Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000256-TA|BGIBMGA000256-PA|IPR000618|Insect cuticle
protein
(101 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g04620.1 68415.m00470 cation efflux family protein potential ... 31 0.14
At1g69690.1 68414.m08020 TCP family transcription factor, putati... 30 0.32
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 29 0.42
At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 fam... 28 1.3
At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1... 27 1.7
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 27 3.0
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 27 3.0
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ... 26 3.9
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 26 5.2
At4g37870.1 68417.m05356 phosphoenolpyruvate carboxykinase [ATP]... 25 6.8
At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697... 25 9.0
At4g28500.1 68417.m04077 no apical meristem (NAM) family protein... 25 9.0
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 31.1 bits (67), Expect = 0.14
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 60 HTGDHKSQHESRDGDVVK---GYYSLHQPDGSERHVHYHGDHH 99
H DH+ Q S + + ++S HQP+ SE+ H H DH+
Sbjct: 613 HNHDHEHQSHSHNHEECNHNHDHHSDHQPEKSEKKEHRHIDHN 655
>At1g69690.1 68414.m08020 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa]
Length = 325
Score = 29.9 bits (64), Expect = 0.32
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 61 TGDHKSQHESRDGDVVKGYYSLHQPDGSERH 91
TG+H + ++RDGD ++ HQ DGS H
Sbjct: 297 TGNHNNNQQNRDGD----HHHNHQEDGSTSH 323
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSLHQPDGSE-RHVHYHGDHHSG 101
H G H QH+ G +G + + G E +H HG H G
Sbjct: 194 HQGGHGMQHQDMHGMQHQGRHGMQHQGGHEMQHQGMHGMQHQG 236
>At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 794
Score = 27.9 bits (59), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 83 HQPDGSERHVHYHGDHH 99
H P S+RH H+H HH
Sbjct: 104 HNPLSSKRHHHHHNHHH 120
>At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 130
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 64 HKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHHSG 101
H+ + ++G V + + PDGS V HG H G
Sbjct: 87 HEKNQKYKEGKSVLERFKISGPDGSNYWVSSHGRHIGG 124
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDVVKGYYSLHQPDGSERHVHYHGDHHSG 101
E K+ DP TGD S+++ R ++KGY L+ P + + G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDVVKGYYSLHQPDGSERHVHYHGDHHSG 101
E K+ DP TGD S+++ R ++KGY L+ P + + G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
similar to GT-2 factor [Arabidopsis thaliana GI:416490
Length = 619
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 60 HTGDHKSQHESRDGDVVKG-YYSLHQPDGSERHVHYHGDHH 99
H H H+ +DG G + D S+ H H H HH
Sbjct: 62 HHHHHHHHHDIKDGGATTGEWIGQTDHDDSDNH-HQHHHHH 101
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 60 HTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGDHHS 100
+ G S+H S G + HQ +H+H+H +HS
Sbjct: 489 YPGSQSSRHHS--GPSPSRWQPSHQHHHHHQHLHHHHQNHS 527
>At4g37870.1 68417.m05356 phosphoenolpyruvate carboxykinase [ATP],
putative / PEP carboxykinase, putative / PEPCK, putative
similar to phosphoenolpyruvate carboxykinase
[Lycopersicon esculentum] GI:16950587, SP|Q9SLZ0
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
(PEP carboxykinase) (Phosphoenolpyruvate carboxylase)
(PEPCK) {Zea mays}; contains Pfam profile PF01293:
phosphoenolpyruvate carboxykinase
Length = 671
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 75 VVKGYYSLHQPDGSERHVHYHGDHHS 100
VV+G + + DGS + HG HHS
Sbjct: 107 VVRGDPAEKKTDGSTTPAYAHGQHHS 132
>At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697
Domain of unknown function
Length = 519
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 8/36 (22%)
Query: 61 TGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHG 96
TG H SQH ++G + H+ +G R+ HYHG
Sbjct: 437 TGVHMSQH-------LQGK-TYHRAEGKIRYFHYHG 464
>At4g28500.1 68417.m04077 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 305
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 87 GSERHVHYHGDHHSG 101
G RH+HYH H++G
Sbjct: 247 GGGRHLHYHLHHNNG 261
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,936,490
Number of Sequences: 28952
Number of extensions: 62687
Number of successful extensions: 126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 120
Number of HSP's gapped (non-prelim): 13
length of query: 101
length of database: 12,070,560
effective HSP length: 70
effective length of query: 31
effective length of database: 10,043,920
effective search space: 311361520
effective search space used: 311361520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
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