Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000264-TA|BGIBMGA000264-PA|IPR000618|Insect cuticle
protein
(370 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 35 0.12
SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4) 33 0.28
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_31840| Best HMM Match : RuvA_N (HMM E-Value=5.6) 32 0.86
SB_35076| Best HMM Match : Paf1 (HMM E-Value=0.83) 32 0.86
SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5) 31 2.0
SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_8886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 59 AIHADPAVRPIAETTQGHHRQYAPIQYAPLHP 90
A H+DPAV P E + HHR + P +AP HP
Sbjct: 264 AHHSDPAVPPPIEH-RPHHRPFPPAVHAPYHP 294
>SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4)
Length = 837
Score = 33.5 bits (73), Expect = 0.28
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 119 GSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPG-HNVEVLQ-SVDSNPVHNT 176
G + I ++ + +IN +H++ N + + + E+FV G H +V Q ++D+ PVH
Sbjct: 662 GYQIIGDNLDLHINVRHMDNSNKNKSLHTFNLVAMEDFVSGSHLPDVTQRTLDTVPVHE- 720
Query: 177 VYRSSSDDIEKSPKLNK-IVVLCAFVAVSQ 205
+ S +DI PKL K ++ L + V V Q
Sbjct: 721 -FLPSVEDI---PKLKKDLIPLWSRVMVKQ 746
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 318 KGSYSFHEADGSIRTVEYTADDHNGFNAVVHNTAPTAAPTHIKAL 362
KGSY H+ DG RT+EY + G+ H T P +I L
Sbjct: 1742 KGSYDTHDVDGRRRTIEYYSGTPQGYLPPAH-TRPYPVQPNIYRL 1785
>SB_31840| Best HMM Match : RuvA_N (HMM E-Value=5.6)
Length = 895
Score = 31.9 bits (69), Expect = 0.86
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 87 PLHPGLQNFLPNQHIALTGTNA-QTNVEWNGNDGSR-KINNSPETNINKQHLEPKNLHAT 144
P HPG++ + +A T N QT++ G DG++ + N + NK L ++ +T
Sbjct: 781 PYHPGIRVAFSGEQLAPTSVNVEQTHIIRGGADGAKLQANGKSKIITNKTELADMSIQST 840
Query: 145 ANNVQFEK 152
+ +K
Sbjct: 841 PPITELQK 848
>SB_35076| Best HMM Match : Paf1 (HMM E-Value=0.83)
Length = 1010
Score = 31.9 bits (69), Expect = 0.86
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 87 PLHPGLQNFLPNQHIALTGTNA-QTNVEWNGNDGSR-KINNSPETNINKQHLEPKNLHAT 144
P HPG++ + +A T N QT++ G DG++ + N + NK L ++ +T
Sbjct: 688 PYHPGIRVAFSGEQLAPTSVNVEQTHIIRGGADGAKLQANGKSKIITNKTELADMSIQST 747
Query: 145 ANNVQFEK 152
+ +K
Sbjct: 748 PPITELQK 755
>SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5)
Length = 473
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 297 VADGHSGDNKSQQEVRDGDVVKGSYSFHEADGSIRTVEYTADDHNGFNAVVHNTAPTAAP 356
V D GD + GD V+ S SF G V Y A G A + ++ PT
Sbjct: 187 VCDSFQGDYARVSDSFQGDYVRVSDSFQSFQGDYARVRYAAAGFFGRQA-IDDSRPTLEE 245
Query: 357 THIKALPALQYYHH 370
+ + Y HH
Sbjct: 246 SRLHEGTKYGYGHH 259
>SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 177 VYRSSSDDIEKSPKLNKIVVLCAFVAVSQAGLLAAPVHYSPAEAVSSQSIVRHDQAHGTK 236
+Y ++ DD+E K + + LC AV Q + A + + S++ + +G K
Sbjct: 41 MYTTAEDDLESMKKRTRAIFLCGAFAVCQLNMSAEEAYQAMERQFRPNSVMFYCDINGNK 100
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 30.3 bits (65), Expect = 2.6
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 78 RQYAPIQYAPLHPGLQ--NFLPNQHIALTGTNAQTNVEWNGNDGSRKINNSPETNINKQH 135
+Q AP P P Q ++L NQ +L TN Q V+ +D ++ ++ + + +
Sbjct: 587 QQSAPETRPPQQPQQQREHYLQNQ--SLNVTNTQMPVQQGSSDNTQ-VSQTGDFQAQIET 643
Query: 136 LEPKNLHATANNVQFEKHENFVPGHNVE 163
+EP + N+ Q E + N P NV+
Sbjct: 644 VEPIRNNTQNNSEQAENNNNKQPQSNVQ 671
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 29.5 bits (63), Expect = 4.6
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPGLQNF 95
+S+ SSQ+F + P Y T D +VRP +++ + A + +
Sbjct: 402 ASRATSSSQAFVQR--PSDYAVTTPVKD-SVRPREVSSRITTNKSAKENTKKVKKPSEKV 458
Query: 96 LPNQHIALTGTNAQTNVEWNGNDGSRKINNSP 127
LP + + T++ + EW D I NSP
Sbjct: 459 LPVRSVGAPVTSSSSEPEWTSEDWDSDIKNSP 490
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.5 bits (63), Expect = 4.6
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 104 TGTNAQTNVEWNGNDGSRKINNS-PETNINKQHLEPKNLHATANNVQFEKHENFVPGHNV 162
+ +N+ +N N N S +NS +N N N ++ +N+ + N N
