Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000279-TA|BGIBMGA000279-PA|IPR000618|Insect cuticle
protein
(128 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36039| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.032
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 32 0.17
SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 30 0.68
SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15) 29 0.90
SB_16423| Best HMM Match : ATE_C (HMM E-Value=0.00015) 29 1.2
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 29 1.6
SB_4026| Best HMM Match : MSSP (HMM E-Value=1.3) 28 2.1
SB_50021| Best HMM Match : rve (HMM E-Value=0.043) 28 2.1
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 28 2.8
SB_38479| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2) 27 4.8
SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 27 4.8
SB_6711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.4
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.4
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 26 8.4
SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2) 26 8.4
>SB_36039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 34.3 bits (75), Expect = 0.032
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 24 HDGGYAPSAHYAPDTYVVPLEQYATPLEYA--GQYDGHDEYA 63
HD YAP YAPD P ++YA YA +Y D YA
Sbjct: 28 HDDRYAPDDRYAPDDRYAPDDRYAPDDRYAPDDRYAPDDRYA 69
Score = 31.5 bits (68), Expect = 0.22
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 25 DGGYAPSAHYAPDTYVVPLEQYATPLEYA--GQYDGHDEYAHPKYDFAYSVADPHTGDHK 82
D YAP YAPD P ++YA YA +Y D YA D Y+ D + D +
Sbjct: 5 DDRYAPDDRYAPDDRYAPDDRYAHDDRYAPDDRYAPDDRYAP---DDRYAPDDRYAPDDR 61
Query: 83 SQHESR 88
+ R
Sbjct: 62 YAPDDR 67
Score = 30.7 bits (66), Expect = 0.39
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 28 YAPSAHYAPDTYVVPLEQYATPLEYA--GQYDGHDEYAHPKYDFAYSVADPHTGDHKSQH 85
YAP YAPD P ++YA YA +Y D YA D Y+ D + D +
Sbjct: 2 YAPDDRYAPDDRYAPDDRYAPDDRYAHDDRYAPDDRYAP---DDRYAPDDRYAPDDRYAP 58
Query: 86 ESR 88
+ R
Sbjct: 59 DDR 61
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 25 DGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGH 59
D YAP YAPD P ++YA YA G+
Sbjct: 41 DDRYAPDDRYAPDDRYAPDDRYAPDDRYAPDDKGN 75
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 31.9 bits (69), Expect = 0.17
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 25 DGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQ 84
DG YA +YA Y + T YA Y YA +D + +TG + +
Sbjct: 198 DGYYAGDGYYAGGNYAGGIY---TDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYAD 254
Query: 85 HESRDGDSVHGYYSLVQPDGSVRKVEYTADDH-NGY 119
DG GYY+ DG+ Y +H +GY
Sbjct: 255 GNYTDGYYAGGYYA----DGNYAGGNYADGNHTDGY 286
Score = 30.7 bits (66), Expect = 0.39
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 7 GLYHGHGQAVSSQSIIRHDGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPK 66
G Y G A + + GG +YA Y + Y YAG Y YA
Sbjct: 79 GYYAGGNYADGNHDDSNYAGGNYTGGNYADGNYT---DGY-----YAGGYYADGNYAGGN 130
