Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000286-TA|BGIBMGA000286-PA|IPR010849|DiGeorge syndrome
critical 6
(177 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 74 8e-14
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 33 0.100
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 31 0.53
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 31 0.53
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93
SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8) 30 1.2
SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4) 30 1.2
SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 30 1.2
SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25) 29 1.6
SB_21766| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-15) 29 1.6
SB_15217| Best HMM Match : Sec23_helical (HMM E-Value=2.9) 29 1.6
SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44) 29 1.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_48091| Best HMM Match : Coronavirus_5 (HMM E-Value=7.4) 29 2.1
SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_3902| Best HMM Match : Coronavirus_5 (HMM E-Value=9.7) 29 2.1
SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05) 29 2.1
SB_56331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 29 2.8
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17) 29 2.8
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 29 2.8
SB_52998| Best HMM Match : DUF827 (HMM E-Value=4.4) 29 2.8
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 28 3.7
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 28 5.0
SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 28 5.0
SB_12753| Best HMM Match : M (HMM E-Value=0.0006) 28 5.0
SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_47506| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_44126| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_39000| Best HMM Match : TolA (HMM E-Value=0.55) 27 6.5
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 27 6.5
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_38863| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=2.3) 27 8.7
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 73.7 bits (173), Expect = 8e-14
Identities = 36/82 (43%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 9 EALQRKLYFLLEQLQDMARELPPKYQMRVPIELLSGLANCLLNDTIFEIVKGLMEIQHVT 68
E QRK+ L QLQ + R +P KY+ + ++L+ +A LL+ T+FEIVKGL +IQ +T
Sbjct: 48 EVEQRKVTEYLTQLQALVRSIPSKYKGKFTYDVLADVATSLLDGTVFEIVKGLEDIQQLT 107
Query: 69 EKHLFQQRLQVINKHTLEIQKM 90
E++L +R++VIN H ++Q+M
Sbjct: 108 ERNLLNKRMKVINSH--KVQRM 127
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 81 NKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTLE-- 138
N+H ++ T + +++ + L R + E+ D KL+++LDQ V DQQ TLE
Sbjct: 321 NQHRPHHIPIVEKTNEEDKEEFFQKLE-QRLETEITSMDQKLVLELDQIVCDQQATLEVM 379
Query: 139 ----------KAGVPGFFVTNKPIEIKVQMYLLDFILRL 167
+AGVP FFVTN P ++++QMYLL+FI +L
Sbjct: 380 HVNQIVYDLQRAGVPLFFVTNNPDDVRLQMYLLEFIQQL 418
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 33.5 bits (73), Expect = 0.100
