Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000255-TA|BGIBMGA000255-PA|IPR000618|Insect cuticle
protein
(101 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 32 0.092
12_02_1101 - 26079214-26080368 27 2.0
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636... 27 2.0
06_03_1463 + 30332510-30332601,30333443-30333488,30333565-303336... 27 3.5
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 26 6.0
05_01_0111 - 752045-752641 26 6.0
08_02_0707 - 20212190-20214592 25 8.0
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008... 25 8.0
03_03_0191 + 15302384-15302422,15302780-15303246,15303356-153035... 25 8.0
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 31.9 bits (69), Expect = 0.092
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 77 KGYYSLHQPDGSERHVHYHGDHH 99
KG + H D RH H HGDHH
Sbjct: 532 KGRHHRHHHDHRHRHGHSHGDHH 554
Score = 25.4 bits (53), Expect = 8.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 83 HQPDGSERHVHYHGDHH 99
H + H HYHG HH
Sbjct: 546 HGHSHGDHHHHYHGGHH 562
>12_02_1101 - 26079214-26080368
Length = 384
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 58 DPHTGDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHG 96
D + DHK+ GD+V+ Y D E+ VHY+G
Sbjct: 35 DHNHPDHKADILMY-GDMVEAAYKAFAGDDDEKEVHYYG 72
>06_01_0838 -
6360232-6360460,6360571-6360719,6360825-6360933,
6361446-6362276,6362865-6362969,6363084-6363180,
6363303-6363341,6363435-6363477
Length = 533
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 73 GDVVKGYYSLHQPDGSERHVHYHGD 97
G ++KGYYSL+ G +R + GD
Sbjct: 507 GKIMKGYYSLNARIGGDRSQCHQGD 531
>06_03_1463 +
30332510-30332601,30333443-30333488,30333565-30333627,
30334343-30334363
Length = 73
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 71 RDGDVVKGYYSLHQPDGSERHVHYHGDHHSG 101
+DG V+ G H DG + H H HG H G
Sbjct: 40 QDGAVLLGLR--HPWDGHDDHSHGHGHEHEG 68
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 58 DPHTGDHKSQHESRDGDVVKGYYSLHQPD 86
DP T DH +E+ D + + HQ D
Sbjct: 343 DPETTDHPQDYETEDASQISEAHLDHQAD 371
>05_01_0111 - 752045-752641
Length = 198
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 62 GDHKSQHESRDGDVVKGYYSLHQPDGSERHVHYHGD 97
G H +H + G + + +PD + HVH H D
Sbjct: 108 GGHMRRHRAMTGGMPRAIVVDKKPDVVDVHVHGHDD 143
>08_02_0707 - 20212190-20214592
Length = 800
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 83 HQPDGSERHVHYHGDHHS 100
H S HVH H DHH+
Sbjct: 508 HSHSHSHSHVHGHEDHHN 525
>07_03_1557 -
27699675-27699972,27700546-27700630,27700741-27700847,
27700942-27701135,27701252-27701368,27701466-27701631,
27701723-27701887,27702185-27703428
Length = 791
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 73 GDVVKGYYSLHQPDGSERHVHYHGDHHSG 101
GD +G +S++ G + + +GDH+ G
Sbjct: 139 GDTYRGSWSMNLKHGHGKKSYANGDHYDG 167
>03_03_0191 +
15302384-15302422,15302780-15303246,15303356-15303563,
15303723-15303794,15304295-15304430,15304619-15304890,
15305197-15305345,15305818-15305947,15306244-15306258
Length = 495
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 51 EFEYKVSDPHTGDHKSQHESRDGDV-VKGYYSLHQPDGSER-HVHYHG 96
+FE K+ D + S+HE+ G V + S H+ D ++ HV G
Sbjct: 16 QFEGKLKDGFARSNNSEHENGAGTVSISSKKSKHRVDSEKKPHVDISG 63
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,454,618
Number of Sequences: 37544
Number of extensions: 80567
Number of successful extensions: 149
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 138
Number of HSP's gapped (non-prelim): 13
length of query: 101
length of database: 14,793,348
effective HSP length: 71
effective length of query: 30
effective length of database: 12,127,724
effective search space: 363831720
effective search space used: 363831720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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