Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000285-TA|BGIBMGA000285-PA|IPR000618|Insect cuticle
protein
(460 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 35 0.098
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 34 0.17
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 34 0.17
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 33 0.52
At3g20250.1 68416.m02565 pumilio/Puf RNA-binding domain-containi... 32 0.69
At3g16857.2 68416.m02153 two-component responsive regulator fami... 32 0.69
At3g16857.1 68416.m02152 two-component responsive regulator fami... 32 0.69
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 32 0.92
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 32 0.92
At4g08630.1 68417.m01420 expressed protein ; expression supporte... 31 1.2
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 31 1.2
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 31 2.1
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At5g46780.2 68418.m05763 VQ motif-containing protein contains PF... 30 2.8
At5g46780.1 68418.m05762 VQ motif-containing protein contains PF... 30 2.8
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 30 2.8
At1g51405.1 68414.m05786 myosin-related low similarity to nonmus... 30 2.8
At2g30530.1 68415.m03718 expressed protein 30 3.7
At4g18465.1 68417.m02740 RNA helicase, putative similar to SP|Q1... 29 4.9
At2g25250.1 68415.m03021 expressed protein 29 4.9
At4g37740.1 68417.m05343 expressed protein identical to transcri... 29 6.5
At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid t... 29 6.5
At1g02205.2 68414.m00154 CER1 protein identical to maize gl1 hom... 29 6.5
At1g02205.1 68414.m00153 CER1 protein identical to maize gl1 hom... 29 6.5
At3g45800.1 68416.m04957 hypothetical protein 29 8.5
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 35.1 bits (77), Expect = 0.098
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 233 IPPGIQYAAPSVSQVPVPRITQYFT-PTQYSSGASYIASTAAQYLPT-VKHAGAALNQVV 290
I P + P+ S P + T P+ S A +S A + P V+H+ ++
Sbjct: 117 IDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSPAVSHSPPPVRHSSPPVSHSS 176
Query: 291 VPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTP 338
P+S+ SS P S+ HSSP VAA S P A S+ S+P
Sbjct: 177 PPVSH------SSPPTSRSSPAVSHSSPVVAA-SSPVKAVSSSTASSP 217
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 34.3 bits (75), Expect = 0.17
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 13/191 (6%)
Query: 181 HQGPVVSQVFAAPTVRYAASPALKAQQNAQVDSTQYSTGVQYNQVQNLPALQIPPGIQYA 240
H+G + +P +R SP AQ + V +S + P P Y+
Sbjct: 1504 HEGMMSPNYLLSPNMRL--SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS-PTSPGYS 1560
Query: 241 APSVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPISNGYSKG 300
S P +PT S Y + T+ Y PT + + + P S YS
Sbjct: 1561 PTSPGYSPTSPGYSPTSPTYSPSSPGY-SPTSPAYSPT-SPSYSPTSPSYSPTSPSYSPT 1618
Query: 301 LSS-APAYSSASFTRHS-SPAVAAYS--RPAIAPVSTHYSTPVISHYS--TPGVAQV-PE 353
S +P S S T S SP AYS PA +P S YS P YS +P + P
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYS-PTSPSYSPTSPSYSPTSPS 1677
Query: 354 YLGARSNYAST 364
Y +Y+ T
Sbjct: 1678 YSPTSPSYSPT 1688
Score = 31.1 bits (67), Expect = 1.6
Identities = 53/251 (21%), Positives = 82/251 (32%), Gaps = 14/251 (5%)
Query: 40 GYSYPAPGIQLTHSGINVAPAPAVVSQPTASIKYTPAIQYAAQPTYQTVESNYI-TAPVY 98
GYS +PG T G + P S + T P+Y +Y T+P Y
