Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000282-TA|BGIBMGA000282-PA|IPR000618|Insect cuticle
protein
(64 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26731| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.6
SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07) 25 6.6
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.6
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 25 6.6
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 25 6.6
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 25 8.7
SB_54414| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.7
SB_43805| Best HMM Match : YscO (HMM E-Value=6) 25 8.7
SB_30612| Best HMM Match : HSP9_HSP12 (HMM E-Value=6.7) 25 8.7
>SB_26731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 14 SVHDHHTGDVKSQHELRHG-DVVRGG 38
S+ DHHT DV S ++ HG DV R G
Sbjct: 79 SLDDHHTPDVPSLDDILHGTDVSREG 104
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 29 LRHGDVVRGGYELVEPDGRFRK 50
L GD GYE VE DGRF +
Sbjct: 98 LPEGDYEEPGYESVETDGRFER 119
>SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 27.1 bits (57), Expect = 2.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 11 FAYSVHDHHTGDVKSQHELRHG 32
+ Y+ H HH G + H+ HG
Sbjct: 302 YEYTDHSHHLGPARVVHDFNHG 323
>SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 13 YSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHT 59
+ V DH T D K QHEL +R + + D + K + HT
Sbjct: 566 FEVSDHVTPDEKYQHELNKNRALRDRIDSLTRDIELTESRIK-EQHT 611
>SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07)
Length = 383
Score = 25.4 bits (53), Expect = 6.6
Identities = 17/55 (30%), Positives = 20/55 (36%)
Query: 10 KFAYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHTGYDFS 64
K S H + K L GD R LVE G R+V D Y +S
Sbjct: 97 KLGMSSPKHSSALDKETTVLSEGDETRSDVGLVEEGGEGRRVYDDEDGGVAYSYS 151
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 36 RGGYELVEPDGRFRKVEYKADDHTGY 61
+G Y+ + DGR R +EY + GY
Sbjct: 1742 KGSYDTHDVDGRRRTIEYYSGTPQGY 1767
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 25.4 bits (53), Expect = 6.6
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 7/55 (12%)
Query: 2 YTTAFPEYKFAYSVHDHHTGDVKS---QHELRHGDVVRGGYELVEPDGRFRKVEY 53
Y P Y Y +DHH D H+ H D YE EP+ +R + Y
Sbjct: 79 YHVIEPHYHDDYHYYDHHYDDYHHDDYHHDYHHHDYHHDHYE--EPE--YRSLHY 129
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 2 YTTAFPEYKFA---YSVHDHHTGDVKSQHELRHGDVVRGGYE 40
YT A KF+ + + +T + +HE R G+ VR GYE
Sbjct: 215 YTKALKTKKFSKLEFRLRHPYTIALVERHEHRGGEEVREGYE 256
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 40 ELVEPDGRFRKVEYKADDHTGYDFS 64
E + PD +K+ Y ++ T Y+F+
Sbjct: 168 EFITPDNLDKKIAYALENETNYNFA 192
>SB_54414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 5 AFPEYKFAYSVHDH--HTGDVKSQHELRHGDVVRGGYELVEPD 45
A P+ + DH + GD ++ + H DV Y+ + PD
Sbjct: 62 ASPDNDAGKPIEDHTGNDGDDENHDKCHHNDVADDAYDDIPPD 104
>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
Length = 243
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 40 ELVEPDGRFRKVEYKADDHTGYDFS 64
E + PD +K+ Y ++ T Y+F+
Sbjct: 168 EFITPDNLDKKIAYALENETNYNFA 192
>SB_30612| Best HMM Match : HSP9_HSP12 (HMM E-Value=6.7)
Length = 184
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 24 KSQHELRHGDVVRGGYELVEPDGRFRK 50
K Q + GD+VR ++PD R K
Sbjct: 77 KPQRSIDKGDIVRSSDSCLKPDARHNK 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.139 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,568,294
Number of Sequences: 59808
Number of extensions: 88985
Number of successful extensions: 190
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 12
length of query: 64
length of database: 16,821,457
effective HSP length: 43
effective length of query: 21
effective length of database: 14,249,713
effective search space: 299243973
effective search space used: 299243973
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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