Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000260-TA|BGIBMGA000260-PA|IPR000618|Insect cuticle
protein
         (178 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.           29   9.0  
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.           29   9.0  
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.           29   9.0  
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with...    29   9.0  

>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 104  KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTV 147
            +Y  E  V+D  H GD+ + H     ++VKG Y+  ++   I  +
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEI 1777


>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 104  KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTV 147
            +Y  E  V+D  H GD+ + H     ++VKG Y+  ++   I  +
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEI 1777


>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 104  KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTV 147
            +Y  E  V+D  H GD+ + H     ++VKG Y+  ++   I  +
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEI 1777


>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with Myc
            protein.
          Length = 4641

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 104  KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTV 147
            +Y  E  V+D  H GD+ + H     ++VKG Y+  ++   I  +
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEI 1777


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.312    0.130    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,615,801
Number of Sequences: 224733
Number of extensions: 307556
Number of successful extensions: 369
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 369
Number of HSP's gapped (non-prelim): 4
length of query: 178
length of database: 73,234,838
effective HSP length: 85
effective length of query: 93
effective length of database: 54,132,533
effective search space: 5034325569
effective search space used: 5034325569
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)