Silkworm BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000278-TA|BGIBMGA000278-PA|IPR000618|Insect cuticle
protein
         (163 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.61 
SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)          28   4.3  
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.7  
SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   10.0 

>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2250

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 90   DFAYSVADPHTGDHKSQHESRDGDSV--HGSYSLVQPDGSVRKVDYTAD 136
            D  +   +   GD   +H+  DGDSV  H  Y+    D  VR  DY  D
Sbjct: 1863 DVRHDEYNDEDGDSDVRHDDYDGDSVVRHDDYNDDNGDSDVRHDDYDGD 1911


>SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)
          Length = 846

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 84  YAHPKYDFAYSVADPHTGDHKSQHESRDGD-SVHGSYS 120
           Y    YD  Y+VA   +G +++ H +R  D SV G YS
Sbjct: 681 YTAQVYDAVYAVAHATSGLYRNGHVTRGNDWSVVGEYS 718


>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1913

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)

Query: 90   DFAYSVADPHTGDHK 104
            DFAY   DPHT  HK
Sbjct: 1425 DFAYVARDPHTSKHK 1439


>SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 356

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 91  FAYSVADPHTGDHKSQHESRDG--DSVHGSYSLVQPDGSVR 129
           F +     H GDH+S HE + G  D   G ++  +P+  +R
Sbjct: 97  FFFFAVSQH-GDHQSHHEEKRGLQDLAQGLHACARPEKLIR 136


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.131    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,103,555
Number of Sequences: 59808
Number of extensions: 133700
Number of successful extensions: 269
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 267
Number of HSP's gapped (non-prelim): 5
length of query: 163
length of database: 16,821,457
effective HSP length: 77
effective length of query: 86
effective length of database: 12,216,241
effective search space: 1050596726
effective search space used: 1050596726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)