Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000264-TA|BGIBMGA000264-PA|IPR000618|Insect cuticle
protein
(370 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 29 0.80
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.1
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 29 1.1
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 28 1.8
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 27 5.6
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 7.4
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 26 7.4
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 26 9.8
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 26 9.8
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 26 9.8
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 29.5 bits (63), Expect = 0.80
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 104 TGTNAQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVE 163
+G ++ T+ E S++ +NS +T + + KNL T +N+Q +K+ + G+ VE
Sbjct: 432 SGLSSSTSEESLNRHISKRSSNSNDTAPSSHIIADKNLEPT-SNIQLKKNPD---GNLVE 487
Query: 164 VLQSVDSNPVHNTVYRSSSDDIEK 187
+ DS+ N+V + S + K
Sbjct: 488 TSELSDSD--ENSVLSNKSSTLSK 509
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 108 AQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVEVLQS 167
A+ NV+ NDG+ ++ N P N N Q +E + +N V E E + + ++
Sbjct: 32 AEDNVDRESNDGNNQV-NEPTGNDNTQVVENTEDISASNVVSAEGAEASTGDASTQSPET 90
Query: 168 VDSNPVHNTVYRSSSDDIEK 187
N V N+V S ++ EK
Sbjct: 91 -SENVVKNSVDESVAEKPEK 109
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 138 PKNLHATANNVQFEKHENFVPGHNVEVLQSVDSNPVHNTVYRSSSDDIEK 187
PKNL A + E+ E G + L+ DSN + S+++D+ +
Sbjct: 478 PKNLSEMAEAKEVEREETRPKGESARYLEHADSNSDSEDLSSSANNDVHE 527
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 59 AIHADP-AVRPIAETTQGHHRQYAPIQYAP--LHPGLQNFLPNQHIALTGTNAQTN 111
A+H+ A RP+ + G + + + +P +HP LQ PNQH + ++ Q N
Sbjct: 95 ALHSQHMAYRPV-QPPPGDNMLESVVSVSPTQMHPSLQGLPPNQHPQMPPSSQQPN 149
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 97 PNQHIALTGTNAQTNVEWNGNDGSRKINNSPETNINK 133
P+ + T T + W DG+ ++ + ETN NK
Sbjct: 116 PDNSMQQTSTGVHRSSSWLTTDGTHQLLSLMETNFNK 152
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 78 RQYAPIQYAPLHPGLQNFLPNQHIALTGTNA 108
+QY I Y L PG +P+ HI+L N+
Sbjct: 357 QQYRHIAYLDLDPGQPEVVPSGHISLYYINS 387
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 301 HSGDNKSQQEVRDGDVVKGSYSFHEADGSIRTVEYTADDHNGF 343
H N ++Q V + +V DG + T D HNGF
Sbjct: 17 HVSQNIAKQVVNNENVFMKLVMTRMLDGKTEVIPLTTDVHNGF 59
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 25.8 bits (54), Expect = 9.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 131 INKQHLEPKNLHATANNVQFEKHENFVPGHNVEVLQSVDSNPVHNTVYRSSSDDI 185
+NKQ+ E + A NN +F++ NF E + V N R +S+D+
Sbjct: 295 LNKQYQEQSIIRADPNNEKFQRLANFSKSIESEFSSYASLSEVLN---RKASEDL 346
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 135 HLEPKNLHATANNVQFEKHENFVPGHNVEVL-QSVDSNPVHNTV 177
HLEP+N + Q+ V G NV+++ Q D+ P+ +
Sbjct: 61 HLEPQNAVVLHEDKQYYPSAEEVYGSNVDIMVQEQDTQPLSQPI 104
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 30 QNQSQESSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETT 73
+NQ QE + I+S + +DV TA P P +T
Sbjct: 554 ENQIQEPEPENITSSQYPNQDVIKEIPVTASETSPPHAPAVSST 597
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.126 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,524,206
Number of Sequences: 5004
Number of extensions: 62198
Number of successful extensions: 123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 10
length of query: 370
length of database: 2,362,478
effective HSP length: 74
effective length of query: 296
effective length of database: 1,992,182
effective search space: 589685872
effective search space used: 589685872
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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