Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000264-TA|BGIBMGA000264-PA|IPR000618|Insect cuticle
protein
(370 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 32 0.75
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 32 0.75
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 32 0.75
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 32 0.75
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 32 0.75
Z92785-4|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 30 2.3
U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical p... 30 3.0
U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like ... 29 5.3
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 7.0
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 29 7.0
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 7.0
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 7.0
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SS ++SS + DVP+S+++ +A + + + +Q HH + Q +PL G
Sbjct: 499 SSVSSLSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNG 554
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SS ++SS + DVP+S+++ +A + + + +Q HH + Q +PL G
Sbjct: 358 SSVSSLSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNG 413
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SS ++SS + DVP+S+++ +A + + + +Q HH + Q +PL G
Sbjct: 222 SSVSSLSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNG 277
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SS ++SS + DVP+S+++ +A + + + +Q HH + Q +PL G
Sbjct: 499 SSVSSLSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNG 554
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 36 SSKQAISSQSFTREDVPISYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SS ++SS + DVP+S+++ +A + + + +Q HH + Q +PL G
Sbjct: 358 SSVSSLSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNG 413
>Z92785-4|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 103 LTGTNAQTNVEWNGNDGSRK--INNSPETNINK--QHLEPKNLHATANNVQFEKHENFVP 158
L G NAQ EWN +K +N+S N+ K QH PK + AN + + +F+
Sbjct: 242 LEGLNAQ---EWNPEHRPQKFFLNSSHSKNLLKIQQHFYPKQKDSLANGIDLAEAYDFLR 298
Query: 159 GHNVEV 164
V V
Sbjct: 299 DDGVRV 304
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 109 QTNVEWNGNDGSRKINNSPETNINKQHLEPKNLHATANNVQFEKHENFVPGHNVEVLQSV 168
QT +D SR + SP + + P + N + ++H N +P N + QSV
Sbjct: 493 QTCRRVESHDQSRSCDRSPSHSKDSNSYTPPESSLSQNYNREDQHSNVLPERNFDSRQSV 552
Query: 169 D 169
D
Sbjct: 553 D 553
>U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical
protein C16D9.8 protein.
Length = 138
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 34 QESSKQAISSQSFTREDVPISYKFTAIHAD---PAVRPIAETTQGHHRQYAPIQYAPL 88
Q+ +Q I Q + + ++P Y A+++ P P+A Q + APIQY P+
Sbjct: 57 QDPYQQYIPYQMYQQFEIPQQYSPFAVYSPVYRPQAAPVAPPPQFQAARPAPIQYHPM 114
>U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like
protease protein 2 protein.
Length = 893
Score = 29.1 bits (62), Expect = 5.3
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 96 LPNQHIALTGTNAQTNVEWNGNDG----SRKINNSPETNINKQHLEPKN-LHATANNVQF 150
L Q+ A+ T + +GNDG + KI++ E N ++ N LHA ++N +
Sbjct: 374 LQRQNGAIYSTQSVAFTHISGNDGVEDLTEKISHLGEEAYN---IDMANALHAFSDNWHY 430
Query: 151 EKHENFVPGHNVEVLQSVDSNPVHNTV 177
E H N V + E L D N T+
Sbjct: 431 EIHPNTVHNASFEQLHIGDGNSSIGTI 457
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 282 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 338
++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D
Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801
Query: 339 DHNGFNAVVHNTA 351
+H G + H +
Sbjct: 802 EHTGLVKLRHGVS 814
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 282 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 338
++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D
Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801
Query: 339 DHNGFNAVVHNTA 351
+H G + H +
Sbjct: 802 EHTGLVKLRHGVS 814
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 54 SYKFTAIHADPAVRPIAETTQGHHRQYAPIQYAPLHPG 91
SY + + P +P TTQG YAPI+Y P+ PG
Sbjct: 636 SYSYPKTTSKPYEQP--STTQG----YAPIEYTPVTPG 667
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 282 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 338
++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D
Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801
Query: 339 DHNGFNAVVHNTA 351
+H G + H +
Sbjct: 802 EHTGLVKLRHGVS 814
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 282 EDQEIAYPKYEYNYSVA-DGHSGDNKSQQEVRDGDVVKGSYSFHEADG-SIRTVE-YTAD 338
++ + P +Y VA D G Q + RD D + +YSF + +G S + + ++ D
Sbjct: 742 DESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSID 801
Query: 339 DHNGFNAVVHNTA 351
+H G + H +
Sbjct: 802 EHTGLVKLRHGVS 814
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.126 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,163,271
Number of Sequences: 27539
Number of extensions: 330000
Number of successful extensions: 640
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 634
Number of HSP's gapped (non-prelim): 14
length of query: 370
length of database: 12,573,161
effective HSP length: 82
effective length of query: 288
effective length of database: 10,314,963
effective search space: 2970709344
effective search space used: 2970709344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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