Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000274-TA|BGIBMGA000274-PA|undefined
(380 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-2|CAB01524.2| 257|Caenorhabditis elegans Hypothetical pr... 32 0.58
Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical pr... 30 3.1
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF016417-5|AAB65278.2| 108|Caenorhabditis elegans Hypothetical ... 29 5.4
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 29 5.4
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 29 5.4
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 9.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 9.5
>Z78066-2|CAB01524.2| 257|Caenorhabditis elegans Hypothetical
protein W06A7.4 protein.
Length = 257
Score = 32.3 bits (70), Expect = 0.58
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 4 NIFVAVFILGVSAINVVTGASFSKVFVQGGREVVPVE-YLQYGAPSIAVAGSQLAQ-ISA 61
++ +A+F+L S+I+ +TG + S+ + G VP+ L Y + + GS + I
Sbjct: 3 HVGMAMFMLFASSISCLTGWAISRFGLFGVPSAVPMSILLNYNGIILLIVGSSIYPFIKV 62
Query: 62 APVGSVVPNLVAP 74
VGSV + V P
Sbjct: 63 NVVGSVASDTVLP 75
>Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical
protein R09E10.2 protein.
Length = 198
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 123 NTGDHKTQHELSDGFNAVVKKFLPVNVEKKIEQHEKSHP 161
NT H T +L DGF ++ FL V V + S P
Sbjct: 5 NTQMHITSSQLEDGFPSITNNFLTVTVNFNYDPSNPSEP 43
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 151 KKIEQHEK-SHPDPPCHEVKNEQLKVETKTEHS 182
KKIE+ K +H +P E KNE+ ETK E S
Sbjct: 614 KKIEKTNKVNHDEPKKEEKKNEEQVKETKLESS 646
>AF016417-5|AAB65278.2| 108|Caenorhabditis elegans Hypothetical
protein F17A9.1 protein.
Length = 108
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 113 YEYSYLVYDENTGDHKTQHELSDGFNAVVKKFLPVNVEKKIEQH 156
YE+ +L Y G+H H+ S ++ +P++V I +H
Sbjct: 45 YEFDFLFYQFKNGNHDLYHDRSKDPKQLMLSEMPIDVMPDILKH 88
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 18 NVVTGASFSKVFVQGGREVVPVEYLQYGAPSIAVAGSQLAQISAAPVGSVVPNLVAPCGT 77
N++ G K V + +V VE L +GAP AV + A + APV V+P AP T
Sbjct: 152 NLMKGKCGKKRKVHKFKPIV-VEELDFGAPKPAVPATPKAPV--APVAPVIP---APAVT 205
Query: 78 P 78
P
Sbjct: 206 P 206
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 18 NVVTGASFSKVFVQGGREVVPVEYLQYGAPSIAVAGSQLAQISAAPVGSVVPNLVAPCGT 77
N++ G K V + +V VE L +GAP AV + A + APV V+P AP T
Sbjct: 152 NLMKGKCGKKRKVHKFKPIV-VEELDFGAPKPAVPATPKAPV--APVAPVIP---APAVT 205
Query: 78 P 78
P
Sbjct: 206 P 206
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 9.5
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 48 SIAVAGSQLAQISAAPVGSVVPNLVAPC--GTPCIYPGQSIAPATTNXXXXXXXXXXXXX 105
S ++ + +++ AP GSVV AP G P PG IAP+
Sbjct: 1789 STSIVTVKAEKLNLAPTGSVVTTRAAPVPPGVPGA-PGAPIAPSEEKTKEELASFCSKKC 1847
Query: 106 NKEDAAGYEYSYLVYDENTGDHKTQHELSDGFNAVVKKFLPVNVEKKIEQHEKSHPDP 163
E A+ + L +E QH + +N +K+ L N+ K + Q +K PDP
Sbjct: 1848 YYELASATR-APLTEEEVAA--AEQHVSEEVYNK-LKQVLTENIVKAVSQGKK--PDP 1899
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 9.5
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 48 SIAVAGSQLAQISAAPVGSVVPNLVAPC--GTPCIYPGQSIAPATTNXXXXXXXXXXXXX 105
S ++ + +++ AP GSVV AP G P PG IAP+
Sbjct: 1789 STSIVTVKAEKLNLAPTGSVVTTRAAPVPPGVPGA-PGAPIAPSEEKTKEELASFCSKKC 1847
Query: 106 NKEDAAGYEYSYLVYDENTGDHKTQHELSDGFNAVVKKFLPVNVEKKIEQHEKSHPDP 163
E A+ + L +E QH + +N +K+ L N+ K + Q +K PDP
Sbjct: 1848 YYELASATR-APLTEEEVAA--AEQHVSEEVYNK-LKQVLTENIVKAVSQGKK--PDP 1899
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 146 PVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKT 179
P+ EK+ E+ + SHP+ P K + +V ++T
Sbjct: 2798 PIEHEKETEEFDHSHPESPVLSEKEREHQVTSET 2831
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.130 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,174,815
Number of Sequences: 27539
Number of extensions: 229561
Number of successful extensions: 461
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 456
Number of HSP's gapped (non-prelim): 11
length of query: 380
length of database: 12,573,161
effective HSP length: 83
effective length of query: 297
effective length of database: 10,287,424
effective search space: 3055364928
effective search space used: 3055364928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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