Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000276-TA|BGIBMGA000276-PA|IPR000618|Insect cuticle
protein
(161 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0779 + 23082577-23082903,23083347-23083543,23084346-230844... 30 0.77
03_05_0701 - 26925252-26925578,26929233-26930513 29 1.3
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 1.8
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 29 2.4
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 2.4
01_01_0586 - 4353919-4353973,4354623-4354940,4355043-4355323 28 4.1
11_03_0010 - 8922361-8922375,8923888-8924610 27 7.2
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 27 7.2
08_02_0952 - 22981116-22981268,22981930-22981974,22982052-229821... 27 7.2
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 27 7.2
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 27 9.5
>12_02_0779 +
23082577-23082903,23083347-23083543,23084346-23084481,
23084558-23084794,23084885-23085108,23085434-23085551,
23086080-23086319,23086423-23086673,23088397-23088484,
23088576-23088727,23089670-23089811
Length = 703
Score = 30.3 bits (65), Expect = 0.77
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 102 DHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHG 140
++K +S+D +++G + + +GS+R++D A+E G
Sbjct: 260 EYKKFLKSKDNQNINGGLANLAEEGSLRRIDSNAEESDG 298
>03_05_0701 - 26925252-26925578,26929233-26930513
Length = 535
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 21/56 (37%)
Query: 101 GDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGFNAIVHNSAPSVHPIA 156
G K Q + GD+ HG + P S +H A +S PS H A
Sbjct: 9 GGRKGQRAADGGDAAHGRPAAAAPSSSSGGAQPPVTVNHASRAAAPSSPPSPHAAA 64
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 103 HKSQHESRDGDSVHGSYSLVQPD-GSVRKVDYTAD 136
H+S HE+R G + SL++PD G+ K+ AD
Sbjct: 2684 HESLHENRHGAKDEQTLSLIEPDTGNAEKLPNEAD 2718
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 90 DFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRK--VDYTADEHHGF-NAIVH 146
++A S D G KSQ + RD D G P + +K V ++ + H F NA+ H
Sbjct: 162 EYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNH 221
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 127 SVRKVDYTADEHHGFNAIVHNSAPS 151
SV K+D D+HHG A+ ++PS
Sbjct: 801 SVEKLDQDGDDHHGKEAVAAAASPS 825
>01_01_0586 - 4353919-4353973,4354623-4354940,4355043-4355323
Length = 217
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 DEHHGFNAIVHNSAPSVHPIAHHHH 160
D HH A + APS P HHHH
Sbjct: 52 DHHHPTTAAASSHAPSP-PTLHHHH 75
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 110 RDGDSVHGSYSLVQPDGSVRKVD 132
RDG V +YS P GS+R VD
Sbjct: 195 RDGSDVPAAYSTGCPAGSIRNVD 217
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 73 TPLAHYSGHHEYAHPKYDFAYSVADPHT 100
+P A GHH + HPK F S P T
Sbjct: 195 SPTAGDVGHHHHHHPKMGFYSSYHHPST 222
>08_02_0952 -
22981116-22981268,22981930-22981974,22982052-22982153,
22983262-22983468,22984783-22985042,22985338-22985442,
22986244-22986247,22986877-22986962,22987022-22987064
Length = 334
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/63 (22%), Positives = 24/63 (38%)
Query: 99 HTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGFNAIVHNSAPSVHPIAHH 158
HT DH++ + S + H L + + + + NS H + HH
Sbjct: 50 HTHDHQNHNHSHEHSHAHSLEDLSIGLSVLFGIVFFFIVEKIVRYVEDNSQKGAHGMGHH 109
Query: 159 HHY 161
HH+
Sbjct: 110 HHH 112
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 90 DFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDG 126
D Y D H+ + +HE+ +GDS SYS + DG
Sbjct: 443 DSEYDGLDEHSSE--GEHEALNGDSSGASYSSGEIDG 477
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 74 PLAHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHE 108
PL H+ HH + HP + + P DH H+
Sbjct: 272 PLPHFD-HHNHHHPIHGGRERGSSPAEADHHRHHQ 305
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.131 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,766,728
Number of Sequences: 37544
Number of extensions: 138525
Number of successful extensions: 392
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 384
Number of HSP's gapped (non-prelim): 15
length of query: 161
length of database: 14,793,348
effective HSP length: 77
effective length of query: 84
effective length of database: 11,902,460
effective search space: 999806640
effective search space used: 999806640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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