Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000258-TA|BGIBMGA000258-PA|IPR000618|Insect cuticle
protein
         (101 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm a...    28   5.3  
BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm a...    28   5.3  
AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.    28   5.3  

>BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 57  SDPHTGDH---KSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHS 100
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311


>BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 57  SDPHTGDH---KSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHS 100
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311


>AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 57  SDPHTGDH---KSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHS 100
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.136    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,204,850
Number of Sequences: 224733
Number of extensions: 503311
Number of successful extensions: 577
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 577
Number of HSP's gapped (non-prelim): 3
length of query: 101
length of database: 73,234,838
effective HSP length: 78
effective length of query: 23
effective length of database: 55,705,664
effective search space: 1281230272
effective search space used: 1281230272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)