Identities = 16/86 (18%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 49 LLNDTIFEIVKGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLL 108
+++ +F++ + + Q+ + F + + +NK L+I++ + N T +++++ ++
Sbjct: 266 IVSQVLFDVARAEADKQNAVKVKEFAEIILQMNKERLQIERKLANFTKTSKKEVESEKVI 325
Query: 109 SRHKEEMKQTDMKLIMQLDQKVSDQQ 134
SR TD K +++L++ +S ++
Sbjct: 326 SR-------TDGKKVLELEKDISKKK 344
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 32.7 bits (71), Expect = 0.17
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 20 EQLQDMARELPPKYQMRVPIELLSGLANCLLNDTIFEIVKGLMEIQHVTEKHL-FQQRLQ 78
++LQ + +L Y+ R +E +A EI EI + E++ FQQ+L+
Sbjct: 601 KELQSVKEQLETGYRSRDVVESELAVATERCRQNAAEISDQQHEILSLNEENTAFQQQLE 660
Query: 79 VINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTL- 137
KH E+ + +++ LQ +L S K + Q + K I + + D+ +L
Sbjct: 661 KREKHIQELSESLDS--------LQDSLATSLEKNQSLQLEQKKIAHHHKSLQDEIFSLS 712
Query: 138 -EKAGV 142
EKA +
Sbjct: 713 EEKASL 718
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQ 128
+K + QQ+LQ+ K+T +Q M+ QQQ Q+ + ++ + +L Q Q
Sbjct: 48 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQ 107
Query: 129 KVSDQQVTLEK 139
+ QQ L++
Sbjct: 108 QQQQQQQQLQQ 118
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQ 128
+K + QQ+LQ+ K+T +Q M+ QQQ Q+ + ++ + +L Q Q
Sbjct: 47 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQ 106
Query: 129 KVSDQQVTLEK 139
+ QQ L++
Sbjct: 107 QQQQQQQQLQQ 117
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 31.9 bits (69), Expect = 0.30
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 59 KGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
KG +E++ +E ++ L + HT ++ I N + ++ + L + KEE+ +
Sbjct: 278 KGKLELRFESELYILFSIL--FSSHTPLLRVAITNASVSTRKPSGRGLRQKKSKEEVFKG 335
Query: 119 DMKLIMQLDQKVSDQQVTLEKAGVPGFFVTNKPIEIK 155
D+K QK+ ++ V LE G+P N EIK
Sbjct: 336 DLKYSA---QKLYEKGVILEIEGLPPAQFKNVQFEIK 369
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 31.1 bits (67), Expect = 0.53
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 63 EIQHVTEKHLFQQRLQVINKHTLEIQKMI-NNTTDPQQQDLQKALLLSRHKEEMKQTDMK 121
++Q ++ L QQ+ Q + + L+ Q+ + QQQ LQ+ L + + +Q ++
Sbjct: 1518 QLQQQQQQQLQQQQQQQLQQQQLQRQRELQQQQQQQQQQQLQRQRELQQQQHLQQQRQLQ 1577
Query: 122 LIMQ-LDQKVSDQQV 135
Q ++QK+ QQ+
Sbjct: 1578 QQQQYIEQKIRQQQL 1592
Score = 30.3 bits (65), Expect = 0.93
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQD-LQKALLLSRHKEEMKQTD 119
L + QH+ ++ QQ+ Q I + + Q T+ QQQ L + +H+++ +Q
Sbjct: 1564 LQQQQHLQQQRQLQQQQQYIEQKIRQQQLAHQQYTNQQQQQILYQQQQQLQHQQQQQQLQ 1623
Query: 120 MKLIMQLDQKVSDQQVTLEK 139
+ +Q Q++ +T ++
Sbjct: 1624 QQQQLQQQQRLPQHHLTQQQ 1643
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 31.1 bits (67), Expect = 0.53
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 63 EIQHVTEKHLFQQRLQVINKHTLEIQKMI-NNTTDPQQQDLQKALLLSRHKEEMKQTDMK 121
++Q ++ L QQ+ Q + + L+ Q+ + QQQ LQ+ L + + +Q ++
Sbjct: 172 QLQQQQQQQLQQQQQQQLQQQQLQRQRELQQQQQQQQQQQLQRQRELQQQQHLQQQRQLQ 231
Query: 122 LIMQ-LDQKVSDQQV 135
Q ++QK+ QQ+
Sbjct: 232 QQQQYIEQKIRQQQL 246
Score = 30.3 bits (65), Expect = 0.93
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQD-LQKALLLSRHKEEMKQTD 119
L + QH+ ++ QQ+ Q I + + Q T+ QQQ L + +H+++ +Q