Query: 67 YDFAYSVADPHTGDHKSQHESRDGDSVHGYYS 98
Y + +TG + + DG+ GYY+
Sbjct: 131 YADGNHIDGNYTGGNYADGNYADGNYTDGYYA 162
Score = 29.9 bits (64), Expect = 0.68
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 25 DGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQ 84
DG YA +YA Y Y T YA Y YA +D + +TG + +
Sbjct: 52 DGYYAGDGYYAGGNYAGG--NY-TDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYAD 108
Query: 85 HESRDGDSVHGYYSLVQPDGSVRKVEYTADDH 116
DG GYY+ DG+ Y +H
Sbjct: 109 GNYTDGYYAGGYYA----DGNYAGGNYADGNH 136
Score = 29.5 bits (63), Expect = 0.90
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 7 GLYHGHGQAVSSQSIIRHDGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPK 66
G Y G A + + + GGY +Y Y YA YAG Y YA
Sbjct: 365 GNYAGGNYAGGNYAGGNYAGGYYADGYYTDGNYTDG--NYAGG-NYAGGYYADGNYADGN 421
Query: 67 YDFAYSVADPHTGDHKSQHESRDGDSVHGYYS 98
Y Y + + + DG+ GYY+
Sbjct: 422 YADGYYADGYYADSNYADGYYADGNYAGGYYA 453
Score = 29.5 bits (63), Expect = 0.90
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 25 DGGYAPSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQ 84
DG YA +YA Y YA YAG YA Y + +TG + +
Sbjct: 759 DGNYA-GGNYAGGNYAGG--NYAGG-NYAGGNYADGNYADGNYADGNHIDGNYTGGNYAY 814
Query: 85 HESRDGDSVHGYYSLVQPDGSVRKVEYTADDHN 117
DG+ GYY+ DG+ V + HN
Sbjct: 815 GNYTDGNYTDGYYA----DGNYADVNHGYKTHN 843
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 26 GGYAPSAHYAPDTYV--VPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKS 83
GGY +YA Y + Y YA Y YA Y + G + +
Sbjct: 409 GGYYADGNYADGNYADGYYADGYYADSNYADGYYADGNYAGGYYASGNYADGNYAGGNYA 468
Query: 84 QHESRDGDSVHGYYS 98
DG+ GYY+
Sbjct: 469 DGNYEDGNYAGGYYA 483
Score = 26.2 bits (55), Expect = 8.4
Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 12/113 (10%)
Query: 7 GLYHGHGQAVSSQSI--IRHDGGYAPSAHYAPDTYVVPLEQYATPLEYAG-QYDGHDEYA 63
G Y G G I DG YA +YA Y + YAG Y G + YA
Sbjct: 199 GYYAGDGYYAGGNYAGGIYTDGNYA-DGYYAGGNYA---DGNHDDSNYAGGNYTGGN-YA 253
Query: 64 HPKYDFAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQPDGSVRKVEYTADDH 116
Y Y + + + DG+ GYY+ DG+ YT ++
Sbjct: 254 DGNYTDGYYAGGYYADGNYAGGNYADGNHTDGYYA----DGNYTDGNYTGGNY 302
>SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 584
Score = 29.9 bits (64), Expect = 0.68
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 10 HGHGQAVSSQSIIRHDGGYAPSA-HYAPDTY-VVPLEQYATPLEYAGQYDGHDEYAHPKY 67
HG+ + + H AP H P Y VP +A P Y G+ E AH Y
Sbjct: 306 HGYHEVAHGYYEVPHVYLAAPHGYHEMPHGYHEVPHGYHAVPHGYNEVPHGYHEVAHGYY 365
Query: 68 DFAY-SVADPHTGDHKSQHESRDGDSVHGYYSL 99
+ + +A PH G H+ H + HGY+++
Sbjct: 366 EVPHLYLAAPH-GYHEMPHGYH--EVPHGYHAV 395
Score = 29.9 bits (64), Expect = 0.68
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 10 HGHGQAVSSQSIIRHDGGYAPSA-HYAPDTY-VVPLEQYATPLEYAGQYDGHDEYAHPKY 67
HG+ + + H AP H P Y VP +A P Y G+ E AH Y
Sbjct: 355 HGYHEVAHGYYEVPHLYLAAPHGYHEMPHGYHEVPHGYHAVPHGYNEVPHGYHEVAHGYY 414
Query: 68 DFAYSV-ADPHTGDHKSQHESRDGDSVHGYYSL 99
+ + A PH G H+ H ++ HGY+ +
Sbjct: 415 EVPHGYPAAPH-GYHEVPHGYH--EAPHGYHEV 444
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 33 HYAPDTY-VVPLEQYATPLEYAGQYDGHDEYAHPKYDFAY-SVADPHTGDHKSQHESRDG 90
H P Y VP +A P Y G+ E AH Y+ + +A PH G H+ H
Sbjct: 281 HAVPHGYHEVPHGYHAVPHGYNEVPHGYHEVAHGYYEVPHVYLAAPH-GYHEMPHGYH-- 337
Query: 91 DSVHGYYSL 99
+ HGY+++
Sbjct: 338 EVPHGYHAV 346
>SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)
Length = 846
Score = 29.5 bits (63), Expect = 0.90
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 56 YDGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGD-SVHGYYS 98
YD Y YD Y+VA +G +++ H +R D SV G YS
Sbjct: 675 YDQASLYTAQVYDAVYAVAHATSGLYRNGHVTRGNDWSVVGEYS 718
>SB_16423| Best HMM Match : ATE_C (HMM E-Value=0.00015)
Length = 192
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 9 YHGHGQAVSSQSIIRHDGGYAPSAHYAPDTY-VVPLEQYATPLEYAGQYDGHDE 61
Y+ G + S +R+ G Y PS P+TY VP+EQ L+ A +Y D+
Sbjct: 67 YYYMGFYIHSCPKMRYKGNYYPSYLVCPETYRWVPIEQCRPKLD-ANKYSRLDQ 119
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 4 AKAGLYHGHGQAVSSQSIIRHDG-GY---APSAHYAPDT-YVVPLEQYATPLEYAGQY 56
++ G+Y+ H S +S++ DG GY + AP+T P +Q+A P Y Y
Sbjct: 191 SRGGVYYYHRDEASGKSMVSRDGDGYESDTDRSRKAPETDSQKPQDQHAVPQAYHMHY 248
>SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1558
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 101 QPDGSVRKVEYTADDHNGYDLNKI 124
+ DG VR TA DH Y +NKI
Sbjct: 281 EDDGPVRNFVCTAPDHKNYGINKI 304
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 53 AGQYDGHDEYAHPKYD----FAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQPDGSVRK 108
A +Y+G E++H K Y D +TG + +R G V Y ++ SV
Sbjct: 1183 ADRYEG--EWSHGKISGFGKMKYMHGDTYTGHWRDN--TRHGHGVMSYGAMSSSAASVYI 1238
Query: 109 VEYTADDHNGY 119
E++AD NGY
Sbjct: 1239 GEWSADRKNGY 1249
>SB_4026| Best HMM Match : MSSP (HMM E-Value=1.3)
Length = 109
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 20 SIIRHDGGYAPSAHYAPD 37
S+ R D GYAP+A +APD
Sbjct: 5 SVPRMDKGYAPNAQFAPD 22
>SB_50021| Best HMM Match : rve (HMM E-Value=0.043)
Length = 662
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 5 KAGLYHGHGQAVSSQSIIRHDGGYAPSAHYAPDTYVVP-LEQYATPLEYAGQYDGHDEYA 63
K GL H + + I+ G PD Y V L+Q TPL + + H +
Sbjct: 102 KTGLKLNHEKCFIKKQEIKFFGVICGKEGVKPDPYKVSVLQQMQTPLRELLKEENHFTWD 161
Query: 64 HPKYDFAY 71
P+Y A+
Sbjct: 162 PPEYQVAF 169
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 57 DGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSV--HGYYSLVQPDGSVRKVEYTAD 114
DG + H +Y+ GD +H+ DGDSV H Y+ D VR +Y D
Sbjct: 1859 DGDSDVRHDEYN-------DEDGDSDVRHDDYDGDSVVRHDDYNDDNGDSDVRHDDYDGD 1911
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 5 KAGLYHGHGQAVSSQSIIRHDGGYAPSAHYAPDTYVVPLEQYATPLEYAGQ 55
+A +G+ Q S Q + AP Y+P TY+ + P AGQ
Sbjct: 345 QATFQYGYSQRNSQQGGFAYSYLNAPPPAYSPRTYITQMNSTPPPNTVAGQ 395
>SB_38479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 40 VVPLEQYATPLEYAGQYDGHDEYA 63
VVPL+Q P + QYDG D Y+
Sbjct: 30 VVPLQQRILPGFHGHQYDGRDVYS 53
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 68 DFAYSVADPHTGDHK 82
DFAY DPHT HK
Sbjct: 1425 DFAYVARDPHTSKHK 1439
>SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2)
Length = 185
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 44 EQYATPLEYAGQYDGHDEYAHPKYDFAYSVA 74
E TP Y G+ DG D HP + Y VA
Sbjct: 9 ESGPTPDPYEGEGDGKDRKKHPGFPKRYIVA 39
>SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 69 FAYSVADPHTGDHKSQHESRDG--DSVHGYYSLVQPDGSVR 107
F + H GDH+S HE + G D G ++ +P+ +R
Sbjct: 97 FFFFAVSQH-GDHQSHHEEKRGLQDLAQGLHACARPEKLIR 136
>SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 44 EQYATPLEYAGQYDGHDEYAHPKYDFAYSVA 74
E TP Y G+ DG D HP + Y VA
Sbjct: 9 ESGPTPDPYEGEGDGKDRKKHPGFPKRYIVA 39
>SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 44 EQYATPLEYAGQYDGHDEYAHPKYDFAYSVA 74
E TP Y G+ DG D HP + Y VA
Sbjct: 9 ESGPTPDPYEGEGDGKDRKKHPGFPKRYIVA 39
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 29 APSAHYAPDTYVVPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQHESR 88
AP+ AP T P Y T +Y+ D + D YS D + + QH+ R
Sbjct: 53 APTTTTAPTTTTTPNNDYNTSDDYSTNNDYSTNNDYSTSD-EYSTNDDYNTKQRLQHQRR 111
>SB_6711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 52 YAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGY 96
Y YD + P YD S+ +P D+ S +E D D++ Y
Sbjct: 26 YEPPYDDNLSIYEPPYDDNLSIYEPLDDDNLSIYEPLDDDNLSIY 70
>SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 56 YDGHDEYAHPKYDFAYSVADPHTGDHKSQHE 86
YD +D+Y KYDF + DP+ D E
Sbjct: 140 YDKYDKY--DKYDFPWKAIDPNLPDMPEDKE 168
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 26.2 bits (55), Expect = 8.4
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 24 HDGGYAPSAHYAPDTYVVPLEQYATPLEYAG-QYDGHDEYAHPKYDFAYSVADPHTGDHK 82
+DGGY Y + Y Y Y G YD +D Y YD Y P G
Sbjct: 449 YDGGYGQGGGY--EGYS---GGYRDDYGYGGGSYDHYDSYYGGGYDDYYGGGPPRGGPRG 503
Query: 83 SQHESRDG 90
+ SR G
Sbjct: 504 GRGGSRGG 511
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 45 QYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQHE 86
QY P + + +Y H +Y Y+ PH H+ H+
Sbjct: 73 QYTHPYTHPYTHQYTHQYTHHQYTHQYTHQYPHQYPHQYPHQ 114
>SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2)
Length = 772
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/69 (21%), Positives = 27/69 (39%)
Query: 57 DGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQPDGSVRKVEYTADDH 116
DG D Y+ P+ V+D G G+ G+ + D ++ T +D+
Sbjct: 669 DGRDGYSSPRTSMDSRVSDDVMGKRVDDSPGFAGEQRDGFRDGIGDDMVHKERRPTPEDN 728
Query: 117 NGYDLNKIN 125
N N ++
Sbjct: 729 NNVSTNNLS 737
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,217,562
Number of Sequences: 59808
Number of extensions: 239225
Number of successful extensions: 391
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 39
length of query: 128
length of database: 16,821,457
effective HSP length: 74
effective length of query: 54
effective length of database: 12,395,665
effective search space: 669365910
effective search space used: 669365910
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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