Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000272-TA|BGIBMGA000272-PA|IPR000618|Insect cuticle
protein, IPR000583|Glutamine amidotransferase, class-II
(297 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 39 0.004
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 35 0.057
At5g27690.1 68418.m03321 heavy-metal-associated domain-containin... 33 0.17
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 33 0.23
At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin; g... 31 1.2
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 31 1.2
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 2.1
At5g41100.2 68418.m04997 expressed protein 29 3.7
At5g41100.1 68418.m04996 expressed protein 29 3.7
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ... 29 3.7
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ... 29 3.7
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 4.9
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 29 4.9
At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putati... 28 6.5
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 28 6.5
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 28 6.5
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 28 8.6
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 28 8.6
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 48 TPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSS--YIHASPVVQHFSPV 95
+P +SH+ P + H++P + H+ P PV HSS +SP V H SPV
Sbjct: 155 SPAVSHSPPPVRHSSPPVSHSSP-----PVSHSSPPTSRSSPAVSHSSPV 199
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 34 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHA-APVEH-SSYIHASPVVQH 91
VRH P +H +P +SH++P + ++P + H+ PVV A +PV+ SS +SP
Sbjct: 165 VRHSSPP---VSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSSTASSPRAAS 221
Query: 92 FSP 94
SP
Sbjct: 222 PSP 224
>At1g21310.1 68414.m02662 proline-rich extensin-like family
protein contains extensin-like region, Pfam:PF04554
Length = 431
Score = 35.1 bits (77), Expect = 0.057
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 42 QATAHYTPVLSHAAPVLTHAAPLIQHAGP--VVHAAPV--EHSSYIHASPVVQHFS--PV 95
Q+TA+Y S P + H P ++H P V H+ P +H Y P V+H+S PV
Sbjct: 24 QSTANY--FYSSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPV 81
Query: 96 QHAP 99
H+P
Sbjct: 82 YHSP 85
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 75 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 134
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 135 PPVYHSP 141
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 103 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 162
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 163 PPVYHSP 169
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 131 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 190
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 191 PPVYHSP 197
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 159 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 218
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 219 PPVYHSP 225
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 187 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 246
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 247 PPVYHSP 253
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 215 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 274
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 275 PPVYHSP 281
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 243 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 302
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 303 PPVYHSP 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 271 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 330
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 331 PPVYHSP 337
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 299 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 358
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 359 PPVYHSP 365
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS- 93
HY+P + H+ P V P ++H P V H+ P Y++ SP V+H+S
Sbjct: 327 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 386
Query: 94 -PVQHAP 99
PV H+P
Sbjct: 387 PPVYHSP 393
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 46 HYTPV-LSHAAP------VLTHAAPLIQHAGP--VVHAAPVEHSSYIHAS---PVVQHFS 93
HY+P + H+ P V P ++H P V H+ P Y++ S P V H+S
Sbjct: 355 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKEKYVYKSPPPPPVHHYS 414
Query: 94 PVQHAPVVHHAAIP 107
P H P ++ + P
Sbjct: 415 PPHH-PYLYKSPPP 427
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query: 63 PLIQHAGP--VVHAAPVEHSSYIHASPV--VQHFS--PVQHAP 99
P ++H P V H+ P Y++ SP V+H+S PV H+P
Sbjct: 71 PPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSP 113
>At5g27690.1 68418.m03321 heavy-metal-associated domain-containing
protein very low similarity to copper homeostasis factor
from Arabidopsis thaliana [gi:3168840]; contains Pfam
heavy metal associated domain PF00403
Length = 352
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 216 IHSAPVLHSAPVVHSTP--VVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHAT 273
I+SAP H ++H P + H H P VHS P H + GP + S +H
Sbjct: 214 IYSAPQDHH--IIHGPPPHLHHHQQQNHPYPTVHSPPRHHPQQMYGPGPGLPPPSFYHTQ 271
Query: 274 P 274
P
Sbjct: 272 P 272
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 227 VVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVVHTASLFHATPL 275
++H +PV+ P APV S P+V S+P H P H + + PL
Sbjct: 216 LIHRSPVLSVLP---PAPVYSSNPMVRSSPPGHPSPSAHLEEMSNRPPL 261