Sbjct: 218 LQQQQHLQQQRQLQQQQQYIEQKIRQQQLAHQQYTNQQQQQILYQQQQQLQHQQQQQQLQ 277
Query: 120 MKLIMQLDQKVSDQQVTLEK 139
+ +Q Q++ +T ++
Sbjct: 278 QQQQLQQQQRLPQHHLTQQQ 297
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 30.3 bits (65), Expect = 0.93
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 63 EIQHVTEKHL-FQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMK---QT 118
EI+H+ K +R + ++K+ E++ + + D Q DL+ L +SR EE + Q
Sbjct: 481 EIKHLVRKLADVTEREEKLSKNLEELKAQLKHERDAAQ-DLRSTLDISRDAEEQRQHQQG 539
Query: 119 DMKLIMQLDQKVSDQQVTLEK 139
+++ + + Q++ ++ LEK
Sbjct: 540 ELEALKKEHQELKEKSEDLEK 560
>SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8)
Length = 235
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQ 128
+K + QQ+LQ+ K+T +Q M+ QQQ Q+ +++++Q ++ Q
Sbjct: 156 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQ---QPQQQQLQQQQLQQQQLQQQ 212
Query: 129 KVSDQQVTL 137
++ QQ+ +
Sbjct: 213 QLQQQQMLM 221
>SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4)
Length = 167
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQ 128
+K + QQ+LQ+ K+T +Q M+ QQQ Q+ +++++Q ++ Q
Sbjct: 88 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQ---QPQQQQLQQQQLQQQQLQQQ 144
Query: 129 KVSDQQVTL 137
++ QQ+ +
Sbjct: 145 QLQQQQMLM 153
>SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12)
Length = 1650
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 36 RVPIELLSGLANCLLNDTIFEIVKGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINN 93
++P ++ L+ L +D + ++V+ + E HL +RL+ + KH+ +K + N
Sbjct: 1596 KLPKKIRHALSKALRSDPVMKVVESFAK----EETHLMNERLKGVTKHSRIAEKHVRN 1649
>SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25)
Length = 319
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
L ++HV E H +Q ++ + +H L Q I +T D+ ++ S H + M T
Sbjct: 232 LSVVEHVLEHHDVEQMMRSVGQHILNGQMPITEST-TMTADVPNYIVQSEHVQSMPIT 288
>SB_21766| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-15)
Length = 281
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
L ++HV E H +Q ++ + +H L Q I +T D+ ++ S H + M T
Sbjct: 194 LSVVEHVLEHHDVEQMMRSVGQHILNGQMPITEST-TMTADVPNYIVQSEHVQSMPIT 250
>SB_15217| Best HMM Match : Sec23_helical (HMM E-Value=2.9)
Length = 200
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
L ++HV E H +Q ++ + +H L Q I +T D+ ++ S H + M T
Sbjct: 113 LSVVEHVLEHHDVEQMMRSVGQHILNGQMPITEST-TMTADVPNYIVQSEHVQSMPIT 169
>SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44)
Length = 603
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 62 MEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMK 121
M+IQ ++++ QQ++Q + + L+ Q+++ QQQ + RH+++ +Q +
Sbjct: 270 MKIQQQQQQYIQQQQVQHMQQQRLQQQQLLQQHLQRQQQQQR------RHQQQQQQQQLH 323
Query: 122 LIMQLDQ 128
+L+Q
Sbjct: 324 QQQRLEQ 330
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 1.6
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 11 LQRKLYFLLEQLQDMARELPPKY-QMRVPIELLSGLANCLLNDTIFEIVKGLMEIQHVTE 69
L+RK LL + +D RE K + L L N+ ++VK E+
Sbjct: 2798 LERKTIQLLRERRDSKREFEGKLSESEKERSPLLEKIEALENENR-DLVKQCKELS---- 2852
Query: 70 KHLFQQR--LQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKL 122
++L ++R + + K + +K + + Q +K LLL + KEE++Q + +L