Sbjct: 1558 GYSPTSPGYSPTSPGYS--PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 99 TKELHGYXXXXXXXXXXXXXKTVTPLATYAQAPIIAKITAAPLIAKFSVAPAKTTYYSQN 158
+ Y + T A +P + + A S +P +Y +
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1675
Query: 159 NVQQXXXXXXXXXXXXXXXNTVHQGPVVSQVFAAPTVRYA-ASPAL-KAQQNAQVDSTQY 216
+ P S ++ + Y+ SP+ + S +Y
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPAYSPT-SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY 1734
Query: 217 STGVQYN--QVQNLPALQIPP-GIQYAAPSVSQVPV-----PRITQYFTPTQYSSGASYI 268
S + Y+ + PA P Y+ S S P P Y + YSSGAS
Sbjct: 1735 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 1794
Query: 269 ASTAAQYLPTV 279
S +A Y PT+
Sbjct: 1795 YSPSAGYSPTL 1805
Score = 31.1 bits (67), Expect = 1.6
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 234 PPGIQYAAPSVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPI 293
P Y+ S S P +P+ + SY + T+ Y PT + + + P
Sbjct: 1589 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPT-SPSYSPTSPAYSPT 1646
Query: 294 SNGYSKGLSSAPAYSSASFTRHSSPAVAAYS--RPAIAPVSTHYSTPVISHYSTPGVAQV 351
S YS ++PAYS S + SP +YS P+ +P S YS P YS A
Sbjct: 1647 SPAYSP---TSPAYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPAYS 1700
Query: 352 P 352
P
Sbjct: 1701 P 1701
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 34.3 bits (75), Expect = 0.17
Identities = 44/176 (25%), Positives = 66/176 (37%), Gaps = 12/176 (6%)
Query: 213 STQYSTGVQY-NQVQNLPALQIPPGIQYAAPSVSQVPVPRITQYFTPTQYSSGASYIAST 271
S STG + + V + PA P + A S TP+ + G+S + T
Sbjct: 43 SNPSSTGFGFGSSVSSTPASSTTPSFGFGASSTPSFGFGSSASSSTPS-FGFGSS-ASVT 100
Query: 272 AAQYLPTVKHAGAALNQVVVPISNGYS--KGLSSAPAYSSASFTRHSSPAVAAYSRPAIA 329
A P+ AA + P G S S+AP S F S+ + A S
Sbjct: 101 PASTTPSFGFGTAASSSAPAPSLFGSSTTNASSAAPGSSPFGFVTSSASSTATPSSSLFG 160
Query: 330 PVSTHYSTPVISHY-------STPGVAQVPEYLGARSNYASTPSLTIGGHISSANS 378
++ +TP S + STP P A S+ +++ S G S+A S
Sbjct: 161 APASSAATPSSSPFGAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSSAATS 216
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 32.7 bits (71), Expect = 0.52
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 16/149 (10%)
Query: 241 APSVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPISNGYSKG 300
+PS SQ P Q TP+ + S S S + L + G +
Sbjct: 440 SPSFSQPTTPSFGQPTTPS-FRSTVSNTTSVFGSSSSLTTNTSQPLGSSIF----GSTPA 494
Query: 301 LSSAPAYSSASFTRHSSPAVAAYSRPAIAPVST---HYSTPVISHYSTPGVAQVPEYLGA 357
S P +S F S + S P+ A +T ++P+ +TP + Q G
Sbjct: 495 HGSTPGFSIGGFNNSQSSPLFG-SNPSFAQNTTPAFSQTSPLFGQNTTPALGQSSSVFGQ 553
Query: 358 RSNYA-------STPSLTIGGHISSANSV 379
+N A STPS G SS++S+
Sbjct: 554 NTNPALVQSNTFSTPSTGFGNTFSSSSSL 582
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 277 PTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAI-APVSTHY 335
P++ A +Q V +N +S+ ++ S SF++ ++P+ + P+ + VS
Sbjct: 408 PSIFSTSPAFSQTPVNPTNPFSQTTPTSNTNFSPSFSQPTTPSFGQPTTPSFRSTVSNTT 467
Query: 336 STPVISHYSTPGVAQV--PEYLGARSNYASTPSLTIGGHISSANS 378
S S T +Q G+ + STP +IGG +S +S
Sbjct: 468 SVFGSSSSLTTNTSQPLGSSIFGSTPAHGSTPGFSIGGFNNSQSS 512
>At3g20250.1 68416.m02565 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (8 copies at C-terminus)
Length = 961
Score = 32.3 bits (70), Expect = 0.69
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 26/199 (13%)
Query: 192 APTVRYAASPALKAQQNAQVDSTQYSTGV---QYNQVQNLPALQIPPGIQYAAPS-VSQV 247
AP Y ++ A + S+G+ QYN PA I P PS + V
Sbjct: 379 APPPMYTSTAAYMTSLSPFYHQNFQSSGMFVPQYNYGGYPPASGIVPQYMSGYPSHEATV 438
