Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000272-TA|BGIBMGA000272-PA|IPR000618|Insect cuticle
protein, IPR000583|Glutamine amidotransferase, class-II
(297 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.005
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 38 0.011
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 36 0.046
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 34 0.14
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 31 0.99
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 2.3
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 29 4.0
Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 7.0
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 7.0
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 9.2
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 9.2
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 9.2
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 9.2
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 9.2
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 9.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 9.2
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 9.2
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 9.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 9.2
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 9.2
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 28 9.2
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 28 9.2
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 9.2
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 9.2
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.005
Identities = 32/121 (26%), Positives = 37/121 (30%), Gaps = 7/121 (5%)
Query: 22 EGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSS 81
E HGH S + H H A AH+ H H AP H H H
Sbjct: 443 ESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEH------HHAPA-HHGHHGEHGTHHGHHG 495
Query: 82 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 141
H+ H HAP H H H E H + + H G H S
Sbjct: 496 SHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSH 555
Query: 142 H 142
H
Sbjct: 556 H 556
Score = 32.7 bits (71), Expect = 0.32
Identities = 29/119 (24%), Positives = 38/119 (31%), Gaps = 9/119 (7%)
Query: 24 HGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYI 83
HGH H + H+ SH +P H H P H EH ++
Sbjct: 468 HGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPA-HHGHHGEHHHAPAHHGHHGEHGTH- 525
Query: 84 HASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 142
H H +P H HH H H H+PA + + E H H H
Sbjct: 526 HGHHGEHHHAPAHHG---HHGEH--GTHHGHHGSHHSPAHH--GHHGEHHHAPAHHGHH 577
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 37.5 bits (83), Expect = 0.011
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 15/147 (10%)
Query: 36 HDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPV 95
HD + P + + + +H G V + S+ H+S +H
Sbjct: 662 HDHHDRSSPVASEPAARSPSVQSSRTSEHFEHRGEVPQSPS---SNQFHSS---EHIEEA 715
Query: 96 QHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSVEDPHTGDHKSQH-ETRD 146
+ +PV + ++ P A EH +H E H+PA + EF S SV PH +H H E +
Sbjct: 716 RQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSVHSPHVSEHFEHHEEAQH 775
Query: 147 GDVVKGEYSLLQPDGSIRKVEYTADHH 173
V E + P +HH
Sbjct: 776 SPVASQEEAARSPSVHSSHASEHFEHH 802
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 22 EGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVH--AAPVE- 78
E G S S + H A +PV + + HA+ +H V H AA E
Sbjct: 692 EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEE 751
Query: 79 --HSSYIHASPVVQHF---SPVQHAPVV-HHAAIPIAVEHSDHVEDH 119
S +H+ V +HF QH+PV A HS H +H
Sbjct: 752 FGRSPSVHSPHVSEHFEHHEEAQHSPVASQEEAARSPSVHSSHASEH 798
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 28 VSSQSIVRHDEP-SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHAS 86
V S++ H E S A+ H L + + + PV + P S + +S
Sbjct: 627 VQSENFEHHAEVHSFHASEHIDEALPSPVQSVHSSHDHHDRSSPVA-SEPAARSPSVQSS 685