Sbjct: 2853 RNLLERRRETEAVKKEMVATEKKVKLFLEKQNLLEEKLLLLQKTKEELRQKETEL 2907
Score = 27.5 bits (58), Expect = 6.5
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 47 NCLLNDTIFEIVKGLMEIQHVTEKHLFQQ----RLQVINKHTLEIQKMINNTTDPQQQDL 102
N L+D + E+ G+ I + E+ L +LQ + + ++K +NN + ++++
Sbjct: 1968 NSKLSDILNELNSGIENI--LNEETLSDSDPNVKLQKLREKFENLEKQVNNVKEEAEKNV 2025
Query: 103 QKALLLSRHKEEMKQTDMKLIMQLD-QKVSDQ 133
Q+ L+ E+ Q +M +I++ D Q+VS Q
Sbjct: 2026 QEKDQLTGFLHEVNQ-EMDVILKDDVQRVSVQ 2056
>SB_48091| Best HMM Match : Coronavirus_5 (HMM E-Value=7.4)
Length = 141
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMI---NNTTDPQQQDLQKALLLSRHKEEMKQ 117
+K + QQ+LQ+ K+T +Q M+ PQQQ LQ+ L + M+Q
Sbjct: 79 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQPQQQQLQQQQLQQQQMLMMQQ 130
>SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 75 QRLQVINKHTLEIQKM---INNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVS 131
+R VI + L I ++ ++N +++D+ ++SR K+ M T+ + ++S
Sbjct: 257 ERRTVIQQAQLNIDQLKATVHNIEHKREEDMHSTSMMSRDKDSMLATERSQMASRLAEIS 316
Query: 132 DQQ 134
D+Q
Sbjct: 317 DEQ 319
>SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 59 KGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
KGL + Q L+V K T + + NN + + RH EE+K+T
Sbjct: 102 KGLQNYLDKVQHFCKQTDLKVNIKKTKIL--IFNNNDSKMSSHTNSSDFIYRHLEELKKT 159
Query: 119 DMKLIMQLDQKVSD 132
MK + +L +++ D
Sbjct: 160 VMKALYKLRKELGD 173
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 53 TIFEIVKGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKAL 106
++ E+ L+E + + EK + QR++ ++ L+IQKM D + DL++ L
Sbjct: 1635 SVSELKGELVEAEALKEKFIQLQRVERALRNDLQIQKMEIQRKDGRIDDLERKL 1688
>SB_3902| Best HMM Match : Coronavirus_5 (HMM E-Value=9.7)
Length = 109
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMI---NNTTDPQQQDLQKALLLSRHKEEMKQ 117
+K + QQ+LQ+ K+T +Q M+ PQQQ LQ+ L + M+Q
Sbjct: 47 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQPQQQQLQQQQLQQQQMLMMQQ 98
>SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)
Length = 375
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 86 EIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQ--LDQKVSDQQVTLEKAGVP 143
E Q+ NTT + +D + + + + K E +T ++I + LDQ+ ++ V +E AG+
Sbjct: 40 EEQEKSRNTT-VKDEDSKTDVKIKKEKTEEDETLEEIIREYDLDQEDQEEGVRMEGAGMA 98
Query: 144 G--FFVTNK 150
G ++ +NK
Sbjct: 99 GLTYYASNK 107
>SB_56331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMI---NNTTDPQQQDLQKALLLSRHKEEMKQ 117
+K + QQ+LQ+ K+T +Q M+ PQQQ LQ+ L + M+Q
Sbjct: 2 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQPQQQQLQQQQLQQQQMLMMQQ 53
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 67 VTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTD----MKL 122
+ E H Q + + H+ E ++ T+D Q Q L+ + H ++ K + K
Sbjct: 677 IGETHYQQGKYEEARGHSKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEAIGHSKE 736
Query: 123 IMQLDQKVSDQQ 134
++L QK SD Q
Sbjct: 737 ALRLYQKTSDDQ 748
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 67 VTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTD----MKL 122
+ + H FQ + + H E ++ T+D Q Q L+ H ++ K + K
Sbjct: 637 IGKTHNFQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGETHYQQGKYEEARGHSKE 696
