Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000282-TA|BGIBMGA000282-PA|IPR000618|Insect cuticle
protein
(64 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13890.1 68417.m02152 glycine hydroxymethyltransferase, putat... 31 0.13
At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putat... 29 0.38
At2g43910.1 68415.m05458 thiol methyltransferase, putative simil... 27 2.1
At1g77800.1 68414.m09059 PHD finger family protein contains Pfam... 26 3.6
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 25 4.7
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 25 4.7
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to... 25 6.3
At1g32415.1 68414.m04001 pentatricopeptide (PPR) repeat-containi... 25 6.3
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P... 25 8.3
At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical ... 25 8.3
At1g56660.1 68414.m06516 expressed protein 25 8.3
At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putat... 25 8.3
At1g08490.1 68414.m00940 cysteine desulfurase, putative similar ... 25 8.3
>At4g13890.1 68417.m02152 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 470
Score = 30.7 bits (66), Expect = 0.13
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 6 FPEYKFAYSVHDHHTG-DVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHTGY 61
F Y HD G D+ S + HG GG + F + YK D TGY
Sbjct: 111 FAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGY 167
>At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 471
Score = 29.1 bits (62), Expect = 0.38
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 6 FPEYKFAYSVHDHHTG-DVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHTGY 61
F Y HD G D+ S L HG GG ++ F + YK + TGY
Sbjct: 111 FAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGY 167
>At2g43910.1 68415.m05458 thiol methyltransferase, putative similar
to thiol methyltransferase 1 GI:14583119 from [Brassica
oleracea]
Length = 227
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 39 YELVEPDGRFRKVEYKADDHTG 60
YEL++PDG + Y DH G
Sbjct: 158 YELLKPDGELITLMYPITDHVG 179
>At1g77800.1 68414.m09059 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1423
Score = 25.8 bits (54), Expect = 3.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 18 HHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEY 53
H D K + R GD +R G +E + FR++++
Sbjct: 104 HSGADKKKKKSSRQGDKLRSGSIWLEHEDYFRRLDF 139
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 25.4 bits (53), Expect = 4.7
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 7 PEYKFAYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADD 57
PE + A V D +L G RG E V P+ R V+ +DD
Sbjct: 174 PERRRATPVRDQRENSKPVDQQLWPGASRRGSSESVVPNSLSRSVDSDSDD 224
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 25.4 bits (53), Expect = 4.7
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 7 PEYKFAYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADD 57
PE + A V D +L G RG E V P+ R V+ +DD
Sbjct: 174 PERRRATPVRDQRENSKPVDQQLWPGASRRGSSESVVPNSLSRSVDSDSDD 224
>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 805
Score = 25.0 bits (52), Expect = 6.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 7 PEYKFAYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVE 52
PE +F V D HT D K QH L +V GY L + + R V+
Sbjct: 284 PE-EFKSLVPDFHTDDTKFQHIL---GLVNMGYRLKKTEWNTRCVD 325
>At1g32415.1 68414.m04001 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 761
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 28 ELRHGDVVRGGYELVEPDGRFRK 50
E H V+ G+E V+ DGR K
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAK 343
>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 808
Score = 24.6 bits (51), Expect = 8.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 7 PEYKFAYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVE 52
PE +F V D HT D++ QH L +V GY L + + R V+
Sbjct: 307 PE-EFKSLVPDFHTDDIEFQHIL---GLVNMGYRLKKTEWNTRCVD 348
>At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical to
XRN3 [Arabidopsis thaliana] gi|11875628|gb|AAG40732
Length = 1020
Score = 24.6 bits (51), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 36 RGGYELVEPDGRFRKVEYKADDHTG 60
RGGY+ P GRF Y++ G
Sbjct: 925 RGGYQPRGPSGRFPSEPYQSQSREG 949
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 24.6 bits (51), Expect = 8.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 24 KSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHT 59
K+ E +H DV + EL E DG+ K + K + T
Sbjct: 152 KADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGT 187
>At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 599
Score = 24.6 bits (51), Expect = 8.3
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 22 DVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKADDHTGY 61
D S + HG GG ++ F YK D TGY
Sbjct: 258 DSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGY 297
>At1g08490.1 68414.m00940 cysteine desulfurase, putative similar to
nitrogen fixation protein (nifS) GB:D64004 GI:1001701
from [Synechocystis sp]; contains TIGRFAM TIGR01364:
phosphoserine aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 463
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 12 AYSVHDHHTGDVKSQHELRHGDVVRGGYELVEPDGRFRKVEYKA 55
+++V H D+ + + +HG +R G+ +P R+ V A
Sbjct: 389 SFNVEGLHPTDLATFLDQQHGVAIRSGHHCAQPLHRYLGVNASA 432
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.139 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,784,866
Number of Sequences: 28952
Number of extensions: 61858
Number of successful extensions: 115
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 13
length of query: 64
length of database: 12,070,560
effective HSP length: 44
effective length of query: 20
effective length of database: 10,796,672
effective search space: 215933440
effective search space used: 215933440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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