Query: 248 PVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPISNGYSKGL---SSA 304
P+P + + SSG + + LP V +G + +V P Y + + A
Sbjct: 439 PMP-----YDISSTSSGYNN-----PRLLPGVSSSGQNIPSLVDPFQLQYFQQAQVDAYA 488
Query: 305 PAYSSA--SFTRHSSPAVA--AYSRPAIAPVSTHYSTPVISHYST-----PGVAQVPEYL 355
P + S+ SF + AV A P +P+S Y H PGV +P+Y
Sbjct: 489 PPFQSSTDSFGQKDQQAVGYMANHEPLNSPLSPGYGLQSPRHMGNYFAVPPGVRVMPQYP 548
Query: 356 GARSNYASTPSLTIGGHIS 374
G+ PS +GG +S
Sbjct: 549 GSPLASPVMPSSPVGGMMS 567
>At3g16857.2 68416.m02153 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 690
Score = 32.3 bits (70), Expect = 0.69
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 213 STQYSTG-VQYNQVQNLPALQIPPGIQYAAPSVSQVPVPRITQYFTPTQYSSGA----SY 267
+TQ+S+ + YN Q P L + +AP +S VPV + T Y S SY
Sbjct: 500 TTQHSSSSMPYNNFQ--PELPVNSFPLASAPGIS-VPVRKATSYQEEVNSSEAGFTTPSY 556
Query: 268 IASTAAQYLPTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVA 321
T Q +++ G A + + S S++ AYSS+S +RH++ A
Sbjct: 557 DMFTTRQNDWDLRNIGIAFDSH----QDSESAAFSASEAYSSSSMSRHNTTVAA 606
>At3g16857.1 68416.m02152 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 669
Score = 32.3 bits (70), Expect = 0.69
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 213 STQYSTG-VQYNQVQNLPALQIPPGIQYAAPSVSQVPVPRITQYFTPTQYSSGA----SY 267
+TQ+S+ + YN Q P L + +AP +S VPV + T Y S SY
Sbjct: 500 TTQHSSSSMPYNNFQ--PELPVNSFPLASAPGIS-VPVRKATSYQEEVNSSEAGFTTPSY 556
Query: 268 IASTAAQYLPTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVA 321
T Q +++ G A + + S S++ AYSS+S +RH++ A
Sbjct: 557 DMFTTRQNDWDLRNIGIAFDSH----QDSESAAFSASEAYSSSSMSRHNTTVAA 606
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 31.9 bits (69), Expect = 0.92
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 206 QQNA-QVDSTQYSTGVQYNQVQNLPALQIPPGIQYAAPSVSQVPVPRITQYFTPT--QYS 262
QQN D STGV + +L PP I+Y A S P PR T +PT ++
Sbjct: 11 QQNPFSTDDGGQSTGVSLSSRTSLS----PPLIRYPAGSPDFSPGPRCTTQPSPTFSDFT 66
Query: 263 SGASYIAS--TAAQYLPTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPA 319
+ + S A + P+ + ++Q++ S+ ++ S + A SS+ + +SP+
Sbjct: 67 QASPSLTSFNNPASFTPSFSFSN--IHQMIPTPSSSHNSKASVSSASSSSFYFPQTSPS 123
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 31.9 bits (69), Expect = 0.92
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 234 PPGIQYAAPSVSQVPV-PRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVP 292
P +Q S +P P + + + Q A+T P KH + P
Sbjct: 77 PQAVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQAPIRKHPTPQPMPMPPP 136
Query: 293 ISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYST 345
+ + S P +S H +PAV + S P + V + P SH+ T
Sbjct: 137 PPSVSANSAQSQPRFSHPQRQGHLNPAVTSMSHPQSSQVQN--APPPASHHPT 187
>At4g08630.1 68417.m01420 expressed protein ; expression supported
by MPSS
Length = 845
Score = 31.5 bits (68), Expect = 1.2
Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 9/155 (5%)
Query: 200 SPALKAQQNAQVDSTQYSTGVQYNQ--VQNLPALQIPPGIQYAAPSVSQVPVPRITQYFT 257
+P L+ + + V Y++ +P++ + G + + Q
Sbjct: 259 NPPLRHPHAVAQPPSNGESDVDYDESYTSGMPSIGLAGGRSMRPRTPLSIRTKEQPQTGL 318
Query: 258 PTQYSSGASYIASTAAQYLPTVKHAGAALNQVV------VPISNGYSKGLSSAPAYSSAS 311
PT S + Y ST + + T+ H NQV ISN S+ LS+ SA
Sbjct: 319 PTSGSRSSLYEDSTESSAMSTLTHPSQTTNQVEQSPSARSAISNKSSQSLSAMDQPPSAR 378
Query: 312 FTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYSTP 346
+ + P A P+ P+S TP +TP
Sbjct: 379 SSFNGRPIRTAPLMPSSVPISLKPVTPAFQS-NTP 412
