Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000254-TA|BGIBMGA000254-PA|IPR000618|Insect cuticle
protein
(279 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 42 4e-04
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 36 0.037
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 34 0.11
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 34 0.15
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 30 1.8
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 30 2.4
SB_51978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 29 3.2
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 29 4.2
SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 28 7.4
SB_49237| Best HMM Match : GAT (HMM E-Value=3.4) 28 7.4
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 28 9.8
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 19 DGHGHGHAVSSQSIV-LHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYT 77
DGHGH H S ++ H +HGH H+ +H H HG +D H ++HG++
Sbjct: 307 DGHGHSHGHSHENHGHSHENHGHSHENHGHSHEN-HGHSHKHHGHSHDNHGHSHENHGHS 365
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 19 DGHGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHK 70
+ HGH H S H H H++ G + +H EH DL HH+
Sbjct: 332 ENHGHSHENHGHSHK-HHGHSHDNHGHSHENHGHSHGHSHEHEPKQDLYHHE 382
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 29 SQSIVLHTSHGHEHQGETPAH-HQILTTQHFEHGGHYDLGHHKVQHHGYT 77
S+S H H H E H H+ H HG ++ H +HHG++
Sbjct: 302 SESCADGHGHSHGHSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHS 351
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 38 HGHEHQGETPAHHQILTTQHFEHGGH--YDLGHHKVQHHGY 76
+G H G H + H ++GGH YD GHH HH Y
Sbjct: 63 YGGYHHGYHGYHDHDVHIHHHDYGGHDHYDGGHHDGMHHDY 103
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 35 HTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
H HG+ HH H++ GGH+D HH H
Sbjct: 68 HGYHGYHDHDVHIHHHDYGGHDHYD-GGHHDGMHHDYGH 105
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 35.5 bits (78), Expect = 0.049
Identities = 16/54 (29%), Positives = 20/54 (37%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHH 74
+G H + + H H H HQ HH H H H+ HH HH
Sbjct: 244 YGCYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHH 297
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 29 SQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHH 74
S SIV++ H HQ HHQ H H H+ HH H+
Sbjct: 201 SPSIVIYRRHHQHHQHHHHHHHQ--HNHHHHHHNHHHHHHHHYHHY 244
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 35 HTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHH 74
H H H H + HH H H HY HH HH
Sbjct: 213 HHQHHHHHHHQHNHHHH-HHNHHHHHHHHYHHYHHHHHHH 251
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYTQ 78
H H H S+ I+L H +H HH +H H ++ HH HH Q
Sbjct: 173 HHHHHHPSTIIIILRHRH-RQHYNRHRRHHHHHRHRHHHHHPNHPYSHHYPNHHRQQQ 229
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
H H H +S I H H H H + IL +H +H + HH +H
Sbjct: 155 HHHHHPLSIAIIHRHRHHHHHHHHPSTI-IIILRHRHRQHYNRHRRHHHHHRH 206
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYT 77
H H H + + HT H H H T ++ LTT+H+ H + QH YT
Sbjct: 57 HDHTHDTITLTTPAHTLHYHTHVATTQHYNITLTTRHYTI-TLMTRSHSRHQHTYYT 112
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 19 DGHGH--GHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGH 68
+GHGH GHAVS H H+ Q H + HFEH H H
Sbjct: 361 NGHGHTGGHAVSPTGSKCGIRH-HQTQHLARNHDHLARILHFEHHQHLPNAH 411
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYT 77
GH V+ ++ HT GH +G T H + T H G +++ HKV H T
Sbjct: 1272 GHTVTGHTVTGHTVRGHTVRGHTVRGHTV--TDHTVTG--HNVTGHKVTGHTVT 1321
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHG--GHYDLGHHKVQH 73
GHAV+ ++ HT GH G T H + H GH GH H
Sbjct: 1412 GHAVTGHTVTGHTVTGHTVTGHTVTDHTVTGHTVTGHAVTGHTVTGHAVTDH 1463