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 216 IHSAPVLH---SAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGPVV 264
IH +PVL APV S P+V S+P H +P H + + PL H P V
Sbjct: 217 IHRSPVLSVLPPAPVYSSNPMVRSSPPGHPSPSAHLEEMSNRPPL-HPQPRV 267
>At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin;
glycine-rich protein 18 (GRP18) PMID:11431566;
Length = 228
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 219 APVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAP 256
AP +AP + P +AP +AP +AP +AP
Sbjct: 181 APAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAP 218
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 225 APVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGP 262
AP + P +AP +AP +AP +AP + P
Sbjct: 181 APAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAP 218
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 224 SAPVVHSTPVV-HSAPLIHSAPVVHSAPVVHSAPLVHSGPVV 264
S PVV PVV P+I PVV+ P+V P+ P++
Sbjct: 88 SPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPITRP-PII 128
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 218 SAPVLHSAP-VVHSTPVVHSAPLIHSAPVVHSAPV 251
S PV+ P VV P++ P+++ P+V P+
Sbjct: 88 SPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPI 122
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 59 THAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIP 107
T P H+ P +P Y ++SP H SP H+P H+ P
Sbjct: 535 TRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPP 583
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 220 PVLHSAPVVHSTPVVHSAPLIHSAPVVHSAPVVHSAPLVHSGP 262
P HS P +P S P HS+P HS P HS P
Sbjct: 540 PPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPP 582
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 34 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFS 93
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 94 ----PVQHA------PVVHHAAIPIAVE 111
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 34 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFS 93
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 94 ----PVQHA------PVVHHAAIPIAVE 111
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 578
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 17 GGVIDEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAP-VLTHAAPLIQHAGPVVHAA 75
GG D H H+ + S+ PS T + S A P V T P Q G ++H
Sbjct: 32 GGSSDVEHSHSNQASSMAAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILH-V 90
Query: 76 PVEH 79
P+ H
Sbjct: 91 PIRH 94
>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 571
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 17 GGVIDEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAP-VLTHAAPLIQHAGPVVHAA 75
GG D H H+ + S+ PS T + S A P V T P Q G ++H
Sbjct: 32 GGSSDVEHSHSNQASSMAAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILH-V 90
Query: 76 PVEH 79
P+ H
Sbjct: 91 PIRH 94
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 49 PVLSHAAPVLTHAAPLIQHAGP---VVHAAPVEHSSYIH----ASPVVQHFSPVQHAPVV 101
P H+ P +H P I+++ P VH P S H SP V +++ P V
Sbjct: 739 PTPIHSPPPQSHP-PCIEYSPPPPPTVHYNPPPPPSPAHYSPPPSPPVYYYNSPPPPPAV 797
Query: 102 HHAAIPIAVEHSDHVEDHAPAKYE 125
H++ P V H H + P YE
Sbjct: 798 HYSPPPPPVIH--HSQPPPPPIYE 819
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Query: 39 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAP-VEHSSYIHASPVVQHFSPVQH 97
P+ + PV S A H + + P ++ P +HSSY H S
Sbjct: 61 PNPNPPQYTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 120
Query: 98 APVVHHAAIPIAVEHSDHVEDHAPA 122
AP +++PI+ + + PA
Sbjct: 121 APASSSSSLPISGQQRGGMAIGVPA 145
>At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putative
similar to GI:6688808 [Medicago sativa subsp. x varia],
caffeic acid O-methyltransferase (homt1), Populus
kitakamiensis, EMBL:PKHOMT1A
Length = 359
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 51 LSHAAPVLTHAAPLIQHAGPVVHAAPVE 78
LS+AA VL H + A P+VH A VE
Sbjct: 115 LSYAAYVLQHHQEALMRAWPLVHTAVVE 142
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 46 HYTP--VLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSS----YIHASPVVQHFSPVQHAP 99
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 100 VVHH 103
+HH
Sbjct: 165 TLHH 168
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 46 HYTP--VLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSS----YIHASPVVQHFSPVQHAP 99
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 100 VVHH 103
+HH
Sbjct: 165 TLHH 168
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 39 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHA--APVEHSSYIHASPVVQHFSPVQ 96
P +T + PVL + + + PL P++ A P H I + H
Sbjct: 310 PPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHH---H 366
Query: 97 HAPVVHHAAIP 107
P VH +AIP
Sbjct: 367 LPPPVHQSAIP 377
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 39 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHA--APVEHSSYIHASPVVQHFSPVQ 96
P +T + PVL + + + PL P++ A P H I + H
Sbjct: 310 PPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHH---H 366
Query: 97 HAPVVHHAAIP 107
P VH +AIP
Sbjct: 367 LPPPVHQSAIP 377
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.130 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,663,773
Number of Sequences: 28952
Number of extensions: 278465
Number of successful extensions: 718
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 53
length of query: 297
length of database: 12,070,560
effective HSP length: 81
effective length of query: 216
effective length of database: 9,725,448
effective search space: 2100696768
effective search space used: 2100696768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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