Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000286-TA|BGIBMGA000286-PA|IPR010849|DiGeorge syndrome
critical 6
(177 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75860.1 68414.m08811 expressed protein 31 0.57
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 30 1.0
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 29 1.3
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 2.3
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 28 4.1
At3g01100.1 68416.m00015 early-responsive to dehydration protein... 28 4.1
At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein lo... 27 5.4
At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam ... 27 5.4
At2g19880.1 68415.m02324 ceramide glucosyltransferase, putative ... 27 5.4
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 27 7.1
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 27 7.1
At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containi... 27 7.1
At2g42680.1 68415.m05283 ethylene-responsive transcriptional coa... 27 7.1
At2g20900.3 68415.m02465 diacylglycerol kinase, putative contain... 27 7.1
At2g20900.2 68415.m02464 diacylglycerol kinase, putative contain... 27 7.1
At2g20900.1 68415.m02463 diacylglycerol kinase, putative contain... 27 7.1
At4g10210.1 68417.m01674 hypothetical protein IB1C3-1 protein, A... 27 9.4
At1g16440.1 68414.m01966 protein kinase, putative similar to vir... 27 9.4
>At1g75860.1 68414.m08811 expressed protein
Length = 283
Score = 30.7 bits (66), Expect = 0.57
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 72 LFQQRLQV--INKHTLEIQKM--INNTTDPQQQDLQKALLLSR-HKEEMKQTDM--KLIM 124
L+QQ L V + + TL+ +K I +++ +K + HK +K TD KLI
Sbjct: 4 LYQQSLGVNQLKRITLDSKKAHRIEKKEKKEKRKEKKETKREKSHKHSIKATDNHHKLIF 63
Query: 125 QLDQKVSDQQVTLEKAGV 142
+KVSD+ +LEK+G+
Sbjct: 64 LPSKKVSDESDSLEKSGL 81
>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 1086
Score = 29.9 bits (64), Expect = 1.0
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 59 KGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDL-QKALLLSRHKEEMKQ 117
KGL ++ ++ FQQ+L++ N L + ++ QQ+L Q L ++ K
Sbjct: 581 KGLSQMTSFAQEMQFQQQLEMHNSSQLLRNQQEQSSLHSLQQNLSQNPQQLQMQQQSSKP 640
Query: 118 T-DMKLIMQLDQKVSDQQ 134
+ +L +QL QK+ QQ
Sbjct: 641 SPSQQLQLQLLQKLQQQQ 658
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 45 LANCLLNDTIFEIVKGLMEIQHVTEKHLFQQRLQ 78
+ N L + T F+I+K L ++ H+T +F LQ
Sbjct: 337 ITNGLDSSTAFQIIKSLQQVAHITNATVFVSLLQ 370
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 49 LLNDTIFEIVKGLMEIQHV-TEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALL 107
LL + +V+ +EIQH+ +E+ + LQ ++ E + + Q+ KAL+
Sbjct: 456 LLQEKESSLVEAKLEIQHLKSEQASLELLLQEKDEELAEARNKLGEVN--QEVTELKALM 513
Query: 108 LSRHKEEMKQTDM 120
+SR + M+ T+M
Sbjct: 514 ISREDQLMEATEM 526
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 27.9 bits (59), Expect = 4.1
Identities = 24/108 (22%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 34 QMRVPIELLSGLANCLLNDTIFEIVKGLMEIQHVTEKHLFQQRLQV---INKHTLEIQKM 90
Q+ +P+EL + L N +L T +V +++ + + Q + V +NK +++
Sbjct: 382 QIVLPLELRNKL-NRILLATNERLVNAKTDMEDLIAR--LNQEIAVKDYLNKKVNDLEGE 438
Query: 91 INNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTLE 138
+ T +++L++A++ R + Q DM+ +L QK + ++ L+
Sbjct: 439 LETTKQRSKENLEQAIMSERERFNQMQWDME---ELRQKSYEMEMKLK 483
>At3g01100.1 68416.m00015 early-responsive to dehydration
protein-related / ERD protein-related low similarity to
ERD4 protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 703
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 37 VPIELLSGLANCLLNDTIFEIVKGLMEIQHVTE 69
VP+ L+ GLAN +T F +KG++ ++ V++
Sbjct: 372 VPVVLVQGLANLHQLETWFPFLKGILNMKIVSQ 404
>At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein low
similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa
(EPI64 protein) {Homo sapiens}; contains Pfam profile
PF00566: TBC domain
Length = 777
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 40 ELLSGLANCLLNDTIFEIVKGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQ 99
+LL + LL EI LMEI + +++ + + E+Q+++ +D Q+
Sbjct: 614 KLLEEKRSALLRAEELEIA--LMEIVKEDNRRQLSAKVEQLEQEMAEVQRLL---SDKQE 668
Query: 100 QDLQKALLLSRHKEEMKQT-DMKLIMQLD 127
Q+ +L R ++E K T D ++ + D
Sbjct: 669 QEGAMLQVLMRVEQEQKVTEDARIFAEQD 697
>At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1720
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 93 NTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTLEK 139
