GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000286-TA|BGIBMGA000286-PA|IPR010849|DiGeorge syndrome
critical 6
         (177 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.7  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 57  IVKGLMEIQHVTEKHLFQQRLQVINK 82
           +  G+++IQ  T  HL  QR+  + K
Sbjct: 165 VTTGIIKIQFATCAHLILQRVNHVKK 190


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 5   EPTPEALQRKLYFLLEQLQDMARELPPKY 33
           E   E  ++ ++FL    Q M +EL  KY
Sbjct: 75  EKQKEMTKKVIHFLSHNKQQMWKELTAKY 103


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)

Query: 61  LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTT 95
           LME+Q+    ++ + R Q++N++   + +  N T+
Sbjct: 193 LMELQYCHYLNILRVRYQLLNEYLETLVQETNRTS 227


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)

Query: 61  LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTT 95
           LME+Q+    ++ + R Q++N++   + +  N T+
Sbjct: 193 LMELQYCHYLNILRVRYQLLNEYLETLVQETNRTS 227


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 72  LFQQRLQVINKHTLEIQKM 90
           L  Q +QV+  H LE++K+
Sbjct: 146 LMVQAIQVLRFHLLELEKV 164


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,567
Number of Sequences: 317
Number of extensions: 1446
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 177
length of database: 114,650
effective HSP length: 53
effective length of query: 124
effective length of database: 97,849
effective search space: 12133276
effective search space used: 12133276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)