Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000270-TA|BGIBMGA000270-PA|IPR000618|Insect cuticle
protein
(283 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40450.1 68418.m04905 expressed protein 33 0.16
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 33 0.16
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 33 0.29
At3g20260.1 68416.m02566 expressed protein 33 0.29
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 32 0.50
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 32 0.50
At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9) i... 31 0.66
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 31 0.66
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 31 1.2
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 31 1.2
At5g53440.1 68418.m06641 expressed protein 30 1.5
At5g20590.1 68418.m02445 expressed protein various predicted pro... 30 1.5
At4g28820.1 68417.m04120 zinc finger (HIT type) family protein c... 30 2.0
At3g59370.1 68416.m06621 expressed protein hypothetical protein ... 30 2.0
At1g12080.2 68414.m01397 expressed protein 30 2.0
At4g36210.2 68417.m05152 expressed protein contains Pfam PF05277... 29 2.7
At4g36210.1 68417.m05151 expressed protein contains Pfam PF05277... 29 2.7
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 29 2.7
At2g22795.1 68415.m02704 expressed protein 29 2.7
At2g18760.1 68415.m02184 SNF2 domain-containing protein / helica... 29 2.7
At1g50910.1 68414.m05724 expressed protein 29 2.7
At1g74690.1 68414.m08650 calmodulin-binding family protein low s... 29 3.5
At3g49650.1 68416.m05426 kinesin motor protein-related several k... 29 4.7
At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxylating]... 29 4.7
At1g26790.1 68414.m03261 Dof-type zinc finger domain-containing ... 29 4.7
At5g53430.1 68418.m06640 PHD finger family protein / SET domain-... 28 6.2
At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) famil... 28 6.2
At4g39190.1 68417.m05549 expressed protein ; expression support... 28 6.2
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 28 6.2
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 28 8.2
At3g05675.2 68416.m00633 expressed protein 28 8.2
At3g05675.1 68416.m00632 expressed protein 28 8.2
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 162 DKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNAERLIQKDLVAVVD 221
+K +P E V+ + + E + E ++ EN EN+ ++ E+ +K ++
Sbjct: 1002 EKHEPTNEEVKSDEVIEVLSASPSKEL-EGETVVEAENIENIKENEEEQAAEKIQKSLET 1060
Query: 222 STTPLIIENEKSLEGSTEEINTVTTETSVIDAMKGEEI 259
T +E+ SL S+EE + VT ++D EE+
Sbjct: 1061 VQT---VESPSSLLFSSEEQDHVTVAEEIVDEKAKEEV 1095
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 33.5 bits (73), Expect = 0.16
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 149 EKNTAKDVSFDNTDKGKPVQEN-VQDSVGFQ-KSATKTDVETSDKEITLKPENAENVGKS 206
+ N + S + D K + EN + V + K + T +KE +K E E V +
Sbjct: 291 QDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEE 350
Query: 207 NAERLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSVIDAMKGEEIIKKDDPS 266
E+ K+ D + E EK EE V E S K KK+ PS
Sbjct: 351 EKEKEKVKE-----DDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVVKGKKESPS 405
Query: 267 PDNEVASS 274
N+V +S
Sbjct: 406 AYNDVIAS 413
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 198 ENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSVIDAMKGE 257