N D + +D + ++L+++ EE+ + +KLI++L ++ S +Q L +
Sbjct: 1051 NDIDEEDED-EDGVILNQYDEEVAKAKLKLIIRLWKRWSSRQSELRE 1096
>At2g19880.1 68415.m02324 ceramide glucosyltransferase, putative
similar to ceramide glucosyltransferase (GI:14718995)
[Gossypium arboreum]; weak similarity to Ceramide
glucosyltransferase (Glucosylceramide synthase) (GCS)
(UDP-glucose:N-acylsphingosine D-glucosyltransferase)
(GLCT-1) (Swiss-Prot:Q16739) [Homo sapiens]
Length = 519
Score = 27.5 bits (58), Expect = 5.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 58 VKGLMEIQHVTEKHLFQQRLQVINKH--TLEIQKMINNTTDPQQQDLQKALLLSRHKEEM 115
V +M ++ E +L R Q+ + + LE ++ +T DP + + L + + E
Sbjct: 86 VSVVMPLKGFGEHNLHNWRSQITSLYGGPLEFLFVVESTEDPAYHAVSRLLSMYQDHVEA 145
Query: 116 KQTDMKLIMQLDQKVSDQQVTLEK 139
K L QK+ +Q + +EK
Sbjct: 146 KVVVAGLSTTCSQKIHNQLIGVEK 169
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 72 LFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKE 113
++++RLQ ++K E QK I D QQ+ Q+ + L E
Sbjct: 619 VYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVTLREELE 660
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 72 LFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKE 113
++++RLQ ++K E QK I D QQ+ Q+ + L E
Sbjct: 618 VYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVTLREELE 659
>At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containing
protein glutamine-rich tetratricopeptide repeat (TPR)
containing protein (SGT) - Rattus
norvegicus,PID:e1285298 (SP|O70593); contains Pfam
profile PF00515 TPR Domain
Length = 426
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 99 QQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTLEKAGVPGFFVTNKP 151
++ +KALLL H E +K+ I +QK+ ++Q ++ F T +P
Sbjct: 264 EKGFKKALLLDPHNESVKEN----IRVAEQKIREEQQRQRRSQNTSTFYTQEP 312
>At2g42680.1 68415.m05283 ethylene-responsive transcriptional
coactivator, putative similar to ethylene-responsive
transcriptional coactivator [Lycopersicon esculentum]
gi|5669634|gb|AAD46402
Length = 142
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 56 EIVKGLMEIQHVTEKHLFQQRL-QVINKHTLEIQKMINNTTDPQQQDLQK 104
E+ K +M+ + T+K L Q +L Q+IN+ IQ+ + P QQ L K
Sbjct: 82 ELKKAIMQAR--TDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSK 129
>At2g20900.3 68415.m02465 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 491
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 2 ELQEPTPEALQRKLYFLLEQLQ--DMARELPPKYQMRV 37
+L + TP+ + R++Y LE+L+ D AR++ K ++ V
Sbjct: 72 DLDQETPDKVLRRIYLNLERLKDDDFARQIREKLKIIV 109
>At2g20900.2 68415.m02464 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 491
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 2 ELQEPTPEALQRKLYFLLEQLQ--DMARELPPKYQMRV 37
+L + TP+ + R++Y LE+L+ D AR++ K ++ V
Sbjct: 72 DLDQETPDKVLRRIYLNLERLKDDDFARQIREKLKIIV 109
>At2g20900.1 68415.m02463 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 509
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 2 ELQEPTPEALQRKLYFLLEQLQ--DMARELPPKYQMRV 37
+L + TP+ + R++Y LE+L+ D AR++ K ++ V
Sbjct: 72 DLDQETPDKVLRRIYLNLERLKDDDFARQIREKLKIIV 109
>At4g10210.1 68417.m01674 hypothetical protein IB1C3-1 protein,
Arabidopsis thaliana, AJ011845 contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 375
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 74 QQRLQVINKHTLEIQKMIN 92
+Q+L++INKHT++I K N
Sbjct: 49 EQKLELINKHTVKIIKCTN 67
>At1g16440.1 68414.m01966 protein kinase, putative similar to viroid
symptom modulation protein [Lycopersicon esculentum]
gi|7672777|gb|AAF66637
Length = 431
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 89 KMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLD 127
K N TT + + KA L+SR+K QT+ +++ QLD
Sbjct: 65 KGANPTTYFAMKVMDKASLVSRNKLLRAQTEREILSQLD 103
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.136 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,769,869
Number of Sequences: 28952
Number of extensions: 137610
Number of successful extensions: 464
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 456
Number of HSP's gapped (non-prelim): 20
length of query: 177
length of database: 12,070,560
effective HSP length: 77
effective length of query: 100
effective length of database: 9,841,256
effective search space: 984125600
effective search space used: 984125600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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