GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000284-TA|BGIBMGA000284-PA|undefined
         (76 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XPN7 Cluster: Putative type III effector protein; n=3...    36   0.16 
UniRef50_Q14563 Cluster: Semaphorin-3A precursor; n=53; Euteleos...    33   1.5  
UniRef50_UPI00004982E7 Cluster: hypothetical protein 11.t00035; ...    31   3.4  
UniRef50_Q5ULP3 Cluster: Orf71; n=1; Lactobacillus phage LP65|Re...    31   3.4  
UniRef50_Q8IBL1 Cluster: Putative uncharacterized protein MAL7P1...    31   5.9  
UniRef50_P32494 Cluster: Transcriptional adapter 3; n=2; Sacchar...    31   5.9  
UniRef50_UPI00006D0047 Cluster: hypothetical protein TTHERM_0076...    30   7.9  
UniRef50_A5TX54 Cluster: Putative uncharacterized protein; n=1; ...    30   7.9  
UniRef50_A1Z9K4 Cluster: CG8085-PA, isoform A; n=6; Sophophora|R...    30   7.9  
UniRef50_A3DM43 Cluster: Putative uncharacterized protein; n=1; ...    30   7.9  

>UniRef50_Q8XPN7 Cluster: Putative type III effector protein; n=3;
           Ralstonia solanacearum|Rep: Putative type III effector
           protein - Ralstonia solanacearum (Pseudomonas
           solanacearum)
          Length = 309

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 26  DEPKEFRDFDSLLEHLRLRNLAKKFEYKWD 55
           D   E R  D L++  RLRN  +KF+YKWD
Sbjct: 165 DAQAEPRSLDQLIDVARLRNEPRKFQYKWD 194


>UniRef50_Q14563 Cluster: Semaphorin-3A precursor; n=53;
           Euteleostomi|Rep: Semaphorin-3A precursor - Homo sapiens
           (Human)
          Length = 771

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 11  GPGGQIIILPRNVHTDEPKEFRDFDSLLEHLRLRNLAKKFEYKWDTDRLQNRE-PNKTPE 69
           G G +   +  ++   +   +RDF  L+ H  L  + +  E  W  DR Q R+ P  TP 
Sbjct: 683 GDGSKTKEMSNSMTPSQKVWYRDFMQLINHPNLNTMDEFCEQVWKRDRKQRRQRPGHTPG 742

Query: 70  SFWNAKH 76
           +    KH
Sbjct: 743 NSNKWKH 749


>UniRef50_UPI00004982E7 Cluster: hypothetical protein 11.t00035;
          n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
          protein 11.t00035 - Entamoeba histolytica HM-1:IMSS
          Length = 172

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 27 EPKEFRDFDSLLEHLRLRNLAK------KFEYKWDTDRLQNREPNKTPESFWN 73
          +PKEF+  D + E  RL+ L        KF+    T+ ++N +PN+T E  +N
Sbjct: 47 KPKEFKFRDEITEEERLQKLIALPKTMIKFKLPDGTELIRNFKPNQTTEDLYN 99


>UniRef50_Q5ULP3 Cluster: Orf71; n=1; Lactobacillus phage
          LP65|Rep: Orf71 - Lactobacillus phage LP65
          Length = 104

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 31 FRDFDSLLEHLRLRNLAKKFEYKWDT-DRLQNREPNKTPESFWNAK 75
          F  + + L+ L  + LAK  ++KWDT D  +     KT  +FW  K
Sbjct: 49 FSGYSNYLQDLVDKTLAKNPDFKWDTFDDFKKFAGAKTQHTFWAVK 94


>UniRef50_Q8IBL1 Cluster: Putative uncharacterized protein
           MAL7P1.129; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.129 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1003

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 21  RNVHTDEPKEF-RDFDSLLEHLRLRNLAKKFEYKWDTDRLQNRE 63
           + +  D+ K+  RD +  +E  R + + K  E +WD DR +NRE
Sbjct: 615 KQMERDKEKQMERDREKQMERDREKQMEKDREKEWDRDRERNRE 658


>UniRef50_P32494 Cluster: Transcriptional adapter 3; n=2;
           Saccharomyces cerevisiae|Rep: Transcriptional adapter 3
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 702

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 23  VHTDEPKEFRDFDSLLEHLRLRN----LAKKFEYKWDTDRLQNREPNKTPES 70
           VH D+P+E R FDS  E+    N         + K D D+++N    K P+S
Sbjct: 175 VHRDQPREKRPFDSETENRATENENTQRPDNKKQKIDVDKMENDPTVKNPKS 226


>UniRef50_UPI00006D0047 Cluster: hypothetical protein
           TTHERM_00760840; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00760840 - Tetrahymena
           thermophila SB210
          Length = 511

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 7   DYTRGPGGQIIILPRNVHTDEPKEFRDFDSLLEHLRLRNLAKKFEYKWDTDRLQNRE 63
           D+T G   +III  + ++ ++ K F+ FD +  H ++  L ++F+ K   D+L  +E
Sbjct: 399 DFTNGQLIEIII-QKQIYCNKQKYFQ-FDQINNHNQINTLNERFKLKLKIDQLFKKE 453


>UniRef50_A5TX54 Cluster: Putative uncharacterized protein; n=1;
           Fusobacterium nucleatum subsp. polymorphum ATCC
           10953|Rep: Putative uncharacterized protein -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 237

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 26  DEPKEFRDFDSLLEHLRLRNLAKKFEYK 53
           D  KEF D+  L++ L+ ++LA  F+YK
Sbjct: 107 DNQKEFDDYCDLIDELKAKSLAYGFDYK 134


>UniRef50_A1Z9K4 Cluster: CG8085-PA, isoform A; n=6; Sophophora|Rep:
           CG8085-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 571

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 23  VHTDEPKEFRDFDSLLEHLRLRNLAKKFEYKWDTDRLQNRE 63
           +H DE    +D D+++E+L++R L K F Y  D D +Q  E
Sbjct: 309 LHKDELLRLKDMDAIIEYLQVR-LHKNFGYS-DDDAIQALE 347


>UniRef50_A3DM43 Cluster: Putative uncharacterized protein; n=1;
          Staphylothermus marinus F1|Rep: Putative
          uncharacterized protein - Staphylothermus marinus
          (strain ATCC 43588 / DSM 3639 / F1)
          Length = 557

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 18 ILPRNVHTDEPKEF--RDFDSLLEHLRLRNLAKKFEYKW 54
          I+PRN+H  + K F  RD+  L ++L  R  ++   Y+W
Sbjct: 58 IVPRNIHGLKLKRFRVRDYQVLSDYLYRRLYSESIRYRW 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.138    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,407,287
Number of Sequences: 1657284
Number of extensions: 3694753
Number of successful extensions: 7775
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7771
Number of HSP's gapped (non-prelim): 10
length of query: 76
length of database: 575,637,011
effective HSP length: 55
effective length of query: 21
effective length of database: 484,486,391
effective search space: 10174214211
effective search space used: 10174214211
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)