Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000269-TA|BGIBMGA000269-PA|IPR000618|Insect cuticle
protein
(232 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1) 32 0.46
SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5) 31 0.81
SB_4668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 4.3
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 4.3
SB_18642| Best HMM Match : CsrA (HMM E-Value=8.7) 28 5.7
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 28 7.5
SB_49695| Best HMM Match : Homeobox (HMM E-Value=0.068) 27 10.0
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 180 KGSYSFHEADGSIRTVEYTADAHNGFNAVVH 210
KGSY H+ DG RT+EY + G+ H
Sbjct: 1742 KGSYDTHDVDGRRRTIEYYSGTPQGYLPPAH 1772
>SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1)
Length = 159
Score = 31.9 bits (69), Expect = 0.46
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 81 ESVSSQNIIRHDQPQTINYAA-PVAKLAVATP--VTYHAAPAPVTYHAAPAAVSYHSAPV 137
+ V+ ++ + P + Y P TP VTY+ P VTY V+Y P
Sbjct: 33 DCVTPYHVTYYVTPYHVTYCVTPYHVTYCVTPYHVTYYVTPYHVTYSVTLYHVTYCVTPY 92
Query: 138 AKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGDAVK 180
A H+ +EI K + + DG QE +D K
Sbjct: 93 ATAATHKKKEI---KQDGVQAEQDGGQAKQDGGQEKQDSGQEK 132
>SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5)
Length = 473
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 159 VADGHSGDNKSQQEVRDGDAVKGSYSFHEADGSIRTVEYTADAHNGFNAVVHNTAPTAAP 218
V D GD + GD V+ S SF G V Y A G A + ++ PT
Sbjct: 187 VCDSFQGDYARVSDSFQGDYVRVSDSFQSFQGDYARVRYAAAGFFGRQA-IDDSRPTLEE 245
Query: 219 THIKAVPALQYYHH 232
+ + Y HH
Sbjct: 246 SRLHEGTKYGYGHH 259
>SB_4668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 111 PVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYS 158
P H P + AP+ V+++ P++K H+ +E + +Y YN S
Sbjct: 125 PQKIHLEADPGSTTIAPS-VTFYWLPISKTKTHRVQEYDHLQYHYNTS 171
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 100 AAPVAKLA-VATPVTYHAAPA-PVTYHAAPAAVSYHSAPVA 138
AAP A++ A VT AAPA PVT AAPA H A
Sbjct: 90 AAPAARVTPTAARVTPTAAPAAPVTPTAAPAPAQSHEEVAA 130
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 100 AAPVAKLA-VATPVTYHAAPA-PVTYHAAPAAVSYHSAPVA 138
AAP A++ A VT AAPA PVT AAPA H A
Sbjct: 247 AAPAARVTPTAARVTPTAAPAAPVTPTAAPAPAQSHEEVAA 287
>SB_18642| Best HMM Match : CsrA (HMM E-Value=8.7)
Length = 293
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 94 PQTINYAAPVAKLAVATP---VTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAY 150
P I P + + V P + YHAA HA ++H+A K+ A I Y
Sbjct: 168 PSLITVTLPPSNITVTLPPSFINYHAATTQYDRHATTKLYNHHAA--TKLYNRHAATILY 225
Query: 151 PKY 153
++
Sbjct: 226 NRH 228
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 27.9 bits (59), Expect = 7.5
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 101 APVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYP-KYEYNYSV 159
AP A LA P AAPAP AAPA V +AP A A P + + S
Sbjct: 82 APSAPLAA--PAQVAAAPAPAA--AAPAPVPAAAAPAPAPAAPSAAAAPAPVRSVPSTSP 137
Query: 160 ADGHSGDNKSQQEVRDGDAVKGSYSFH 186
+ S Q + +V SYS++
Sbjct: 138 SSVRSATPYYPQTQQQQSSVSSSYSYY 164
>SB_49695| Best HMM Match : Homeobox (HMM E-Value=0.068)
Length = 919
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 162 GHSGDNKSQQEVRDGDAVKGSYSF 185
G SGD +++E D DA + YSF
Sbjct: 853 GASGDKVAEEEGEDDDAAEAEYSF 876
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.124 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,506,701
Number of Sequences: 59808
Number of extensions: 240003
Number of successful extensions: 474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 461
Number of HSP's gapped (non-prelim): 24
length of query: 232
length of database: 16,821,457
effective HSP length: 80
effective length of query: 152
effective length of database: 12,036,817
effective search space: 1829596184
effective search space used: 1829596184
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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