BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000256-TA|BGIBMGA000256-PA|IPR000618|Insect cuticle
protein
(101 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 29 1.7
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 29 1.7
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 29 1.7
BC094696-1|AAH94696.1| 356|Homo sapiens zinc finger, CW type wi... 28 4.0
M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein. 27 7.0
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 27 9.2
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 27 9.2
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 27 9.2
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 59 PHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHY-HGDHHSG 101
PH G H H + D + + H P G H H+ HG H G
Sbjct: 361 PH-GHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHG 403
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 59 PHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHY-HGDHHSG 101
PH G H H + D + + H P G H H+ HG H G
Sbjct: 361 PH-GHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHG 403
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 59 PHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHY-HGDHHSG 101
PH G H H + D + + H P G H H+ HG H G
Sbjct: 361 PH-GHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHG 403
>BC094696-1|AAH94696.1| 356|Homo sapiens zinc finger, CW type with
PWWP domain 2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 74 DVVKGYYSLHQPDGS--ERHVHYHGDHHS 100
D KG Y + PDG+ E H+ + GD HS
Sbjct: 119 DRFKGKYVTYDPDGNVEEYHIEFLGDPHS 147
>M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 53 EYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHH 99
E VS PHT +Q E RD +G+ H ++ H G H
Sbjct: 399 ETTVSPPHTSMAPAQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGH 445
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 50 YEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHHS 100
Y EY D H ++ H Y+ H+ +H +HG +HS
Sbjct: 263 YHSEYHQGDHHPSEY--HHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 50 YEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHHS 100
Y EY D H ++ H Y+ H+ +H +HG +HS
Sbjct: 263 YHSEYHQGDHHPSEY--HHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 50 YEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHHS 100
Y EY D H ++ H Y+ H+ +H +HG +HS
Sbjct: 263 YHSEYHQGDHHPSEY--HHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHS 311
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.132 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,486,683
Number of Sequences: 224733
Number of extensions: 364677
Number of successful extensions: 692
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 682
Number of HSP's gapped (non-prelim): 14
length of query: 101
length of database: 73,234,838
effective HSP length: 78
effective length of query: 23
effective length of database: 55,705,664
effective search space: 1281230272
effective search space used: 1281230272
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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