E AE+ G + + KD AVV +I+NE +E TEE+ + + + + E
Sbjct: 245 EKAESSGPTPVASPVGKDCNAVVAELEEKLIKNEDDIEEKTEEMK--EQDNNQANKSEEE 302
Query: 258 EIIKK 262
E +KK
Sbjct: 303 EDVKK 307
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 149 EKNTAKDVSFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNA 208
++ T + + + + K + +DS+ + A D KE EN E GK ++
Sbjct: 505 QQRTEVEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAE---ENLEKSGKKSS 561
Query: 209 ERLIQKDLVAVVDSTTPLIIE-NEKSLEGSTEEINTVTTETSVIDAMKGEE 258
++ +KD + +V+ L +E N + E ++ N T+ S A K E
Sbjct: 562 KKTKKKDSLNIVEEAQVLSVEVNNVAQEEASPINNPKDTDASFTPAKKTTE 612
>At3g20260.1 68416.m02566 expressed protein
Length = 437
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 229 ENEKSLEGSTEEINTVTTETSVIDAMKGEEIIKKDDPSPDNEV 271
E E + E+ + TE VID+ KG+EI DD NEV
Sbjct: 20 EKEDKILAQQEQARSENTEAGVIDSGKGDEIEDDDDDFITNEV 62
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 174 SVGFQKSATKTDVETSDKEITLKPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKS 233
SVG +A + VE +DK K ++ +R ++ D ++DS L+ E E +
Sbjct: 683 SVGSGVAALRKVVEGNDKRSRAKKAPSQEASPKEVDRTLEDD---IIDSAR-LLAEEETA 738
Query: 234 LEGSTEEINT-VTTETSVIDAMKGEEIIKKDDPSP 267
TEE++T V + + D I PSP
Sbjct: 739 ASTYTEEVDTPVGSSSEESDDFWKSFINPSSSPSP 773
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 31.9 bits (69), Expect = 0.50
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 149 EKNTAKDVSFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNA 208
++N A++ + + + K + +DS+ + A D KE EN E GK ++
Sbjct: 656 QRNEAEE-NMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAE---ENLEKSGKKSS 711
Query: 209 ERLIQKDLVAVVDSTTPLIIE-NEKSLEGSTEEINTVTTETSVIDAMKGEE 258
+R +KD + +V+ L +E N + E ++ N T+ A K E
Sbjct: 712 KRSKKKDSLNIVEEAQVLSVEVNNVAQEEASPINNPKDTDALFTPAKKNTE 762
>At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9)
identical to SUVH9 [Arabidopsis thaliana] GI:13517759;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH9 (SUVH9) GI:13517758
Length = 650
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 200 AENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSVIDAM----- 254
AE+ + A+RL + D VAV+DS T I+ E++ E +T + SV
Sbjct: 66 AESARSAFAQRLQRHDDVAVLDSLTGAIVPVEENPEPEPNPYSTSDSSPSVATQRPRPQP 125
Query: 255 KGEEIIKKDDPSPDNE 270
+ E+++ D P++E
Sbjct: 126 RSSELVRITDVGPESE 141
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 149 EKNTAKDVSFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKE--ITLKPENAENVGKS 206
+KN V+ N G + + + S GF++S +T ++KE P ++++ GK
Sbjct: 424 DKNEKVSVTERNGKLGTHLSDEISVSEGFRRSTRQTTASKNEKEPDSHSTPSSSDSGGKL 483
Query: 207 NAERLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINT 243
N R + V DS L ++ TE+I++
Sbjct: 484 NKVRFVNG---VVQDSKVKLTDSGPEASTHDTEKISS 517
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 149 EKNTAKDVSFDNTDKGKPVQE-NVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSN 207
EKN A+ + T+KG+ V+E N +D V + +VE DK+ K EN + +
Sbjct: 197 EKNEAELAEEEETNKGEEVKEANKEDDVEADTKVAEPEVE--DKKTESKDENEDKEEEKE 254
Query: 208 AER 210
E+
Sbjct: 255 DEK 257
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 201 ENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGSTE---EINTVTTETSVIDAMKGE 257
E + N ER ++K++V D T E+ ++GS+E E + +T ++ K +
Sbjct: 374 EELNIDNEERDVKKEVVGEADETDDEYFVAEEDMQGSSESEDEDDEMTLLKKMVSGQKNK 433
