Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000272-TA|BGIBMGA000272-PA|IPR000618|Insect cuticle
protein, IPR000583|Glutamine amidotransferase, class-II
(297 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0905 + 25843547-25844314 38 0.013
02_01_0302 - 2021221-2023305 33 0.36
07_01_0373 + 2783596-2784933 32 0.48
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 32 0.64
10_08_0989 + 22069244-22071679 30 1.9
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 29 3.4
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 29 3.4
09_06_0002 + 20121846-20123308,20123420-20123426 29 4.5
04_04_0512 + 25806599-25808080 29 4.5
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 4.5
10_01_0270 - 2876907-2877547,2877838-2878012 29 5.9
09_01_0025 - 441528-444284 28 7.8
07_01_0250 - 1864990-1865005,1865429-1865502,1865588-1865659,186... 28 7.8
>06_03_0905 + 25843547-25844314
Length = 255
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 220 PVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVH-TASLFHATPLV 276
PV PV + TP V + P++ PV + P V + P+V PV + T + + TP V
Sbjct: 94 PVTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPV 151
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 217 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLV 258
+ P + + PVV PV + P + + PVV PV + P V
Sbjct: 103 YPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPV 144
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 226 PVVHST--PVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHATPLVH 277
PV H PV P+ + P V + PVV P+ + P V T + P+ +
Sbjct: 86 PVTHPPKGPVTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTY 139
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 216 IHSAPVLHSAPVVHSTPVVHSAPLIHSAPVVH-SAPVVHSAPLV 258
+ + PV+ PV + TP V + P++ PV + + PV + P V
Sbjct: 108 VTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPV 151
>02_01_0302 - 2021221-2023305
Length = 694
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHATP 274
H +P +TP S P + P HS P H+ P S P TA H+ P
Sbjct: 483 HPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPP 534
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 218 SAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGP 262
+ P S P +TP HS P H+ P S P +AP HS P
Sbjct: 490 TTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPP 534
>07_01_0373 + 2783596-2784933
Length = 445
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 43 ATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVH 102
ATA Y + AAP H P AG H + + H+ + +P + + +P+ AP H
Sbjct: 256 ATADYIGFAAAAAP---HTQPRKSAAG---HHSAMPHT-FASPAPHLANITPIAMAPAQH 308
Query: 103 HAAIPIAVEH 112
P A EH
Sbjct: 309 FTLTPAAAEH 318
>01_06_0102 - 26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 219 APVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGP 262
AP+ P+V TP+V P+ +AP AP P
Sbjct: 1141 APMAQDTPMVQGTPMVQGTPMAEGTTGAQAAPTAQGAPAQTQNP 1184
>10_08_0989 + 22069244-22071679
Length = 811
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 96 QHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYS 155
+ P+V +P V + + E AP +Y+ + DP + ++ + D V+ Y
Sbjct: 34 EEPPLVEPHPVPTPVVEATNEEQDAPPEYDADHLQYDPGLRSPIASYDVNEQDAVRRAYI 93
Query: 156 LLQPD 160
L P+
Sbjct: 94 LKGPN 98
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 54 AAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAA 105
AA + H P+I+ A P AA + +H PV++ +P A AA
Sbjct: 9 AAAIAPHLVPVIRGATPFAPAAATAAAISLHLVPVIRGATPFSSAVAAAAAA 60
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 49 PVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAP 99
P ++ AAP AAP A AAPVE +S A SP + P
Sbjct: 353 PAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSPYTNYP 403
>09_06_0002 + 20121846-20123308,20123420-20123426
Length = 489
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 24 HGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYI 83
H H VSS ++ + P AHY +L A + + QH V +P++ SS
Sbjct: 185 HHHKVSS-AVTKEPLPIACGVAHYLVLLGRAMTI----KGMDQHIEDRVCLSPLQQSSLA 239
Query: 84 HASP 87
H SP
Sbjct: 240 HPSP 243
>04_04_0512 + 25806599-25808080
Length = 493
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 106 IPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKG 152
+P V +S+ + +HA ++ P GD +++H++ + + G
Sbjct: 392 LPEYVSNSEELSNHATFNHKVEEDSSSPAAGDRENEHDSSNSATIDG 438
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/92 (23%), Positives = 30/92 (32%)
Query: 21 DEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHS 80
DE H + R PS TP L + Q AGP ++ A
Sbjct: 309 DEVKSHLQKYRLHTRRPMPSPAPPTAATPQLVVLGGIWVPPEYATQAAGPAIYGAHPATQ 368
Query: 81 SYIHASPVVQHFSPVQHAPVVHHAAIPIAVEH 112
+ A+ Q + H + HH A V H
Sbjct: 369 PHYTAAVAAQEYYHHHHHHLQHHPAAAALVHH 400
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 52 SHAAPVLTHAAP-LIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAV 110
S AP H P H P V++ P +Y H +PV + P P+ H A V
Sbjct: 174 SPPAPAAYHKPPPSYTHPAPPVYSYPTP--AYSHPTPVYKQPLPTPSPPIYHPPAEEKKV 231
Query: 111 EHSDHVE 117
D E
Sbjct: 232 AMQDDAE 238
>09_01_0025 - 441528-444284
Length = 918
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 217 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHATPLV 276
H+A L A +HST SA + +H +H S P H+ S ATPLV
Sbjct: 164 HNADHLSYA-TLHSTAAPLSAVQTLTHGFMHPGHRIHHLAATSSCPPPHSHSPAAATPLV 222
Query: 277 H 277
H
Sbjct: 223 H 223
>07_01_0250 -
1864990-1865005,1865429-1865502,1865588-1865659,
1865854-1865920,1866365-1866429,1866812-1866843,
1867250-1867326,1867445-1867646,1867733-1867859
Length = 243
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 221 VLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVV 264
VLH A V T VV + ++HS V+ VV S +V GP V
Sbjct: 60 VLHRAASVDPTAVVEAGAVVHSGAVLGKDVVVGSGAVV--GPSV 101
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.130 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,974,333
Number of Sequences: 37544
Number of extensions: 407952
Number of successful extensions: 993
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 35
length of query: 297
length of database: 14,793,348
effective HSP length: 82
effective length of query: 215
effective length of database: 11,714,740
effective search space: 2518669100
effective search space used: 2518669100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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