Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000276-TA|BGIBMGA000276-PA|IPR000618|Insect cuticle
protein
(161 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 41 5e-04
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 31 0.39
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 31 0.39
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 28 2.8
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTA 135
+H GHH AH + + V H G H + + + G HG++ P ++
Sbjct: 592 SHGHGHHAPAHHGHHGEHGV---HHGHHGAGYGAHHGH--HGAHHHHAPHHEHH--EHHG 644
Query: 136 DEHHGFNAIVHNSAPSVHPIAHHHHY 161
D HHG + + H + H +AHH H+
Sbjct: 645 DHHHGSHGVHHGHHGTHHSLAHHGHH 670
Score = 33.5 bits (73), Expect = 0.074
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 77 HYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYS 120
H+ HH AH + A+ H G H H+ ++ HG +S
Sbjct: 676 HHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHS 719
Score = 32.7 bits (71), Expect = 0.13
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTA 135
+H GHH AH + + A H G H H + HG + + +
Sbjct: 444 SHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHG----SHHS 499
Query: 136 DEHHGFNAIVHNSAPSVHPIAHH 158
HHG + H+ AP+ H HH
Sbjct: 500 PAHHGHHG-EHHHAPAHH--GHH 519
Score = 31.5 bits (68), Expect = 0.30
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 76 AHYSGHHEYA--HPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDY 133
AH+ H E+ H + +S A H G H H + HG +
Sbjct: 479 AHHGHHGEHGTHHGHHGSHHSPA--HHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAP 536
Query: 134 TADEHHGFNAIVHNSAPSVHPIAHHHHY 161
HHG + H S H AHH H+
Sbjct: 537 AHHGHHGEHGTHHGHHGSHHSPAHHGHH 564
Score = 31.1 bits (67), Expect = 0.39
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 77 HYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTAD 136
H G H + H + + V H G+H H S HG++ + +
Sbjct: 384 HKEGEH-HEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHH 442
Query: 137 EHHGFNAIVHNSAPSVHPIAHHH 159
E HG H+ A H HHH
Sbjct: 443 ESHGHGH--HSPAHHGHHGEHHH 463
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Query: 77 HYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTAD 136
H+ HH AH + + A H G H H S VH + G +
Sbjct: 551 HHGSHHSPAHHGHHGEHHHAPAHHG-HHGHHGSH---GVHHGHHESHGHGHHAPAHHGHH 606
Query: 137 EHHGFNAIVHNS---APSVHPIAHHHH 160
HG + H + A H AHHHH
Sbjct: 607 GEHGVHHGHHGAGYGAHHGHHGAHHHH 633
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 138 HHGFNAI-VHNSAPSVHPIAHHHHY 161
HHG + H + P H + HHHH+
Sbjct: 77 HHGHHTHHAHGAHPGHHEVHHHHHH 101
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 77 HYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTAD 136
H+ H E+ H + + H G H H G+ H +
Sbjct: 425 HHGHHGEHHHAPAHHGHHESHGH-GHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHG- 482
Query: 137 EHHGFNAIVHNSAPSVHPIAHHHHY 161
HHG + H S H AHH H+
Sbjct: 483 -HHGEHGTHHGHHGSHHSPAHHGHH 506
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSV-RKVDYT 134
AH+ HH+ HP + A H H+ Q + YS V P V ++ +
Sbjct: 68 AHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQ-------AAQPHYSAVVPRSDVIQQPPHF 119
Query: 135 ADEHHGFNAIVHNSAPSVHPIAHHHH 160
A HH N + AHHHH
Sbjct: 120 ALHHHLQNLVQQQQQQQ----AHHHH 141
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSV-RKVDYT 134
AH+ HH+ HP + A H H+ Q + YS V P V ++ +
Sbjct: 68 AHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQ-------AAQPHYSAVVPRSDVIQQPPHF 119
Query: 135 ADEHHGFNAIVHNSAPSVHPIAHHHH 160
A HH N + AHHHH
Sbjct: 120 ALHHHLQNLVQQQQQQQ----AHHHH 141
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSV-RKVDYT 134
AH+ HH+ HP + A H H+ Q + YS V P V ++ +
Sbjct: 101 AHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQ-------AAQPHYSAVVPRSDVIQQPPHF 152
Query: 135 ADEHHGFNAIVHNSAPSVHPIAHHHH 160
A HH N + AHHHH
Sbjct: 153 ALHHHLQNLVQQQQQQQ----AHHHH 174
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 76 AHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSV-RKVDYT 134
AH+ HH+ HP + A H H+ Q + YS V P V ++ +
Sbjct: 101 AHHQ-HHQQLHPSVQYQLVAAATHHNHHQPQ-------AAQPHYSAVVPRSDVIQQPPHF 152
Query: 135 ADEHHGFNAIVHNSAPSVHPIAHHHH 160
A HH N + AHHHH
Sbjct: 153 ALHHHLQNLVQQQQQQQ----AHHHH 174
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 78 YSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDG 126
Y+GHHE A+ + + H+SQH R + + SY +G
Sbjct: 473 YNGHHERANSYNPYP---ENSRNFSHQSQHSGRQAEQPYNSYDQFLTNG 518
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 84 YAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGFN 142
+A PK D + + + HK H+S S S ++V DG + + +++ G+N
Sbjct: 55 FAMPKLDASKAAMVHSSSSHKGHHQSSGSSSNTHSLTVVGADG--KNITENSEKKDGYN 111
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.131 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,125,556
Number of Sequences: 27539
Number of extensions: 111855
Number of successful extensions: 309
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 288
Number of HSP's gapped (non-prelim): 16
length of query: 161
length of database: 12,573,161
effective HSP length: 76
effective length of query: 85
effective length of database: 10,480,197
effective search space: 890816745
effective search space used: 890816745
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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