Query: 258 E--IIKKDDPSPDNEV 271
+ ++ K++ + EV
Sbjct: 434 QKNVVSKEEDEDETEV 449
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 64 SDKKTGDHK--THRESRDGDRVRGEYSLVEPDGSLRKVEYDADDHNGFSAVVSKGVHKHG 121
S K G H+ + RES+D D+ E +G K YD DDH+ A K K
Sbjct: 124 SGKSDGKHRESSRRESKDVDK---EKDRKYKEGKSDKF-YDGDDHHKSKAGSDKTESKAQ 179
Query: 122 DHAYS 126
DHA S
Sbjct: 180 DHARS 184
>At5g20590.1 68418.m02445 expressed protein various predicted
proteins, Arabidopsis thaliana
Length = 485
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 186 VETSDKEITLK--PENAENVGKSNAERLIQKDLVA--VVDSTTPLIIENEKSLEGSTEEI 241
+E D ++T++ P+ E+ + + ++ +L V DS T E E+ S E+
Sbjct: 66 IEPHDGDVTVETNPKEVEDSRRGGDDVAVETELKLKDVEDSHTEKTEEEEEGRGESPGEV 125
Query: 242 NTVTTETSVIDAMKGEEIIKKDDPSPDNE 270
+ + E +VI+ M+G ++ K D+E
Sbjct: 126 SVESVEHAVIEKMRGCDLYKGSWVKGDDE 154
>At4g28820.1 68417.m04120 zinc finger (HIT type) family protein
contains Pfam profile: PF04438 HIT zinc finger
Length = 173
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 191 KEITLK-PENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETS 249
KE+ +K PE A +V + ++ + P+I+E EK + T + + + +
Sbjct: 61 KEVPVKRPEEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKT-QFEAIASSSE 119
Query: 250 VIDAMKGEEIIK 261
+ +A+K E + K
Sbjct: 120 IREALKDEPLQK 131
>At3g59370.1 68416.m06621 expressed protein hypothetical protein
F12F1.4 - Arabidopsis thaliana, EMBL:AC002131
Length = 95
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 182 TKTDVETSDKEITLKPENA--ENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGST- 238
T VE + E+ PE E+ K+N + +++ AV+ + TP ++E EK E T
Sbjct: 10 TSVAVEIVETEVNQHPEEVFVEDAEKTNED---EEEKAAVI-TETPTVVEEEKKAEEVTE 65
Query: 239 --EEINTVTTETSVIDAMKGEEI 259
EE T E + EE+
Sbjct: 66 TPEEKKTEALEEKQTEVAAAEEV 88
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 161 TDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNAERLIQKDLVAVV 220
T+ + +E+V +V QKS VET+++ + E AE + ++ +KD V
Sbjct: 31 TEVTQQPEESVP-AVTEQKSEAPI-VETNEEVVV---EEAEKKDEETEKKTEEKDEKTEV 85
Query: 221 DSTTPLIIENEKSLEGSTEEINTVTTE--TSVIDAMKGE 257
+ TP++ E EK E TE V E T V++ + E
Sbjct: 86 ITETPVVEEEEKKAEEVTETPAVVEEEKKTEVVEEKQTE 124
>At4g36210.2 68417.m05152 expressed protein contains Pfam PF05277:
Protein of unknown function (DUF726)
Length = 516
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 187 ETSDKEITL-KPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGST 238
E K++ L K ++ + +S A ++ +V + S P ++ENEKS+E T
Sbjct: 47 EVKSKDVDLDKEKDKKEAAESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVT 99
>At4g36210.1 68417.m05151 expressed protein contains Pfam PF05277:
Protein of unknown function (DUF726)
Length = 672
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 187 ETSDKEITL-KPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGST 238
E K++ L K ++ + +S A ++ +V + S P ++ENEKS+E T
Sbjct: 169 EVKSKDVDLDKEKDKKEAAESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVT 221
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 150 KNTAKDVS-FDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNA 208
++++ D S D +K K ++D + S+ + D +SD+EI + E + K+
Sbjct: 63 ESSSSDASDSDEEEKTKETPSKLKD----ESSSEEEDDSSSDEEIAPAKKRPEPIKKAKV 118
Query: 209 ERLIQKDLVAVVDSTTPL-----IIENEKSLEGSTEEINTVTTET-------SVIDAMKG 256
E D + T P+ ++E K S+++ ++ ET +V++ K
