Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000271-TA|BGIBMGA000271-PA|IPR000618|Insect cuticle
protein
(228 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin; g... 32 0.28
At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative... 31 0.49
At5g27690.1 68418.m03321 heavy-metal-associated domain-containin... 31 0.85
At2g04620.1 68415.m00470 cation efflux family protein potential ... 30 1.1
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 29 2.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 2.6
At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam ... 29 2.6
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 27 7.9
At1g73430.1 68414.m08500 sec34-like family protein contains Pfam... 27 7.9
>At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin;
glycine-rich protein 18 (GRP18) PMID:11431566;
Length = 228
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 73 APTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSAT 119
AP AAPA A + A +AP APA AP AAPAA +T
Sbjct: 181 APAAEAAPA---AGAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGGST 224
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/43 (44%), Positives = 20/43 (46%)
Query: 90 AIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSA 132
A AP APA AP AAPAA +A APA A A
Sbjct: 177 AAGGAPAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAPA 219
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/39 (46%), Positives = 19/39 (48%)
Query: 100 APAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIHQVPA 138
APA AP AAPAA +A APA A A PA
Sbjct: 181 APAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAPA 219
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 85 ASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 126
A A +AP APA AP AAPAA +A APA
Sbjct: 178 AGGAPAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAAPA 219
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Query: 100 APAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIHQVPA 138
A A AP AAPAA +A APA A A PA
Sbjct: 175 ASAAGGAPAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPA 213
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 78 AAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSA 118
AA A + A +AP APA AP AAPAA +A
Sbjct: 177 AAGGAPAAEAAPAAGAAPAAGAAPAAGAAPAAGAAPAAGAA 217
>At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana; similar to allyl alcohol
dehydrogenase [Nicotiana tabacum] GI:6692816
Length = 350
Score = 31.5 bits (68), Expect = 0.49
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 167 HYVDEYAHPKYGYSYS-VEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSFRKVTYT 222
HY+ P YG+S S V D D+K + + G V GEYSL+ PD S K+ +T
Sbjct: 77 HYIP--GEPIYGFSVSKVIDSGHPDYK-KGDLLWGLVGWGEYSLITPDFSHYKIQHT 130
>At5g27690.1 68418.m03321 heavy-metal-associated domain-containing
protein very low similarity to copper homeostasis factor
from Arabidopsis thaliana [gi:3168840]; contains Pfam
heavy metal associated domain PF00403
Length = 352
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 70 IQEAPTYHA---APAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAP 125
I AP H P H Q H PT H P H Y P + YHT P
Sbjct: 214 IYSAPQDHHIIHGPPPHLHHHQQQNHPYPTVHSPPRHHPQQMYGPGPGLPPPSFYHTQP 272
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 158 HAASAGHEDHYVDEYAHPKYGYSYSVEDPHTGDHKSQ---HETRDGDVVKGEYSLLQPDG 214
H+ S HE+H+ ++ H + + + E H DH+ Q H + + +S QP+
Sbjct: 585 HSDSHKHEEHHEHDHHHHSHSHKHE-ECNHNHDHEHQSHSHNHEECNHNHDHHSDHQPEK 643
Query: 215 SFRKVTYTADHH 226
S +K DH+
Sbjct: 644 SEKKEHRHIDHN 655
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 73 APTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSA 132
AP PA ASSY +S Y P PTY AP+ S+ + + +A++A
Sbjct: 47 APAPAPVPAPSPASSYGPQYSQEGYASQPNNPPPPTYAPAPSPASSYGHQYSQEGYASAA 106
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 73 APTYHAAPAVHEASSYQAIHSAPTYH-VAPAGHEAPTYHAAPAAHSATTYHTAP 125
AP Y+++P Y PTYH ++P P + P +H ++ P
Sbjct: 706 APYYYSSPQPPPPPHYSLPPPTPTYHYISPPPPPTPIHSPPPQSHPPCIEYSPP 759
>At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1006
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 70 IQEAPTYHAAPAVHEASSY-QAIHSAPTYHVAPAGHEAPTYHAAPAAHS 117
++ P Y H+ ++Y Q ++S ++H AP G+ PT AP S
Sbjct: 355 LETKPLYETPFQGHQRATYPQEMNSQSSFHQAPLGYRQPT-QTAPLVDS 402
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 79 APAVHEAS-SYQAIHSAPTYHVAPAG-HEAPTYHAAPAAHSATTYHTAPAIHATSAIHQV 136
+P+V +A+ S + H T P H P A Y TAP + +HQ+
Sbjct: 575 SPSVSDAAGSIPSNHPNSTMMPPPPNNHMRSVSSGKPEMGQAGVYTTAPGVGGAQMVHQI 634
Query: 137 P 137
P
Sbjct: 635 P 635
>At1g73430.1 68414.m08500 sec34-like family protein contains Pfam
PF04136: Sec34-like family profile; similar to Conserved
oligomeric Golgi complex component 3 (Vesicle docking
protein SEC34 homolog) (p94) (Swiss-Prot:Q96JB2) [Homo
sapiens]
Length = 784
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 169 VDEYAH-PKYGYSYSVEDPHTGD 190
V E+ H P+ G S SVED H GD
Sbjct: 58 VHEHVHRPENGLSVSVEDTHLGD 80
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.127 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,061,953
Number of Sequences: 28952
Number of extensions: 183524
Number of successful extensions: 433
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 421
Number of HSP's gapped (non-prelim): 18
length of query: 228
length of database: 12,070,560
effective HSP length: 79
effective length of query: 149
effective length of database: 9,783,352
effective search space: 1457719448
effective search space used: 1457719448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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