Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000271-TA|BGIBMGA000271-PA|IPR000618|Insect cuticle
protein
(228 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 38 0.008
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 36 0.018
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z78015-2|CAB01431.1| 97|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.8
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 2.8
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 4.8
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 28 4.8
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical p... 27 8.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.4
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 69 TIQEAPTYHAAPAVHEASSYQAIHS---APTYHVAPAGHEAPTY----HAAPAAHS-ATT 120
T +Y P+ E S YQ APTY P+ P+Y HAA + A T
Sbjct: 274 TYPTTASYETTPSYPEPS-YQVSKKYPIAPTYETTPSYETTPSYLVQSHAASKKYPIAPT 332
Query: 121 YHTAPAIHATSAIHQVPAY 139
Y T P+ + T+ + VP+Y
Sbjct: 333 YETTPSSYDTTPSYSVPSY 351
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 36.3 bits (80), Expect = 0.018
Identities = 46/222 (20%), Positives = 61/222 (27%), Gaps = 15/222 (6%)
Query: 16 HAGLLHHGPAVSSQNIVRHDQTIHHETPIHYTALHTXXXXXXXXXXXXXXXIHTIQEAPT 75
H G HH PA + H HH + H H AP
Sbjct: 457 HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEH--HHAPA 514
Query: 76 YHAAPAVHEASSYQAIHSAPTYHVAPAGH----EAPTYHAAPAAHSATTYHTAPAIHATS 131
+H H ++ H +H APA H E T+H +H + +H H +
Sbjct: 515 HHGHHGEH--GTHHGHHG--EHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 570
Query: 132 AIHQVPAYXXXXXXXXXXXXXXXTALHAASAGHEDHYVDEYAHPKYGYSYSVEDPHTGDH 191
H H A A H H H +G Y H G H
Sbjct: 571 PAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAH 630
Query: 192 -----KSQHETRDGDVVKGEYSLLQPDGSFRKVTYTADHHNG 228
+H GD G + + HH G
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGG 672
Score = 33.1 bits (72), Expect = 0.17
Identities = 30/127 (23%), Positives = 42/127 (33%), Gaps = 9/127 (7%)
Query: 76 YHAAPAVH-EASSYQAIHSAPTYHVAPAGHE-APTYHAAPAAHS-ATTYHTAPAIHATS- 131
+H APA H S+ H +P +H H AP +H H A +H H T
Sbjct: 432 HHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHH 491
Query: 132 ---AIHQVPAYXXXXXXXXXXXXXXXTALHAASAGHEDHYVDEYAHPKYGYSYSVEDPHT 188
H PA+ H H H+ + + P + + H
Sbjct: 492 GHHGSHHSPAHHGHHGEHHHAPAHHGH--HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHH 549
Query: 189 GDHKSQH 195
G H S H
Sbjct: 550 GHHGSHH 556
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 73 APTYHAAPAVHEASSYQAIHSAP--TYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHAT 130
AP APA A+ Y A S P T APA E P APA + T APA T
Sbjct: 527 APAAEPAPAAEAAAGYDAPSSVPEETPAPAPAADETP----APAPAAEETPAPAPAAEET 582
Query: 131 SA 132
A
Sbjct: 583 PA 584
>Z78015-2|CAB01431.1| 97|Caenorhabditis elegans Hypothetical
protein R02D5.4 protein.