Sbjct: 446 SNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSSSSSSSNSNSNSNS-NSNSNSNSNSNSNS 504
Query: 163 EVLQSVDSNPVHNTVYRSSSDDIEKSPKLNKIVVLCAFVAVSQAGLLAAPVHYSPAEAVS 222
+ DSN N+ S+S+ S + V A + A VH S + + +
Sbjct: 505 NSNSNSDSNNNSNSNSNSNSNSNSNSNSNSNSTVTVTVTATATA-TATVTVHNSSSSSSN 563
Query: 223 SQS 225
S S
Sbjct: 564 SNS 566
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 115 NGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVEVLQSVDSNPVH 174
+ N+ ++ NN + N +K N + +NN + N ++ E S+D N ++
Sbjct: 157 DNNNNNKSNNNDDDKNNSKDDNNNNNGNKNSNNNSDSDYNNNKDNNDDENSNSIDENSIN 216
Query: 175 NTVYRSSSDD 184
N+ ++++D
Sbjct: 217 NSQGCNNNND 226
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 107 NAQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVEVLQ 166
N N N N+ + NNS +N N N +++ NN K+ N +N
Sbjct: 34 NNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNNNS 93
Query: 167 SVDSNPVHNTVYRSSSDDIEKSPK 190
+ ++N +N+ +SS + + K
Sbjct: 94 NTNNNNSNNSNNNNSSSNNNNNNK 117
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 94 NFLPNQHIALTGTNAQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKH 153
N N + + + N N + N N+ S NN+ TN N + N ++ NN + H
Sbjct: 60 NTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNNNSNTNNNNSNNSNNNNSSSNNNNNNKTH 119
>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 2/100 (2%)
Query: 76 HHRQYAPIQYAPLHPGLQNFLPNQHIALTGTNAQTNVEWNGNDGSRKINNSPETNINKQH 135
HH Q+ I+ P P + +QHI + N + R NI+
Sbjct: 382 HHHQHITIKLLPSSPSTYHHYHHQHITIITINILPSSPSTYYHHHRYYITGIAINISP-- 439
Query: 136 LEPKNLHATANNVQFEKHENFVPGHNVEVLQSVDSNPVHN 175
L P H + + H + + +L + SN H+
Sbjct: 440 LSPSTSHHHQPSTYYHHHHQHITITTINILPLLPSNYYHH 479
>SB_8886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 186 EKSPKLNKIVVLCAFVAVSQAGLLAAP-VHYSPAEAVSSQS 225
E SPKL L AV+ AG++A P H +P A+S Q+
Sbjct: 16 ENSPKLLINAQLTTPSAVADAGIIATPDCHQTPTTALSPQA 56
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.7 bits (61), Expect = 8.0
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 104 TGTNAQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVE 163
+G+++ +N N N S +NS +N N N + +N+ + + +
Sbjct: 149 SGSSSSSNSNSNSNSNSSSSSNS-SSNSNSNSSSSSNSSSNSNS---SSNSSSSSNSSSN 204
Query: 164 VLQSVDSNPVHNTVYRSSSDDIEKSPKLNKIVVLCAFVAVSQAGLLAAPVHYSPAEAVSS 223
+S S+ N+ SSS S + V + VAV+ A +A V + A AV++
Sbjct: 205 SSRSSSSSSNSNSNSSSSSSRSSSSSSVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAA 264
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 79 QYAPIQYAPLHPGLQNFLPNQHIALTGTNAQTNVEWNGNDGSRKINNSPETNINKQHLEP 138
+Y ++Y L PG +P Q + N N+ R N+ + N +
Sbjct: 5 KYGALEYIDLVPG-GGEVPVTQDNSNNQKQQQQKDDNNNNNKRNNNDDDKNNSKDDNNNN 63
Query: 139 KNLHATANNVQFEKHENFVPGHNVEVLQSVDSNPVHNTVYRSSSDD 184
+ NN + + N ++ E S+D N ++N+ ++++D
Sbjct: 64 NGNKNSKNNSDSDYNNNKDNNNDDENSNSIDENSINNSQGCNNNND 109
>SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.7 bits (61), Expect = 8.0
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 104 TGTNAQTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGH--N 161
+ +N+ N N N + NN+ N N + +N ++ NN + N + N
Sbjct: 49 SNSNSNNNNN-NNNRNNNSNNNNSNNNSNNNNRSNRNNNSNNNNRNNNSNNNSNNNNRSN 107
Query: 162 VEVLQSVDSNPVHNTVYRSSSDDIEKSPKLNKIVVLCAFVAVSQAGLLAAPVHYSPAEAV 221
S ++N N S++ +I ++ ++++ LC + + A + S E
Sbjct: 108 NNRNNSSNNNNRSNRNNDSNNINISRNNSNSRVIYLCGVILYNGAARVKGIQKLSDKEVS 167
Query: 222 SSQSI 226
++S+
Sbjct: 168 GTKSV 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.126 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,996,476
Number of Sequences: 59808
Number of extensions: 446575
Number of successful extensions: 1456
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1417
Number of HSP's gapped (non-prelim): 48
length of query: 370
length of database: 16,821,457
effective HSP length: 83
effective length of query: 287
effective length of database: 11,857,393
effective search space: 3403071791
effective search space used: 3403071791
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -