Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000279-TA|BGIBMGA000279-PA|IPR000618|Insect cuticle
protein
(128 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 0.66
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 29 1.2
12_02_0779 + 23082577-23082903,23083347-23083543,23084346-230844... 29 1.5
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 29 1.5
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 27 3.5
01_06_1510 - 37859664-37861319 27 3.5
02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236 27 6.2
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 26 8.2
08_01_0043 - 300821-301111 26 8.2
06_03_0875 - 25584789-25585307,25585424-25585570,25585734-255858... 26 8.2
06_01_0061 + 527417-527856,527957-528017,528113-528685 26 8.2
03_05_0446 - 24414351-24414427,24414491-24414881 26 8.2
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 0.66
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 37 DTYVVPLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTG-DHKSQHESRDGDSVHG 95
DT + AT +E D+ PK ++ + T H+S HE+R G
Sbjct: 2639 DTVCQENVEAATEIEDGSLNRDQDDITSPKASQEDALEEVGTELPHESLHENRHGAKDEQ 2698
Query: 96 YYSLVQPD-GSVRKVEYTAD 114
SL++PD G+ K+ AD
Sbjct: 2699 TLSLIEPDTGNAEKLPNEAD 2718
>12_01_0818 +
7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 29 APSAHYAPDTYVV--PLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQHE 86
APS+ + D P + L GQY D++ +P+ + T + +
Sbjct: 598 APSSKFCSDIAQNSDPTQHALNILASDGQYVNQDDFVNPEKSVCMHDSKIETSREHADRK 657
Query: 87 SRDGDSVHGYYSLVQPDGS 105
D +++ Y SL PD S
Sbjct: 658 LDDSNNIQSYSSLPVPDPS 676
>12_02_0779 +
23082577-23082903,23083347-23083543,23084346-23084481,
23084558-23084794,23084885-23085108,23085434-23085551,
23086080-23086319,23086423-23086673,23088397-23088484,
23088576-23088727,23089670-23089811
Length = 703
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/41 (24%), Positives = 27/41 (65%)
Query: 80 DHKSQHESRDGDSVHGYYSLVQPDGSVRKVEYTADDHNGYD 120
++K +S+D +++G + + +GS+R+++ A++ +G D
Sbjct: 260 EYKKFLKSKDNQNINGGLANLAEEGSLRRIDSNAEESDGKD 300
>09_02_0203 -
5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 42 PLEQYATPLEYAGQYDGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQ 101
P +Q L G+Y D++ P+ + T + + D +++ Y SL
Sbjct: 568 PTQQALNSLASDGEYVNQDDFVDPEKSVCMHDSKIETSREYADRKLDDSNNIQSYSSLPV 627
Query: 102 PDGS 105
PD S
Sbjct: 628 PDPS 631
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 27.5 bits (58), Expect = 3.5
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 51 EYAGQYDGHDEYAHPKYD--FAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQPDGSVRK 108
E++G D D D +A S D G KSQ + RD D G P + +K
Sbjct: 143 EHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKK 202
Query: 109 --VEYTADDHNGYDLNKIN 125
V ++ + H + +N +N
Sbjct: 203 PRVVWSVELHQQF-VNAVN 220
>01_06_1510 - 37859664-37861319
Length = 551
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 48 TPLEYAGQYDGHDEYAHPKYDFAY--SVADP------HTGDHKSQHESRDGDSV 93
TP +Y G+ DG D HP+ + V DP + G K QH +G +
Sbjct: 65 TPFDYDGEVDGGDGDDHPREECGVFGVVGDPDATSLCYLGLQKLQHRGEEGAGI 118
>02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236
Length = 1096
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 67 YDFAYSVADPHTGDHKSQHESRDGDSVHGYYSLVQPDG--SVRKVEYTADDHNGYDLNKI 124
Y + + + TG + E R+ S+H Y + PD + +++++G ++N
Sbjct: 985 YSYGILLLEMFTGKRPTGTEFREALSLHNYVKMALPDNVIDIADQHLLSENNDGEEINSD 1044
Query: 125 NK 126
K
Sbjct: 1045 GK 1046
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 42 PLEQYATPLEYAGQYDGH----DEY-AHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGY 96
P + P+ Y D H +Y +P YDFA D G + S D Y
Sbjct: 355 PNKSLRDPVYYRCNTDPHHRIGSKYKVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQY 414
Query: 97 YSLVQPDGSVRKVE 110
Y ++Q D +R+VE
Sbjct: 415 YRILQ-DMGMRRVE 427
>08_01_0043 - 300821-301111
Length = 96
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 94 HGYYSLVQPDGSVRKVEYTADDHNGYDLNK 123
HGY+ +V PD +VR+ E D G+ K
Sbjct: 47 HGYFPMVSPD-TVRRDESAISDLAGHGFEK 75
>06_03_0875 -
25584789-25585307,25585424-25585570,25585734-25585897,
25586015-25586172,25586536-25586904,25586998-25587209,
25587439-25588059,25588561-25588699,25588968-25589044,
25589120-25589800,25590641-25590889
Length = 1111
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 91 DSVHGYYSLVQPDGSVRKVEYTADDHNG 118
D VHG +V P R +++ AD+ NG
Sbjct: 733 DRVHGGREMVAPQLEQRMIQHVADNLNG 760
>06_01_0061 + 527417-527856,527957-528017,528113-528685
Length = 357
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 3 AAKAGLYHGHGQAVS 17
++ AGL+HGHG AVS
Sbjct: 279 SSAAGLHHGHGGAVS 293
>03_05_0446 - 24414351-24414427,24414491-24414881
Length = 155
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 52 YAGQYDGHDE--YAHPKYDFAYSVADPHTG 79
Y G+YD HDE Y P D Y D G
Sbjct: 39 YGGRYDDHDEGNYRDPNDDCEYGDHDDDRG 68
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,669,827
Number of Sequences: 37544
Number of extensions: 212842
Number of successful extensions: 286
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 281
Number of HSP's gapped (non-prelim): 12
length of query: 128
length of database: 14,793,348
effective HSP length: 74
effective length of query: 54
effective length of database: 12,015,092
effective search space: 648814968
effective search space used: 648814968
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -