Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000269-TA|BGIBMGA000269-PA|IPR000618|Insect cuticle
protein
(232 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 31 0.70
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 30 1.2
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 2.1
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 29 2.8
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 29 2.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical pr... 28 6.5
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 28 6.5
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 28 6.5
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 6.5
AF098988-11|AAK73863.2| 735|Caenorhabditis elegans Suppressor o... 28 6.5
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 6.5
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 27 8.7
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 27 8.7
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 8.7
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 8.7
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 8.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 27 8.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 27 8.7
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 86 QNIIRHDQPQTINYAAPVAKLAV-ATPVTYHAAPAPVTYHAAPAAVSYHSAPVA 138
+N+ ++ + I YA P+A++AV A P PAPV AAPA+ S +A V+
Sbjct: 150 KNVAMGEKIREIRYAEPIAEVAVEAAPAN---IPAPVEI-AAPASASSSAAAVS 199
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 83 VSSQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSY------HSAP 136
V+ +I + QP Y APVA +A PAP+ H AP ++ H AP
Sbjct: 359 VAPAHITQEIQPAPQPYVAPVAPVAQEIHTIQPIQPAPI--HPAPLQPAHVVQETAHVAP 416
Query: 137 VAKIVAHQ 144
K+VA +
Sbjct: 417 ETKVVAEE 424
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/158 (21%), Positives = 54/158 (34%), Gaps = 7/158 (4%)
Query: 25 HYSSAGAVSSQSIVRHDESHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAESVS 84
HY+S SSQ+I + G S+ S S
Sbjct: 529 HYNS----SSQAIPLGGPNQGHSSSSYTTETRVTGGGTGAPVSNNYSNQNYSSSAYNSQS 584
Query: 85 SQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQ 144
SQ+ + Q NY + + ++ T P PV + + SYH+ + A Q
Sbjct: 585 SQHQTKSIPVQ--NYQSSNYNKSYSSQTTTQHQPQPVAANNN-YSTSYHTERSSTTTAQQ 641
Query: 145 AEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGDAVKGS 182
+ IA P + N S + HS G ++K +
Sbjct: 642 PQTIALPPPQNNSSHTETHSSTGPIMMHSPGGHSMKST 679
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 100 AAPVAKLAVATPV--TYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQA 145
+ P A + A P T APA VT AAPAAV+ +A VA A
Sbjct: 192 SGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAA 239
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 115 HAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQ 170
+AAPAP + A PA + SAP IVA + A P ++ + V D +G ++S+
Sbjct: 80 YAAPAP--FAAQPAQFAVQSAPPQPIVAPPPQAYAAP-HKRHVDVMDIDTGVDQSE 132
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 101 APVAKLAVATPVTYHAA-PAPVTYHAAPAAVS-YHSAPVAKIVAHQAEEIAY 150
APV + VA P AA PAP AAPAA + +AP A ++++ AY
Sbjct: 108 APVEQAPVAVPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAY 159
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 101 APVAKLAVATPVTYHAA-PAPVTYHAAPAAVS-YHSAPVAKIVAHQAEEIAY 150
APV + VA P AA PAP AAPAA + +AP A ++++ AY
Sbjct: 436 APVEQAPVAVPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAY 487
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 3.7
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Query: 96 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQ--AEEI--AYP 151
T N A+ VA+ AV TP APAP A S AP A + A E A P
Sbjct: 250 TANAASAVAEPAVETP-----APAPAAEETPAPATSSEEAPAPAPTAEETPAPETVSAAP 304
Query: 152 KYEYNYSVADGHSGDNKSQQEVRDGDAVKGSYSFHEADGSIRTVEYTADAH 202
+ +Y A G + + DA + S AD + V+ ++ H
Sbjct: 305 EAANSYDSAGGDAATAPAPSS-EAADAAAPTDSAASADTTAALVDTSSSEH 354
>Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 228
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 101 APVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIA 149
APV A A Y APAPV A A +Y APVA + A +A
Sbjct: 131 APVVAAAPALAPAY--APAPVVAAAPAFAPAYAPAPVASPMIAAAPALA 177
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 92 DQPQTINYAAPVAK---LAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEI 148
DQ ++IN A P A A P T A P + + AA ++V+HQA
Sbjct: 355 DQKKSINSANPFANDVASAAPAPATSAAQPDLLDMFQSSAAPLLQCNRKLQMVSHQAAPF 414
Query: 149 AYP 151
YP
Sbjct: 415 GYP 417
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 101 APVAKLAVATPVTYHAAP----APVTYHAAPAA 129
AP A++A TPV AP AP T AAPAA
Sbjct: 256 APAAEVAPETPVAAPMAPAAPAAPATPEAAPAA 288
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 96 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPK 152
T+ P + +V V +APAP+++ AA AA ++ + K A + A P+
Sbjct: 196 TVTEVQPPVEESVTATVPTSSAPAPISF-AAVAAAAHRKEALRKHQAQNPQPAAPPR 251
>AF098988-11|AAK73863.2| 735|Caenorhabditis elegans Suppressor of
pal-1 protein 2 protein.