Query: 87 PVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHE 143
+HF +H V + S+H+E+ + SV PH +H E
Sbjct: 686 RTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEHFEHRE 739
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 34 VRHDEPSHQATAHYTPVLS-HAAPVLTHAAPLIQHAGPVVHAAPV-EH-SSYIHASPVVQ 90
V D +H +PV S H++ H Q P VH++ EH SPV
Sbjct: 556 VHTDHKAHSEDVPQSPVQSVHSSHASEHIDEAPQSPVPSVHSSHASEHIEQEALPSPVAS 615
Query: 91 HFS-PVQHAPVV------HHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPH 134
P +P+V HHA + + S+H+++ P+ + +S D H
Sbjct: 616 ERDVPSAESPLVQSENFEHHAEVH-SFHASEHIDEALPSPVQSVHSSHDHH 665
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.5 bits (78), Expect = 0.046
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 27 AVSSQSIVRHDEPSHQATAHYTPVLSHAAPVL---THAAPLIQHAGPVVHAAPVEHSSYI 83
A + Q V P Q PV A P A P++Q A PV A+P + +
Sbjct: 179 APTQQPPVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPV 238
Query: 84 HASPVVQHFSP--VQHAPVVHHAAIP 107
PVVQ VQ APVV A P
Sbjct: 239 QQQPVVQAPPKPIVQQAPVVQQAPPP 264
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 30 SQSIVRHDEPSHQATAHYTPVLSHAAPVL-THAAPLIQHAGPVVHAAPVEHSSYIHASPV 88
+Q +V+ P QA+ PV+ P++Q A PVV AP A PV
Sbjct: 216 AQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQA-PVVQQAPPPKQQQAQAQPV 274
Query: 89 VQHFSPVQHAPVVHHAAIPI 108
Q P APVV A+ P+
Sbjct: 275 QQ---PPNPAPVVQQASAPV 291
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 77 VEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 122
VE SSYIH+S +QH H P + ++H H P+
Sbjct: 87 VESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 27 AVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHA--GPVVHAAPVEHSSYIH 84
A +Q + + SH T P S+ AP A + QH+ G + A P S + H
Sbjct: 1232 APGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASSHHEH 1291
Query: 85 ASPVVQHFSPVQHAPVVHHA 104
+ F+P AP HA
Sbjct: 1292 IAAPQARFTPTPGAPSPWHA 1311
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 39 PSHQATAHYTPVLSHA-APVLTHAAPLIQHAGPVVHAAPVEHS 80
P HQ H+ P L HA PV H P H+ + H H+
Sbjct: 770 PHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHT 812
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 30.3 bits (65), Expect = 1.7
Identities = 49/219 (22%), Positives = 75/219 (34%), Gaps = 10/219 (4%)
Query: 61 AAPLIQHAGPVVHAAPVEHSSYIHASPVVQ--HFSPVQHAPVVHHAAIPIAVEHSDHVED 118
AAP + A H + VE ++ V++ H S + AP H + A D E
Sbjct: 313 AAP-DESAPEAAHDSHVEETAAQVVDEVIEAVHVSANESAPEEHKEEVAAAATSEDQKEP 371
Query: 119 HAPAKYEFSYSVEDPHTGDHKSQHE--TRDGDVVKGEYSLLQPDGSIRKVEYTA-DHHNG 175
APA E ++ E G +S H T V E + G++ + + D +G
Sbjct: 372 -APASDE--HTSESAVEGAIESVHIALTESAPVASDENTTEAAPGTVEEHKNEVHDPVDG 428
Query: 176 FSAIVHNSEPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHSAPVLHSAPVVHS-TPVV 234
S+ + +H + SA H+ PVV
Sbjct: 429 ASSDAPAEDHREAAASSESVEEPITAVHVEATESAAPADKVHEETKIDSAAETHADAPVV 488
Query: 235 HSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHAT 273
++P A V AP V SA + H + AT
Sbjct: 489 DASPAEDQASEVTEAPHVESAKSAPATSEDHKEDVAQAT 527
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 218 SAPVLHSAPVVHSTPVV---HSAPLIHSAPV-VHSAPVVHSAPLVHSGPVVHTASLFHAT 273
S P+LH V P V HS + S PV +H P V S PL HS P + S +
Sbjct: 131 SVPLLHDRYFVPPPPPVPPRHSR-VQQSPPVPIHPTPPVSSTPLRHSAPSFASDSQQFLS 189
Query: 274 PL 275
P+
Sbjct: 190 PI 191
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 218 SAPVLHSAPVVHSTPVV---HSAPLIHSAPV-VHSAPVVHSAPLVHSGPVVHTASLFHAT 273
S P+LH V P V HS + S PV +H P V S PL HS P + S +
Sbjct: 131 SVPLLHDRYFVPPPPPVPPRHSR-VQQSPPVPIHPTPPVSSTPLRHSAPSFASDSQQFLS 189
Query: 274 PL 275
P+
Sbjct: 190 PI 191
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 217 HSAPVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHATPLV 276
H + AP + PV A IH+ + AP +H APL + V TA + T +V
Sbjct: 363 HITQEIQPAPQPYVAPVAPVAQEIHTIQPIQPAP-IHPAPLQPAHVVQETAHVAPETKVV 421
>Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical
protein T04F3.3 protein.
