GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000287-TA|BGIBMGA000287-PA|IPR009180|Peptidase M22,
O-sialoglycoprotein endopeptidase, IPR000905|Peptidase M22,
glycoprotease
         (334 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical pr...   157   1e-38
AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical...    82   6e-16
Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z34801-3|CAA84327.1|  520|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical
           protein C01G10.10 protein.
          Length = 421

 Score =  157 bits (381), Expect = 1e-38
 Identities = 78/191 (40%), Positives = 119/191 (62%), Gaps = 3/191 (1%)

Query: 12  RILRQNR-WKTTSCSN-DFTILGIETSCDDTGCAVIDGAGNVLGESLYSQNAIHVRYGGV 69
           +IL  N   K   C N    +LGIETSCDDT  A+++    +L    Y++ AI  + GG+
Sbjct: 5   KILNNNLVLKRIFCRNYSVKVLGIETSCDDTAVAIVNEKREILSSERYTERAIQRQQGGI 64

Query: 70  NPFIAHELHREHIETAVTEALSTAKIKIKDIDAVAVTVKPGLLLSLQVGVQYAKYICMEY 129
           NP +    HRE++   + + L+ A    KD+DAVAVTV PGL+++L+ G+  A     ++
Sbjct: 65  NPSVCALQHRENLPRLIEKCLNDAGTSPKDLDAVAVTVTPGLVIALKEGISAAIGFAKKH 124

Query: 130 NKTIIPVHHMEAHAL-VARIYHNLPFPFIVLLISGGHCLLCLVQDVNQFLLLGESLDNAP 188
              +IPVHHM AHAL +  +  ++ FPF  +L+SGGH L+ + +DV +F L G+S+  +P
Sbjct: 125 RLPLIPVHHMRAHALSILLVDDSVRFPFSAVLLSGGHALISVAEDVEKFKLYGQSVSGSP 184

Query: 189 GEILDKVARRM 199
           GE +DKVAR++
Sbjct: 185 GECIDKVARQL 195


>AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.1 protein.
          Length = 337

 Score = 81.8 bits (193), Expect = 6e-16
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 30  ILGIETSCDDTGCAVIDGAGNVLGESLYSQNAIHVRYG-GVNPFIAHELHREHIETAVTE 88
           ++GIE S +  G  +I   G VL      +   H   G G  P    + HR+ I   V E
Sbjct: 4   VIGIEGSANKIGVGIIRD-GVVLSNP---RATFHAPPGEGFRPTETAQHHRQQIVRLVGE 59

Query: 89  ALSTAKIKIKD--IDAVAVTVKPGLLLSLQVGVQYAKYICMEYNKTIIPVHHMEAHALVA 146
           A+  A I+  +  ID +A T  PG+   LQVG   A+ + + + K IIPV+H   H  + 
Sbjct: 60  AIKLANIQNPELEIDGIAYTKGPGMGAPLQVGAIVARTLSLTWKKPIIPVNHCVGHIEMG 119

Query: 147 RIYHNLPFPFIVLLISGGHCLLCLVQDVNQFLLLGESLDNAPGEILDKVARRMKLKNIKD 206
           R+      P +VL +SGG+  + +     ++ + GE++D A G  LD+ AR +KL N   
Sbjct: 120 RLITGADNP-VVLYVSGGNTQV-ISYTKKRYRIFGETIDIAVGNCLDRFARVLKLPNAPS 177

Query: 207 AGLTV 211
            G  +
Sbjct: 178 PGYNI 182


>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 42  CAVIDGAGNVLGESLYSQNAIHVRYGGVNPFIAHELHREHIETAVTEALSTAKIKIKD 99
           C++ DG   +L    Y +  +++R+ G+N      LH+E +E  VTE     + K  D
Sbjct: 803 CSLRDG-DIILHNLDYPEVILNLRFNGINQDSDPRLHQEIVERHVTELQKYLEFKDAD 859


>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
           protein Y49E10.11b protein.
          Length = 1089

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 272 VAKYIDTERLITE-VRLREPLWDKGHVLYKDHDAKL 306
           VA++   ++L+    RL+   W  G V+Y  HD+KL
Sbjct: 219 VARHFGIDQLLLRGARLKNTAWIFGAVIYTGHDSKL 254


>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
           protein Y49E10.11a protein.
          Length = 1139

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 272 VAKYIDTERLITE-VRLREPLWDKGHVLYKDHDAKL 306
           VA++   ++L+    RL+   W  G V+Y  HD+KL
Sbjct: 219 VARHFGIDQLLLRGARLKNTAWIFGAVIYTGHDSKL 254


>Z34801-3|CAA84327.1|  520|Caenorhabditis elegans Hypothetical
           protein F59A2.2 protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 179 LLGESLDNAPGEILDKVARRMKLKNIKDAGLTVRTRILLRTAYEDRRSSASACV----PS 234
           +L E L N+ G    K     K ++ K   +  + +I +++  +D++            S
Sbjct: 214 ILAEKLSNSAGNGDGKEELEKKCEDYKR--MLEQCKIKIKSLQQDKKEQQQLITVDNDDS 271

Query: 235 VDRRAMETNERVLCCTDEWTDR 256
           VD R  E  +R+    +EWT+R
Sbjct: 272 VDPRIREMEQRIQKTEEEWTNR 293


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.322    0.137    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,160,303
Number of Sequences: 27539
Number of extensions: 335658
Number of successful extensions: 751
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 746
Number of HSP's gapped (non-prelim): 6
length of query: 334
length of database: 12,573,161
effective HSP length: 82
effective length of query: 252
effective length of database: 10,314,963
effective search space: 2599370676
effective search space used: 2599370676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)