Query: 123 IMQLDQKVSDQQ 134
++L QK SD Q
Sbjct: 697 ALRLYQKTSDDQ 708
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 52 DTIFEIVKGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRH 111
+ I E+ + + E+ Q ++ H+ E+ + N +QQ + +LSR
Sbjct: 91 EKIHELESSYRKEKSTREEEFDNQMWELKQGHSKEVASLKQNF---EQQKTELEQMLSRE 147
Query: 112 KEEMKQTDMKLIMQLDQK----VSDQQVTLEK 139
K EM++ + ++ QK +S+ + TLEK
Sbjct: 148 KSEMREARTREQNEMQQKFKRELSELRETLEK 179
>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
Length = 1178
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 87 IQKMINNTTDPQQQDLQKALLLSRHKE-EMKQTDMKLIMQLDQKVSDQQVTLEKAGVPGF 145
I+K +D D+ + L+L + E + K + +LIM++D+K+ + + AG+ G
Sbjct: 726 IEKFDKKLSD-LSMDMNEQLILIKDLECQQKNSRKELIMEMDRKLDETKQDKVLAGLKGL 784
Query: 146 FVTNKPIEIKVQMYLLD 162
++ + K++ LD
Sbjct: 785 QSSHSKLGNKIRETKLD 801
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 16 YFLLEQLQDMARELPPKYQMRVPIELLSGLANCLLNDTIFEIVKGLMEIQHVTEKH---- 71
YF+L D+ PK +++L L+ ++T+ + ++ H+ + H
Sbjct: 64 YFMLSTNNDINHSQTPKLMNIRRVDILESLSISSGDETVSNQSPAMAQMMHIMDTHISTD 123
Query: 72 -LFQQRLQVINKHTLEIQKMINNTTDPQQQD 101
++Q L + + E + I++ D QQD
Sbjct: 124 VMYQPTLDSLQPNLDEFVEHISSLADLIQQD 154
>SB_52998| Best HMM Match : DUF827 (HMM E-Value=4.4)
Length = 202
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 87 IQKMINNTTDPQQQDLQKALLLSRHKE-EMKQTDMKLIMQLDQKVSDQQVTLEKAGVPGF 145
I+K +D D+ + L+L + E + K + +LIM++D+K+ + + AG+ G
Sbjct: 5 IEKFDKKLSD-LSMDMNEQLILIKDLECQQKNSRKELIMEMDRKLDETKQDKVLAGLKGL 63
Query: 146 FVTNKPIEIKVQMYLLD 162
++ + K++ LD
Sbjct: 64 QSSHSKLGNKIRETKLD 80
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 61 LMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDM 120
L Q + ++ QQ+ Q I H Q+ + Q+ L++ H+E++KQ
Sbjct: 694 LQHQQRIQQQQRLQQQQQRIQLH----QEQLKQQQQLHQEQLKQQQQQQLHREQLKQKQQ 749
Query: 121 KLIMQLDQKVSDQQ 134
+ + Q K QQ
Sbjct: 750 QQLHQEQLKQQQQQ 763
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/66 (21%), Positives = 35/66 (53%)
Query: 74 QQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQ 133
Q+++++ K E ++ + +++ +Q L + +EE K+ D + + +++ D+
Sbjct: 603 QEQMELERKRREEEERKRKQEEEERKRKMQMELQRRKEEEEQKKRDEEERKRREKEEKDR 662
Query: 134 QVTLEK 139
Q LEK
Sbjct: 663 QFQLEK 668
>SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 88 QKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSDQQVTLEKA 140
+K++ T L K LLS ++ + KL Q+ QKV D+ + KA
Sbjct: 256 KKVVIYTKKNTNAYLPKQFLLSAFQDHTNRMRQKLADQMQQKVDDEDERIAKA 308
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 59 KGLMEIQHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQT 118
+G++E + + FQ Q INK ++ K ++ + + L+KA + + +Q
Sbjct: 227 RGVLEYKQDKFEKRFQDCKQQINKTLSQVIKAVSQKAEEMIEQLEKAHKTRQKALDCQQE 286
Query: 119 DMKL 122
D++L
Sbjct: 287 DLRL 290
>SB_12753| Best HMM Match : M (HMM E-Value=0.0006)
Length = 304
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/98 (18%), Positives = 40/98 (40%)
Query: 65 QHVTEKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIM 124
+H ++ ++++Q +N + + N T+ ++AL EE+ K
Sbjct: 41 KHCAKEKQLRRQIQALNTRITGLSRREENKTEDDSSQEKQALTKESLLEEITHVTKKPEF 100
