Silkworm BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000275-TA|BGIBMGA000275-PA|IPR000618|Insect cuticle
protein
         (179 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.72 
SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)          28   5.1  
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.7  
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)     27   6.7  

>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2250

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 107  DFAYSVADPHTGDHKSQHESRDGDSV--HGSYSLVQPDGSVRKVDYTAD 153
            D  +   +   GD   +H+  DGDSV  H  Y+    D  VR  DY  D
Sbjct: 1863 DVRHDEYNDEDGDSDVRHDDYDGDSVVRHDDYNDDNGDSDVRHDDYDGD 1911


>SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)
          Length = 846

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 101 YAHPKYDFAYSVADPHTGDHKSQHESRDGD-SVHGSYS 137
           Y    YD  Y+VA   +G +++ H +R  D SV G YS
Sbjct: 681 YTAQVYDAVYAVAHATSGLYRNGHVTRGNDWSVVGEYS 718


>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1913

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)

Query: 107  DFAYSVADPHTGDHK 121
            DFAY   DPHT  HK
Sbjct: 1425 DFAYVARDPHTSKHK 1439


>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
          Length = 1021

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 92  LGHYSGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYT 151
           +GH  G  +  H K +  +   D   G    +HE  +GD  HG  ++   +G +++   +
Sbjct: 331 MGHEKG--DMQHGKKNMGHEKGDMQHGKKNMEHE--EGDMQHGKKNMGHEEGDMQQGKKS 386

Query: 152 ADEHHG 157
            +   G
Sbjct: 387 MEHEKG 392


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.317    0.133    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,147,243
Number of Sequences: 59808
Number of extensions: 131819
Number of successful extensions: 323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 321
Number of HSP's gapped (non-prelim): 5
length of query: 179
length of database: 16,821,457
effective HSP length: 78
effective length of query: 101
effective length of database: 12,156,433
effective search space: 1227799733
effective search space used: 1227799733
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)