LGLESSANKIGIGVVSLSGEILSNPRHTY-VTPPGHGFLPRETAHH-HLAHLLPLLRAAL 135
Query: 91 STAKIKIKDIDAVAVTVKPGLLLSLQVGVQYAKYICMEYNKTIIPVHHMEAHALVARIYH 150
A + D+ V T PG+ LQV A+ + + + K ++ V+H AH + R
Sbjct: 136 GEAGVTPADLACVCYTKGPGMGAPLQVAAAAARALSLLWGKPLVGVNHCVAHVEMGRAVT 195
Query: 151 NLPFPFIVLLISGGHCLLCLVQDVNQFLLLGESLDNAPGEILDKVARRMKLKNIKDAGLT 210
P +VL +SGG+ + + ++ + GE++D A G LD+ AR ++L N G
Sbjct: 196 GAVDP-VVLYVSGGNTQV-IAYSEGRYRIFGETIDIAVGNCLDRFARVLELSNDPSPGYN 253
Query: 211 V 211
+
Sbjct: 254 I 254
>03_05_0227 +
22133847-22133951,22134648-22135047,22135452-22135561,
22135869-22135955
Length = 233
Score = 32.7 bits (71), Expect = 0.43
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 247 LCCTDEWTDRTDVCIIIKKSDFVLNVAKYIDTERLITEVRLRE 289
LCC EW +R+ C + K V V +I +T+ RL +
Sbjct: 187 LCCIYEWMERSQACPVCSKKKLVACVNPHITFRLDVTDARLSD 229
>11_01_0421 +
3236798-3237144,3237356-3237441,3237741-3237895,
3237971-3238035,3238180-3238363,3238785-3239048,
3239141-3239224,3239727-3239984,3240214-3240472,
3240550-3240755,3240896-3240946,3241041-3241337
Length = 751
Score = 30.7 bits (66), Expect = 1.7
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 76 ELHREHIETAVTEALSTAKIKIKDIDAVAVTVKPGLL--LSLQVGVQYAKYICMEYNKTI 133
ELHR I + S K + + +T K +L + LQ+ ++ + + + N +
Sbjct: 405 ELHRRSIAQMKVGSQSMLKT-----ETICITPKKRILTQIILQINARFIQDMQIYANPSE 459
Query: 134 IPVHHMEAHALVA-------RIYHNLPFPFI----VLLISGGHCLLCLVQD---VNQFLL 179
IPV H+E H +V R+ H+L I +L G CLL + F
Sbjct: 460 IPVVHIEQHVMVVPQHGSSKRLGHHLDLRLIRNQWILCDPGAECLLSQTNEDRTCGDFKE 519
Query: 180 LGESLDNAPGEILD-KVARRMKLKNIKDAGLT 210
+G L N L K+ R + KD L+
Sbjct: 520 MGRRLSNEVVAFLKRKIDRYSRNGGCKDLKLS 551
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 51 VLGESLYSQNAIHVRYGGVNPFIAHELHREHIETAVTEALSTAKIKIKDIDAVAVTVK-- 108
+L S+Y +N + G P + H L R +E A + + + D + + +
Sbjct: 459 LLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKITIGASGA 518
Query: 109 -PGLLLSLQVGVQYAK 123
P L+L L G Q K
Sbjct: 519 IPALVLLLSNGSQRGK 534
>04_04_0773 - 27974909-27977191
Length = 760
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 258 DVCIIIKKSDFVLNVAKYIDTERLITEVRLREPLWDKGHVLYKDHDAKLKAWQEVYADNS 317
+V +I + ++L VA + T VRL L+ G LY+ +D+ + VYA S
Sbjct: 319 NVSSVINDAPWMLTVAASTMDRSIRTTVRLGNGLYFDGESLYQPNDSPSTFYPLVYAGAS 378
Query: 318 SK 319
K
Sbjct: 379 GK 380
>09_02_0516 -
10136400-10136516,10136606-10136894,10137578-10138110,
10138719-10138892,10138898-10138903
Length = 372
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 202 KNIKDAGLTVRTRILLRTAYEDRRSSASACVPSVDRRAMETNERVLCCTDEWTDRTD 258
K++ + +T R I R SS+ + P+ DR A + ++ TD W DRT+
Sbjct: 142 KDLIEIRVTARPTIEPGGRPPKRPSSSPSAPPAQDRHAQSYDVQLKYDTDFWEDRTE 198
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,589,593
Number of Sequences: 37544
Number of extensions: 392257
Number of successful extensions: 838
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 829
Number of HSP's gapped (non-prelim): 10
length of query: 334
length of database: 14,793,348
effective HSP length: 82
effective length of query: 252
effective length of database: 11,714,740
effective search space: 2952114480
effective search space used: 2952114480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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