Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000284-TA|BGIBMGA000284-PA|undefined
         (76 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   0.56 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   1.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.3  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    19   6.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   6.9  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    19   9.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   9.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   9.1  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 0.56
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 30  EFRDFDSLLEHLRLRNLAKKFEYKWDTDRLQ 60
           E  ++D+  E +R   + K   + WD+ RL+
Sbjct: 714 EANNYDTAEEAIRDIKIGKLMAFIWDSSRLE 744


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 17  IILPRNVHTDEPKEFRDF 34
           IIL  NV+ D+  E+R F
Sbjct: 101 IILSSNVYIDKSTEYRFF 118


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 19  LPRNVHTDEPKEFRDFDSLLEHLRLRN 45
           LP+ V T      R F  LL++ ++ N
Sbjct: 534 LPKTVRTPTDSYIRSFFELLQNPKVSN 560


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase
          protein.
          Length = 200

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 28 PKEFRDFDSL 37
          PK+F D DSL
Sbjct: 84 PKDFGDVDSL 93


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 28  PKEFRDFDSL 37
           PK+F D DSL
Sbjct: 100 PKDFGDVDSL 109


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 18.6 bits (36), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 4   GGRDYTRGPGGQI 16
           G  +  RGPGG++
Sbjct: 105 GQSEVQRGPGGRL 117


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 18.6 bits (36), Expect = 9.1
 Identities = 6/18 (33%), Positives = 9/18 (50%)

Query: 53  KWDTDRLQNREPNKTPES 70
           +WD+D        K P+S
Sbjct: 199 EWDSDYTDKSNEKKIPKS 216


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.6 bits (36), Expect = 9.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)

Query: 59  LQNREPNKTPESFWNA 74
           L++R+P +TP  + N+
Sbjct: 416 LKSRDPERTPYQWDNS 431


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.138    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,441
Number of Sequences: 429
Number of extensions: 1096
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 76
length of database: 140,377
effective HSP length: 46
effective length of query: 30
effective length of database: 120,643
effective search space:  3619290
effective search space used:  3619290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
S2: 36 (18.6 bits)