GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000262-TA|BGIBMGA000262-PA|IPR000618|Insect cuticle
protein
         (110 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       29   0.011
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       19   8.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    19   8.7  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    19   8.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   8.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    19   8.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    19   8.7  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 0.011
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 59  YKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVDYHSD 102
           Y VE  + + ++ +  T DG  V  Y  +   DGS R V Y +D
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 91  DGSERHVDYHSDK 103
           D  E H+ YH DK
Sbjct: 916 DEEEGHISYHPDK 928


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
          protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 1  MMIKVLMLVTVIGAVAA 17
          MM+K L L++++G V+A
Sbjct: 1  MMLKGLALLSILGIVSA 17


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 89  EPDGSERHVDYHSDKHSG 106
           + DG+ RH+D + D  +G
Sbjct: 64  QADGNVRHLDEYLDVDAG 81


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 5/13 (38%), Positives = 9/13 (69%)

Query: 94  ERHVDYHSDKHSG 106
           + H++YH   H+G
Sbjct: 243 KHHLEYHLRNHAG 255


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 5/13 (38%), Positives = 9/13 (69%)

Query: 94  ERHVDYHSDKHSG 106
           + H++YH   H+G
Sbjct: 1   KHHLEYHLRNHAG 13


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
          hormone 2 protein.
          Length = 68

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/21 (28%), Positives = 15/21 (71%)

Query: 2  MIKVLMLVTVIGAVAAEHAFS 22
          ++  ++L+T++G  AA+  F+
Sbjct: 4  VLLTVLLITIVGLCAAQLNFT 24


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query: 96  HVDYHSDKHSGY 107
           H  YH D H G+
Sbjct: 439 HPVYHKDPHYGF 450


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
          transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 13 GAVAAEHAFSSQH 25
          G V+AEH    QH
Sbjct: 17 GVVSAEHPHQHQH 29


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
          protein.
          Length = 325

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 13 GAVAAEHAFSSQH 25
          G V+AEH    QH
Sbjct: 17 GVVSAEHPHQHQH 29


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,939
Number of Sequences: 317
Number of extensions: 674
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 110
length of database: 114,650
effective HSP length: 49
effective length of query: 61
effective length of database: 99,117
effective search space:  6046137
effective search space used:  6046137
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)