GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000274-TA|BGIBMGA000274-PA|undefined
         (380 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 157 EKSHPDPPCHEVKNEQL 173
           EK  PDPP + V NE +
Sbjct: 264 EKCRPDPPQNLVINESI 280


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 106 NKEDAAGYEYSYLVYDENTGDHKTQHELSDGFNAVVKKFLPVNVEKKIEQHEKSHPDPPC 165
           N++  +  + S  V D +T D  T  E ++G +  V   +   +EK  +   + +   P 
Sbjct: 693 NEKSPSPQQRSPSVTDLSTKDGTTVPESNNGSSPSVLNAIEKLIEKSFDSRSRQNSSFPG 752

Query: 166 H 166
           H
Sbjct: 753 H 753


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.130    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,240
Number of Sequences: 317
Number of extensions: 2141
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 380
length of database: 114,650
effective HSP length: 58
effective length of query: 322
effective length of database: 96,264
effective search space: 30997008
effective search space used: 30997008
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)