Length = 735
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 101 APVAKLAVATPVTYHAAP----APVTYHAAPAA 129
AP A++A TPV AP AP T AAPAA
Sbjct: 256 APAAEVAPETPVAAPMAPAAPAAPATPEAAPAA 288
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 96 TINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPK 152
T+ P + +V V +APAP+++ AA AA ++ + K A + A P+
Sbjct: 196 TVTEVQPPVEESVTATVPTSSAPAPISF-AAVAAAAHRKEALRKHQAQNPQPAAPPR 251
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 124 HAAPAAVSYHSAPVAKIVAHQAEEIAY--PKYEYNYSVA-DGHSGDNKSQQEVRDGDAVK 180
H P ++S SA + + +E A P +Y VA D G Q + RD D +
Sbjct: 721 HGEPVSLS-SSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE 779
Query: 181 GSYSFHEADG-SIRTVE-YTADAHNGFNAVVHNTA 213
+YSF + +G S + + ++ D H G + H +
Sbjct: 780 VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVS 814
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 124 HAAPAAVSYHSAPVAKIVAHQAEEIAY--PKYEYNYSVA-DGHSGDNKSQQEVRDGDAVK 180
H P ++S SA + + +E A P +Y VA D G Q + RD D +
Sbjct: 721 HGEPVSLS-SSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE 779
Query: 181 GSYSFHEADG-SIRTVE-YTADAHNGFNAVVHNTA 213
+YSF + +G S + + ++ D H G + H +
Sbjct: 780 VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVS 814
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 100 AAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVA 138
A A L A P + A AP AAPAA Y +A A
Sbjct: 167 AVESAPLGGAAPAGGYQASAPAAVEAAPAAGGYQAAAPA 205
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 100 AAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVA 138
A A L A P + A AP AAPAA Y +A A
Sbjct: 183 AVESAPLGGAAPAGGYQASAPAAVEAAPAAGGYQAAAPA 221
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 124 HAAPAAVSYHSAPVAKIVAHQAEEIAY--PKYEYNYSVA-DGHSGDNKSQQEVRDGDAVK 180
H P ++S SA + + +E A P +Y VA D G Q + RD D +
Sbjct: 721 HGEPVSLS-SSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE 779
Query: 181 GSYSFHEADG-SIRTVE-YTADAHNGFNAVVHNTA 213
+YSF + +G S + + ++ D H G + H +
Sbjct: 780 VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVS 814
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 94 PQTINYAAPVAKLAVATPVTYHAAPAPVTYHAAPAAVSYHSAPVA 138
P + AP+ A A Y AP P AAPA +AP A
Sbjct: 52 PMMMAPPAPLPAYAPAPLPAYAPAPLPAPVFAAPAPAPVFAAPFA 96
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 124 HAAPAAVSYHSAPVAKIVAHQAEEIAY--PKYEYNYSVA-DGHSGDNKSQQEVRDGDAVK 180
H P ++S SA + + +E A P +Y VA D G Q + RD D +
Sbjct: 721 HGEPVSLS-SSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE 779
Query: 181 GSYSFHEADG-SIRTVE-YTADAHNGFNAVVHNTA 213
+YSF + +G S + + ++ D H G + H +
Sbjct: 780 VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVS 814
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Query: 80 AESVSSQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHA-APAAVSYHSAPVA 138
AE+ + + + P + APV PV PAPV AP A + +
Sbjct: 282 AETEAPVVVAETEAPAVVETEAPVVIEETEAPVVVEETPAPVVEETQAPVAAAKEESTYD 341
Query: 139 KIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGD 177
IV Q E +V + + + +E +G+
Sbjct: 342 DIVEEQPSTATETATEQVDTVEETNEAVEYADEEGDEGN 380
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Query: 80 AESVSSQNIIRHDQPQTINYAAPVAKLAVATPVTYHAAPAPVTYHA-APAAVSYHSAPVA 138
AE+ + + + P + APV PV PAPV AP A + +
Sbjct: 222 AETEAPVVVAETEAPAVVETEAPVVIEETEAPVVVEETPAPVVEETQAPVAAAKEESTYD 281
Query: 139 KIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGD 177
IV Q E +V + + + +E +G+
Sbjct: 282 DIVEEQPSTATETATEQVDTVEETNEAVEYADEEGDEGN 320
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.124 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,846,578
Number of Sequences: 27539
Number of extensions: 181901
Number of successful extensions: 412
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 385
Number of HSP's gapped (non-prelim): 42
length of query: 232
length of database: 12,573,161
effective HSP length: 79
effective length of query: 153
effective length of database: 10,397,580
effective search space: 1590829740
effective search space used: 1590829740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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