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 31.5 bits (68), Expect = 1.2
Identities = 38/129 (29%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
Query: 257 TPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPI---SNGYSKGLSSAPAYSSAS-- 311
TP +S ST + T +G A P S + G S PA+ ++S
Sbjct: 199 TPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASGTPAFGASGTPAFGASSTP 258
Query: 312 -FTRHSSPAVAAYSRPAIAPVST----HYSTPVISHYSTPGVAQVPEYLGARSNYASTPS 366
F S+PA A S PA ST +T S S+P Q G+ S + STPS
Sbjct: 259 AFGASSTPAFGASSTPAFGGSSTPSFGASNTSSFSFGSSPAFGQSTSAFGS-SAFGSTPS 317
Query: 367 LTIGGHISS 375
G S+
Sbjct: 318 PFGGAQAST 326
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 30.7 bits (66), Expect = 2.1
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 222 YNQVQNL-PALQIPPGIQYAAPSVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVK 280
Y++VQN P I + + P + ++ I + FTP QY G ++I Y+ +
Sbjct: 507 YSEVQNTGPGAAITKRVTW--PGIKKLSDEEILK-FTPAQYIQGDAWIPGKGVPYILGLF 563
Query: 281 HAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVS 332
+ N V + S + + S T +SP P+ P S
Sbjct: 564 SGNGSTNSTVT--GSSLSSNTTESSDSPSTVVTPSTSPPAGHLGSPSDTPSS 613
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 30.7 bits (66), Expect = 2.1
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Query: 308 SSASFTRHSSPAVAA-YSRPAIAPVSTHYSTPVISHYSTPGVAQVPEYLGARSNYASTPS 366
+S SF H P + Y P I PV+T P + +S Y +
Sbjct: 15 NSQSFVPHPEPRIGTNYLYPDIPPVNT---VPHLEAHSLQEPYDNNSMFYGPPQYHHQHA 71
Query: 367 LTIGGHISSANSVKNVHTEFLENYDAHPRYAFEYGVNDPHTGDIKQQKEERD 418
+G +S+A N + ++ NY+A P + +G ND G + + ER+
Sbjct: 72 SNLGSGMSTA---PNFYVPYV-NYEAPPSFLLSHGSNDAVVG-VTSTEHERN 118
>At5g46780.2 68418.m05763 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 44 PAPGIQLTHSGINVAPAPAVVSQPTASIKYTPAIQYAAQPTYQTVES 90
PAP QL H P P V S P AS P Q+++ P + +
Sbjct: 92 PAPLTQLNHPPPPPPPPPPVQSVPIASEPVQPVNQFSSNPAESPISA 138
>At5g46780.1 68418.m05762 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 44 PAPGIQLTHSGINVAPAPAVVSQPTASIKYTPAIQYAAQPTYQTVES 90
PAP QL H P P V S P AS P Q+++ P + +
Sbjct: 92 PAPLTQLNHPPPPPPPPPPVQSVPIASEPVQPVNQFSSNPAESPISA 138
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 30.3 bits (65), Expect = 2.8
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 357 ARSNYASTPSLTIGGHISSANSVKNVHTEFLENYDAHPRYAFEYGVNDPHTGDIKQQKEE 416
+R NY S+ S I S +K VH + + YAF + HT D+K ++
Sbjct: 143 SRLNYESSES-KIKREFESYGPIKRVHLVTDQLTNKPKGYAF---IEYMHTRDMKAAYKQ 198
Query: 417 RDGEVVKGQYSLVEPDGSVRTV 438
DG+ + G+ LV+ + RTV
Sbjct: 199 ADGQKIDGRRVLVDVERG-RTV 219
>At1g51405.1 68414.m05786 myosin-related low similarity to nonmuscle
myosin heavy chain from Gallus gallus [GI:212449],
Xenopus laevis [GI:214624], Homo sapiens [GI:641958]
Length = 487
Score = 30.3 bits (65), Expect = 2.8
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 345 TPGVAQVPEYLGARSNYASTPSLTIGGHISSANSVKNVHTEFLENYD-AHPRYAFEYGVN 403
TP + Q+P R N + T+ SS+ + V E L + + R A VN
Sbjct: 24 TPRILQLPRRHSVRRNASKGLKTTVS---SSSQKDRRVKLEVLFHQERTFDRGASIVMVN 80
Query: 404 DPHTGDIKQQKE-ERDGEVVKGQYSLVEPDGSVRTVDYVADWETGFHADVRNSKDN 458
D + G+ K ++E R G+V G+ V S VD V + + F A++ S+ N
Sbjct: 81 D-NGGEKKDEEEGRRRGKVADGREIGVSGLSSSSAVDEVEEAKWRFQAEMLRSECN 135
>At2g30530.1 68415.m03718 expressed protein
Length = 371
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 302 SSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYSTPGVAQVP 352
SS+P+ SSAS S A ++ + AI S H + + S YS+P A VP