Length = 97
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 88 YQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHT--APAIHATSA 132
+Q H PTY + + P Y PA ++TT+++ P AT+A
Sbjct: 8 HQHRHQPPTYEDSIKSYSPPKYDMTPATTNSTTHNSMELPTSSATTA 54
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 71 QEAPTYH-AAPAVHEA--SSYQAIHSAPTYHVAPA-GHEAPTYHAAPAAHSATTYHTAPA 126
Q P + AAPAV A + A+ SAP APA G++A A AA +A Y A
Sbjct: 145 QSGPAFGGAAPAVGGAYQAGQAAVESAPLGGAAPAGGYQASAPAAVEAAPAAGGYQAAAP 204
Query: 127 IHATSAIHQ 135
A H+
Sbjct: 205 AGGAYAGHK 213
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 71 QEAPTYH-AAPAVHEA--SSYQAIHSAPTYHVAPA-GHEAPTYHAAPAAHSATTYHTAPA 126
Q P + AAPAV A + A+ SAP APA G++A A AA +A Y A
Sbjct: 161 QSGPAFGGAAPAVGGAYQAGQAAVESAPLGGAAPAGGYQASAPAAVEAAPAAGGYQAAAP 220
Query: 127 IHATSAIHQ 135
A H+
Sbjct: 221 AGGAYAGHK 229
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 69 TIQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIH 128
T + P + + A SYQ H+AP Y A + A H+A +H ++ +PA
Sbjct: 60 TTSQEPVKPVSQIPNGAPSYQYNHAAPNYPTAASAFPA---HSAGFSHQPPSF--SPATQ 114
Query: 129 ATSAIHQVP 137
+ H P
Sbjct: 115 PSMNGHHAP 123
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 4 KIVLICAVVAVSHAGLLHH 22
+++L+CA++AV+ A L HH
Sbjct: 2 RLLLLCALIAVASASLFHH 20
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 70 IQEAPTYHAAPA-----VHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTY 121
+Q + + H+ PA +H S+ + P +H P EAP Y A + T Y
Sbjct: 497 LQPSHSSHSGPAQAPQHIHFESASSTPSTPPAFHFIPPSSEAPYYVEINDADTETVY 553
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 71 QEAPTYHAAPAVHEASS-YQAIHSAPTYHVAPAGHEAPTYHAAP-AAHSATTYHTAPAIH 128
+ AP A PA A + A +AP APA AP AAP AA A AP
Sbjct: 474 EAAPAAPAEPAPAPAPAPAPAPEAAPAPEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVPE 533
Query: 129 ATSAIHQVPA 138
A PA
Sbjct: 534 VAPAPAPAPA 543
>Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 228
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 73 APTYH---AAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHT--APAI 127
AP Y AAPA + A AP APA AP Y AP +A + APA
Sbjct: 107 APAYAPALAAPAYAPGLAAPAFAPAPVVAAAPA--LAPAYAPAPVVAAAPAFAPAYAPAP 164
Query: 128 HATSAIHQVPA 138
A+ I PA
Sbjct: 165 VASPMIAAAPA 175
Score = 27.5 bits (58), Expect = 8.4
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 73 APTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSA 132
AP AAPA A +Y AP Y APA AP Y AP +A + AP + A A
Sbjct: 87 APAVAAAPAF-AAPAYAPALGAPAY--APA-LAAPAY--APGL-AAPAFAPAPVVAAAPA 139
Query: 133 IHQVPAY 139
+ PAY
Sbjct: 140 L--APAY 144
>Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical
protein B0035.16 protein.
Length = 375
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 168 YVDEYAHPKYGYSYSVEDPHTGDHKSQHETRDGDVVKGEY 207
++DEY PK G G+H H+ G + G+Y
Sbjct: 216 FLDEYIEPKPGRILLKNGSEIGNHHGIHQFTIGKRINGKY 255
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 67 IHTIQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 126
+ Q +P A ASS+ +AP P +HA P A T ++T P
Sbjct: 1267 LSVFQHSPQGAPITAPPPASSHHEHIAAPQARFTPTPGAPSPWHATP-AELKTPWNTTPQ 1325
Query: 127 IHA 129
HA
Sbjct: 1326 YHA 1328
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.127 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,552,524
Number of Sequences: 27539
Number of extensions: 216888
Number of successful extensions: 584
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 548
Number of HSP's gapped (non-prelim): 39
length of query: 228
length of database: 12,573,161
effective HSP length: 79
effective length of query: 149
effective length of database: 10,397,580
effective search space: 1549239420
effective search space used: 1549239420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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