Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000257-TA|BGIBMGA000257-PA|IPR000618|Insect cuticle
protein
(101 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 33 0.045
At1g69690.1 68414.m08020 TCP family transcription factor, putati... 30 0.32
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 29 0.42
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 29 0.42
At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1... 27 3.0
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 25 9.0
At1g78070.1 68414.m09097 WD-40 repeat family protein contains Pf... 25 9.0
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 32.7 bits (71), Expect = 0.045
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H D HG H G
Sbjct: 170 HQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQDMHGMQHQG 212
Score = 30.3 bits (65), Expect = 0.24
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H HG H G
Sbjct: 194 HQGGHGMQHQDMHGMQHQGRHGMQHQGGHEMQHQGMHGMQHQG 236
Score = 29.9 bits (64), Expect = 0.32
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H HG H G
Sbjct: 146 HQGGHGMQHQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQG 188
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSL-HQPDGSIRHVDYHGDHH 99
H G H QH+ G +G + + HQ + H HG H
Sbjct: 162 HQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQH 202
>At1g69690.1 68414.m08020 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa]
Length = 325
Score = 29.9 bits (64), Expect = 0.32
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 61 TGDHKSQHESRDGDVVKGYYSLHQPDGSIRH 91
TG+H + ++RDGD ++ HQ DGS H
Sbjct: 297 TGNHNNNQQNRDGD----HHHNHQEDGSTSH 323
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 29.5 bits (63), Expect = 0.42
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDVVKGYYSLHQPDGSIRHVDYHGDHHSG 101
E K+ DP TGD S+++ R ++KGY L+ P + +D G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 29.5 bits (63), Expect = 0.42
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDVVKGYYSLHQPDGSIRHVDYHGDHHSG 101
E K+ DP TGD S+++ R ++KGY L+ P + +D G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 130
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 64 HKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSG 101
H+ + ++G V + + PDGS V HG H G
Sbjct: 87 HEKNQKYKEGKSVLERFKISGPDGSNYWVSSHGRHIGG 124
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 51 DFEYKVSDPHTGDHKSQHESRDGDVVKG 78
DF++++S+ T + S E+R+G ++G
Sbjct: 43 DFDFELSESKTNNETSALEARNGKDIQG 70
>At1g78070.1 68414.m09097 WD-40 repeat family protein contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 229
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 51 DFEYKVSDPHTGDHKSQHESRDGDVVKG 78
DF++++S+ T + S E+R+G ++G
Sbjct: 43 DFDFELSESKTNNETSALEARNGKDIQG 70
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,143,809
Number of Sequences: 28952
Number of extensions: 66400
Number of successful extensions: 139
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 11
length of query: 101
length of database: 12,070,560
effective HSP length: 70
effective length of query: 31
effective length of database: 10,043,920
effective search space: 311361520
effective search space used: 311361520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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