Sbjct: 38 SSSPSPSSAS-----SSAASSLAAKAIRASSAHRDSSLSSAYSSPSSAPVP 83
>At4g18465.1 68417.m02740 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 704
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 290 VVPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYSTPGVA 349
+V +SN + SS+ Y++ R P V Y + V H +T ++ +
Sbjct: 21 IVFMSNNLASSSSSSYGYANIEKQRQRLP-VYKYRTEILYLVENHATTIIVGETGSGKTT 79
Query: 350 QVPEYL 355
Q+P+YL
Sbjct: 80 QIPQYL 85
>At2g25250.1 68415.m03021 expressed protein
Length = 155
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 201 PALKAQQNAQVDSTQYSTGVQYNQVQNLPALQIPPGIQYAAPSVSQVPVP 250
P LK+ + D + ST ++ + +++PAL + +P S+VP+P
Sbjct: 77 PDLKSNRQIGSDPMKISTPIRISNRKSMPALFYAGPVTSTSPPPSEVPLP 126
>At4g37740.1 68417.m05343 expressed protein identical to
transcription activator GRL2 [Arabidopsis thaliana]
GI:21539882 (unpublished); supporting cDNA
gi|21539881|gb|AY102635.1|
Length = 535
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 300 GLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYSTPGVAQVPEYLGARS 359
G + A +S + T P VA + + A S++ S + S Y P +P G S
Sbjct: 274 GQNQTAAAASKAVTTPQQPVVAGNTNRSNARASSNRSLAIGSQYINPSTESLPNNRGV-S 332
Query: 360 NYASTPSL 367
Y ST +L
Sbjct: 333 IYPSTVNL 340
>At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 208
Score = 29.1 bits (62), Expect = 6.5
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 271 TAAQYLPTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAP 330
T QY P AG ++ + I ++ L++ A + H + + P +P
Sbjct: 81 TVLQYNPQCICAGL-VSAGEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASP 139
Query: 331 VSTHYSTPVISHYSTPGVAQVPEYLGARSNYASTPSLTIGGHISSANSVKNV 382
VS P S P A+ PE + TPS+T SS ++ +V
Sbjct: 140 VSPSAGAPTTS----PSAAKSPETSATSPSSDETPSMTAPSPSSSGTNILSV 187
>At1g02205.2 68414.m00154 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 625
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 383 HTEFLENYDAH-PRYAFEYGVNDPHTGDIKQQKEERDGEVV 422
HT+F NY P Y + YG D T + ++ ER ++V
Sbjct: 252 HTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGDDIV 292
>At1g02205.1 68414.m00153 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 580
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 383 HTEFLENYDAH-PRYAFEYGVNDPHTGDIKQQKEERDGEVV 422
HT+F NY P Y + YG D T + ++ ER ++V
Sbjct: 252 HTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGDDIV 292
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 243 SVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPISNGYSKGLS 302
+V+Q+P+P Q S ++ A T PTV+ A A +Q I G + G
Sbjct: 239 TVNQLPIPNGQQNHLHQNQWSTPNHQACTLGA--PTVQPA--ANDQTFFSI--GTNLGAP 292
Query: 303 SAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISH-YSTPGV 348
+ P ++ + +S PA PA+ P + P H Y+ P V
Sbjct: 293 TVPPGANDHWFPYSDPACTNLGAPAVPPEANSQWLPYTDHAYNYPVV 339
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.125 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,741,243
Number of Sequences: 28952
Number of extensions: 395022
Number of successful extensions: 888
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 868
Number of HSP's gapped (non-prelim): 38
length of query: 460
length of database: 12,070,560
effective HSP length: 84
effective length of query: 376
effective length of database: 9,638,592
effective search space: 3624110592
effective search space used: 3624110592
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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