BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000268-TA|BGIBMGA000268-PA|IPR000618|Insect cuticle protein (166 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.2 Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.2 AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 2.2 AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 2.2 >Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein W02B9.1b protein. Length = 2920 Score = 28.7 bits (61), Expect = 2.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 78 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 134 ++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801 Query: 135 DHNGFNAVVHNTA 147 +H G + H + Sbjct: 802 EHTGLVKLRHGVS 814 >Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein W02B9.1b protein. Length = 2920 Score = 28.7 bits (61), Expect = 2.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 78 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 134 ++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801 Query: 135 DHNGFNAVVHNTA 147 +H G + H + Sbjct: 802 EHTGLVKLRHGVS 814 >AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical protein W02B9.1b protein. Length = 2920 Score = 28.7 bits (61), Expect = 2.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 78 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 134 ++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801 Query: 135 DHNGFNAVVHNTA 147 +H G + H + Sbjct: 802 EHTGLVKLRHGVS 814 >AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein protein. Length = 2920 Score = 28.7 bits (61), Expect = 2.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 78 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 134 ++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801 Query: 135 DHNGFNAVVHNTA 147 +H G + H + Sbjct: 802 EHTGLVKLRHGVS 814 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.314 0.129 0.370 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,521,399 Number of Sequences: 27539 Number of extensions: 122229 Number of successful extensions: 180 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 180 Number of HSP's gapped (non-prelim): 4 length of query: 166 length of database: 12,573,161 effective HSP length: 76 effective length of query: 90 effective length of database: 10,480,197 effective search space: 943217730 effective search space used: 943217730 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 56 (26.6 bits)
- SilkBase 1999-2023 -