Query: 125 QLDQKVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLD 162
+K+ Q+T K+ + K +E + Q L+
Sbjct: 101 FEKEKILQDQITSLKSQIACIVSEKKKLETENQNIYLE 138
>SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 74 QQRLQVINKHTLEIQK-MINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSD 132
+Q+ +V + E+QK + Q+Q++Q+ +EE KQ + K +Q +QK +
Sbjct: 62 EQKQKVQEEQKQEVQKEQKQEEQEEQKQEVQEEQK-QEEQEEQKQEEQKQEVQEEQKQEE 120
Query: 133 QQ 134
Q+
Sbjct: 121 QE 122
>SB_47506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 68 TEKHLFQQRLQVINKHTLEIQKMINNT 94
++ L QQRLQ+ +H+ E++KM++ T
Sbjct: 37 SKSQLEQQRLQLQREHSNEMEKMLDKT 63
>SB_44126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQK 104
+K + QQ+LQ+ K+T +Q M+ QQQ Q+
Sbjct: 2 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQQQQ 37
>SB_39000| Best HMM Match : TolA (HMM E-Value=0.55)
Length = 576
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 72 LFQQRLQVINKHT-LEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKV 130
L QQRL+ +K +E++ + ++ ++ SR +EE+KQ D + ++ +K+
Sbjct: 340 LEQQRLEADSKRLEMEMEALAKEKVKRKEVHAKQVDEWSRFEEELKQRDAEKTLRDAEKL 399
Query: 131 SDQQVTLE 138
D + LE
Sbjct: 400 KDFERHLE 407
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 27.5 bits (58), Expect = 6.5
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 19 LEQLQDMARELPPKYQMRVP-IELLSGLANCLLNDTIFEIVKGLMEIQHVTEKHLFQQRL 77
+E L A+E + +P ++ + N + + EI + + E Q T QR
Sbjct: 204 IESLLQQAKEFCKAIEETIPTLDTVVAEVNKRTKNVLSEI-EVIFEYQVTT----LWQRK 258
Query: 78 QVINKHTLEIQKMINNTTDPQQQDLQKALLLSRH 111
+ + L I+K + QQQ LQK+L L RH
Sbjct: 259 KELRDQVLGIKKSRSLALKEQQQRLQKSLQLLRH 292
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 74 QQRLQVINKHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLDQKVSD 132
Q+R Q + LEIQ+ + +++ + L+ K E K+ ++ L +L + V D
Sbjct: 721 QKRQQQMMIRALEIQQKADERERQKEEKRMEKKLIKERKLEQKRRELILTRELKKPVED 779
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 69 EKHLFQQRLQVIN-KHTLEIQKMINNTTDPQQQDLQKALLLSRHKEEMKQTDMKLIMQLD 127
E+ + +Q+ +V N +H LE +M QQQ L + + + E D K + +L+
Sbjct: 575 EEAVDEQKKKVSNLEHQLEKNRMEVQALSEQQQALNDQIKHIKQEVEKTTPDEKRVKELE 634
Query: 128 QKVSDQQVTLEKA 140
V+ + +KA
Sbjct: 635 TVVAKHEKEWKKA 647
>SB_38863| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=2.3)
Length = 284
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 69 EKHLFQQRLQVINKHTLEIQKMINNTTDPQQQDLQ 103
+K + QQ+LQ+ K+T +Q M+ QQQ Q
Sbjct: 228 KKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQQQ 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.136 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,309,956
Number of Sequences: 59808
Number of extensions: 190683
Number of successful extensions: 765
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 699
Number of HSP's gapped (non-prelim): 79
length of query: 177
length of database: 16,821,457
effective HSP length: 78
effective length of query: 99
effective length of database: 12,156,433
effective search space: 1203486867
effective search space used: 1203486867
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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