Length = 562
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 76 PVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFS 127
P E I SP+ Q S V H +H + DH H P EFS
Sbjct: 367 PFEQGMEIEYSPITQLVSSVAHLVEMHQKS---KEREEDHQNSHGPMFPEFS 415
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 73 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 131
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 322 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTGVG 381
Query: 132 DPHTGDHKSQHET-RDGDVVKGEYSLL 157
+ SQH DG ++G ++ +
Sbjct: 382 SDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 73 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 131
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 132 DPHTGDHKSQHET-RDGDVVKGEYSLL 157
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 73 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 131
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 132 DPHTGDHKSQHET-RDGDVVKGEYSLL 157
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 73 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 131
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 132 DPHTGDHKSQHET-RDGDVVKGEYSLL 157
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 73 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 131
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 132 DPHTGDHKSQHET-RDGDVVKGEYSLL 157
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 104 AAIPIAVEHS-DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDG- 161
A I I E++ D P ++ ED G Q + RD D + YS + +G
Sbjct: 731 AMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGR 790
Query: 162 SIRKVE-YTADHHNGFSAIVH 181
S +K+ ++ D H G + H
Sbjct: 791 STQKMNLFSIDEHTGLVKLRH 811
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 104 AAIPIAVEHS-DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDG- 161
A I I E++ D P ++ ED G Q + RD D + YS + +G
Sbjct: 731 AMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGR 790
Query: 162 SIRKVE-YTADHHNGFSAIVH 181
S +K+ ++ D H G + H
Sbjct: 791 STQKMNLFSIDEHTGLVKLRH 811
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 49 PVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 108
P + APVL APL+ P V AAP + +PV +PV P +A P+
Sbjct: 101 PFFASPAPVLAAPAPLLAPPAP-VFAAPRPVFAAPALAPVAP-MAPVLRGPAFAYAPSPV 158
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 629 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 677
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 739 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 787
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1643 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1691
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1643 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1691
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1643 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1691
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1649 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1697
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1649 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1697
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1643 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1691
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1649 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1697
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 1649 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 1697
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 746 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 794
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 223 HSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVH---SGPVVHTASL 269
+SAPV HS PV + APV VV + VH GPVV ++
Sbjct: 819 YSAPVHHS-PVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTI 867
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 104 AAIPIAVEHS-DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDG- 161
A I I E++ D P ++ ED G Q + RD D + YS + +G
Sbjct: 731 AMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGR 790
Query: 162 SIRKVE-YTADHHNGFSAIVH 181
S +K+ ++ D H G + H
Sbjct: 791 STQKMNLFSIDEHTGLVKLRH 811
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 104 AAIPIAVEHS-DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDG- 161
A I I E++ D P ++ ED G Q + RD D + YS + +G
Sbjct: 731 AMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGR 790
Query: 162 SIRKVE-YTADHHNGFSAIVH 181
S +K+ ++ D H G + H
Sbjct: 791 STQKMNLFSIDEHTGLVKLRH 811
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.130 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,204,174
Number of Sequences: 27539
Number of extensions: 318173
Number of successful extensions: 874
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 791
Number of HSP's gapped (non-prelim): 126
length of query: 297
length of database: 12,573,161
effective HSP length: 81
effective length of query: 216
effective length of database: 10,342,502
effective search space: 2233980432
effective search space used: 2233980432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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