Sbjct: 119 ESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDEETVPVKKQPAVLEKAKI 178
Query: 257 EEIIKKDDPSPDNE 270
E DD S D E
Sbjct: 179 ESSSSDDDSSSDEE 192
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 155 DVSFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNAERLIQK 214
+VS KGK + ++ Q+ + + ET +KE + E + E++
Sbjct: 421 EVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESS 480
Query: 215 DLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSVIDAMKGEEIIKKDDPSPDNEVASS 274
D T I E S T+E T E ++ E+ +K+ + DNE +SS
Sbjct: 481 SQEKNEDKETEKI---ESSFLEETKEKEDETKEKE--ESSSQEKTEEKETETKDNEESSS 535
>At2g18760.1 68415.m02184 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|Q03468 Excision
repair protein ERCC-6 (Cockayne syndrome protein CSB)
{Homo sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1187
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 180 SATKTDVETSD-KEITLKPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGST 238
SA D+E E T KP+N E G S E+ Q + ++ S+ ++ ++++
Sbjct: 17 SANPEDLEQKILDEATKKPDNDE--GGSVEEKSTQLEGTNLLSSSQNELLNKLRAVKF-- 72
Query: 239 EEINTVTTETSVIDAMKGEEIIKKDDPS 266
EI+ V + +D + E+ +KKDD S
Sbjct: 73 -EIDAVASTVENVDEIAAEKGLKKDDES 99
>At1g50910.1 68414.m05724 expressed protein
Length = 552
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 157 SFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKP-ENAENVGKSNAERLIQKD 215
+ N++ KP+++NV + V + S + S L P A+N G + E D
Sbjct: 214 TLQNSENSKPMEKNVSEDVTTRDSLVQYQTSVSSLAEDLSPLLRADNSGATVRESSTPID 273
Query: 216 LVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSV 250
A + L E+ ++ E +T +V ET V
Sbjct: 274 EAASSKTNIGLQPEDSENPEDATTRDCSVQYETFV 308
>At1g74690.1 68414.m08650 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 587
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 167 VQENVQDSVGFQKSATKTDV-ETSDKEITLKPENAENVGKSNAERLIQKDLVAVVDSTTP 225
V E ++ V K ++ E ++E+ G + LV +DS
Sbjct: 379 VHETAEEPVNVCDEKKKQEISEQPEEEVHALEMEVHTPGPLETNEALDSSLVNQIDSNEK 438
Query: 226 LIIENEKSLEGSTEEINTVTTETSVIDAMK-GEEIIKKDDPSPDNEVASSHYH 277
++E + S+E T+E T A K ++ KK + E S+ H
Sbjct: 439 AMVEEKPSMEKDTKEEKTPKPNNKENSAGKENQKSRKKGSATSKTEREESNGH 491
>At3g49650.1 68416.m05426 kinesin motor protein-related several
kinesin-like proteins
Length = 813
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 167 VQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNAERLIQKDLVAVVDSTTPL 226
+ ENVQD + QK+ + + ET+ + T +++ + A++ +KD+V + S +
Sbjct: 411 ISENVQDRINLQKALFELE-ETNLRNRT----ELQHLDDAIAKQATEKDVVEALSSRRQV 465
Query: 227 IIEN 230
I++N
Sbjct: 466 ILDN 469
>At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxylating],
putative / glycine decarboxylase, putative / glycine
cleavage system P-protein, putative strong similarity to
SP|P26969 Glycine dehydrogenase [decarboxylating],
mitochondrial precursor (EC 1.4.4.2) {Pisum sativum};
contains Pfam profile PF02347: Glycine cleavage system
P-protein
Length = 1044
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 MYSQLVLLICFVGGIKTVFVDPNEGPYAGEDGAWKTIKTYH 41
M++ L L+C + G + + PN G AGE I+ YH
Sbjct: 620 MFTNLGELLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYH 659
>At1g26790.1 68414.m03261 Dof-type zinc finger domain-containing
protein similar to H-protein promoter binding factor-2b
GI:3386548 from [Arabidopsis thaliana]
Length = 396
