GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000274-TA|BGIBMGA000274-PA|undefined
         (380 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast muta...    32   3.9  

>D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast mutant
           protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 60  SAAPVGSVVPNLVAPCGTPCIYPGQSIAP 88
           S++  G    +  +PC TPC  PG S+AP
Sbjct: 148 SSSASGWATASSTSPCSTPCSMPGTSVAP 176


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.313    0.130    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,704,272
Number of Sequences: 224733
Number of extensions: 1327801
Number of successful extensions: 2271
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2270
Number of HSP's gapped (non-prelim): 1
length of query: 380
length of database: 73,234,838
effective HSP length: 91
effective length of query: 289
effective length of database: 52,784,135
effective search space: 15254615015
effective search space used: 15254615015
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)