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 172 QDSVGFQKSATKT-DVETSDKEITLKPENAENVGKSNAERLIQK 214
+D+ + S+TK E+SD +T +P++ N K NAE + Q+
Sbjct: 202 EDTDNYNSSSTKILSFESSDSLVTERPKHQSNEVKINAEPVSQE 245
>At5g53430.1 68418.m06640 PHD finger family protein / SET
domain-containing protein (TX5) contains Pfam domain,
PF00628: PHD-finger and PF00856: SET domain; identical
to cDNA trithorax 5 (TX5) partial cds GI:16118406
Length = 1043
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 182 TKTDVETSDKEITLKPENAENVGKSNAERLIQKDLVAV 219
TK D E SD E KP++ +GK+NA ++ ++ V
Sbjct: 468 TKFDFELSDSE---KPDSKSKLGKNNAPMVLPDKVIVV 502
>At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
Length = 458
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 205 KSNAERLIQKDLVAVVDSTTPLIIENEK-SLEGSTEEINTVTTETS 249
K N I ++V+ ++STTP II K S + + +N V E S
Sbjct: 139 KDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVS 184
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 176 GFQKSATKTDVETSDKEITLKPENAENVGKSNAER-LIQKDLV--AVVDSTTPLIIENEK 232
GF + ++ + S+ E K EN K N E+ I + V +V + T II +K
Sbjct: 116 GFSQDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTKRIISEKK 175
Query: 233 SLEGSTEEINTVTTETSVIDAMKGEEIIKKD 263
+ E++ T +++ ++ K E+ KD
Sbjct: 176 VKQSKPEKL---TKQSTSVNREKQSEVEHKD 203
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 58 EFEYSVSDKKTG--DHKTHRESRDGDRVRGEYSLVEPDGSLRKV-EYDADDH 106
E E DK TG DH H+E + V + L + S +KV E + DH
Sbjct: 1056 EEETYPKDKHTGGEDHNDHKEEEQKENVIAKAELNTEEDSFKKVEEIEKQDH 1107
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/115 (17%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 150 KNTAKDVSFDNTDKGKPVQENVQDSVGFQKSATKTDVETSDKEITLKPENAENVGKSNAE 209
+ + + V +N +KG Q +++ + +++ + +VET D E + + ENV + +
Sbjct: 85 EESTETVKHENGEKGAE-QVELKEPILVKETVAEVNVETVDTEKAEEKQTVENVLIEDHK 143
Query: 210 RLIQKDLVAVVDSTTPLIIENEKSLEGSTEEINTVTTETSVIDAMKGEEIIKKDD 264
+ +V V +ST ++ + ++ + E ++++ EE +++
Sbjct: 144 DQEETKIVDVSESTDEAEVQQVEPVDVQPVKDAEKAEEKPTVESVVEEETKDREE 198
>At3g05675.2 68416.m00633 expressed protein
Length = 441
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 191 KEITLKPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGS--TEEINTVT--T 246
+EITLKP +E + K + R++ D+ V T + + + + + +E++ V
Sbjct: 239 EEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQL 298
Query: 247 ETSVIDAMK 255
ET+V++A++
Sbjct: 299 ETTVVEAVE 307
>At3g05675.1 68416.m00632 expressed protein
Length = 441
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 191 KEITLKPENAENVGKSNAERLIQKDLVAVVDSTTPLIIENEKSLEGS--TEEINTVT--T 246
+EITLKP +E + K + R++ D+ V T + + + + + +E++ V
Sbjct: 239 EEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQL 298
Query: 247 ETSVIDAMK 255
ET+V++A++
Sbjct: 299 ETTVVEAVE 307
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,434,105
Number of Sequences: 28952
Number of extensions: 341498
Number of successful extensions: 865
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 857
Number of HSP's gapped (non-prelim): 40
length of query: 283
length of database: 12,070,560
effective HSP length: 80
effective length of query: 203
effective length of database: 9,754,400
effective search space: 1980143200
effective search space used: 1980143200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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