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 20 GHG-HGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHF--EH--GGHYDLGHHKVQH 73
GH GH V+ ++ H GH+ G T H + T HF +H GH GH H
Sbjct: 1292 GHTVRGHTVTDHTVTGHNVTGHKVTGHTVTGHTL--TGHFVTDHIVTGHTITGHTVTGH 1348
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQIL--TTQHFEHGGHYDLGHHKVQH 73
GH V+ ++ HT GH G T H + T GH GH H
Sbjct: 1387 GHTVTGHAVTGHTVTGHAVTGHTVTGHAVTGHTVTGHTVTGHTVTGHTVTDH 1438
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
GH V+ +I HT GH G T H T + GH GH H
Sbjct: 1257 GHTVTGHTITGHTVTGHTVTGHTVTGH---TVRGHTVRGHTVRGHTVTDH 1303
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 24 GHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQH 73
GHAV+ ++ H GH G T H I T H GH GH H
Sbjct: 1237 GHAVTGHTVTGHNVTGHTVTGHTVTGHTI--TGH-TVTGHTVTGHTVTGH 1283
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 35 HTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYT 77
H H H H HQ QH +H H+D HH HH T
Sbjct: 6 HHHHDHHHHDHHHHDHQHHDHQHHDHQ-HHD--HHHHDHHHMT 45
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 49 HHQILTTQHFEHGGHYDLGHHKVQHHGYTQV 79
HH +L H H H+ HH+ HH +T +
Sbjct: 160 HHHLL--HHHHHHWHHHHHHHRHHHHSFTTI 188
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 22 GHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHK 70
G G SS S +H SH +H P+ H + H H H+ H+K
Sbjct: 192 GSGREKSSHSRSVHKSHSSKH--SHPSSHSTNRSHHHHH--HHSSSHYK 236
>SB_51978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 49 HHQILTTQHFEHGGHYDLGHHKVQHH 74
HHQ + HF H ++ L H ++ HH
Sbjct: 102 HHQKQSHHHFHHNPYHYLRHSQLHHH 127
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 38 HGHEHQGETPAHHQILTTQHFEHGGHYD----LGHHKVQHHGYTQV 79
H H + P HH+ H +G H + + HH V H +T V
Sbjct: 166 HPHPYPSSGPMHHRHYRRWHNSNGAHQEWAQPVDHHAVPIHAHTGV 211
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 19 DGHGHGHAVSSQSIVLHTSHGHEHQGETPAH----HQILTTQHFEHGGHYDLGHHKVQHH 74
D G+ V+ S + +G H+ + P H H H +H H++ HH QHH
Sbjct: 13 DNSNIGNNVTRHSDMHLRFYGCYHKLKNPRHRYHHHHHHQHNHHQHHHHHNHHHHHQQHH 72
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 35 HTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYTQV 79
H H+ HHQ QH H H+ HH+ HH + +
Sbjct: 36 HKLKNPRHRYHHHHHHQHNHHQHHHHHNHHH--HHQQHHHHHHHI 78
>SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 18 QDGHGHGHAVSSQSIVLHTSHGHEHQGETP 47
Q GHGH H S HT+ G H +P
Sbjct: 136 QKGHGHSHGGMSGHGHSHTTRGQSHSHTSP 165
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 23 HGHAVSSQSIVLHTSHGHEHQGETPAHHQIL 53
H H SS I++H H H HHQ L
Sbjct: 104 HHHPSSSSIIIIHHHHHHPSSSSIINHHQSL 134
>SB_49237| Best HMM Match : GAT (HMM E-Value=3.4)
Length = 623
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 21 HGHGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHHGYT 77
H +GH V + + +L TSH H T A +L T H+ GH + H + ++ Y+
Sbjct: 170 HYYGHLVITDTPLLRTSHFFGH--PTIADIPLLWTPHYY--GHLIIIDHTITNNTYS 222
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 31 SIVLHTSHGHEHQGETPAHHQILTTQHFEHGGHYDLGHHKVQHH 74
+IV++ H + Q + HHQ QH H H + +HH
Sbjct: 564 NIVINQHHHQKQQNQHHRHHQKQQNQHHRH--HQKKQNQHYRHH 605
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 147 KGVYSLHEADGTIRTVEYSADKHSG 171
KG Y H+ DG RT+EY + G
Sbjct: 1742 KGSYDTHDVDGRRRTIEYYSGTPQG 1766
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 23 HGHAVSSQSIVLHTSHGHEHQGETPAHHQILTTQHFEHGGH-YDLGHHKVQHH 74
H H + LH +H HE H T + H H YD H+ H
Sbjct: 454 HTHETTRHDTHLHDTHTHETTRHDTHLHDTHTHETTRHDTHLYDTHTHETTRH 506
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,060,355
Number of Sequences: 59808
Number of extensions: 286347
Number of successful extensions: 907
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 752
Number of HSP's gapped (non-prelim): 93
length of query: 279
length of database: 16,821,457
effective HSP length: 81
effective length of query: 198
effective length of database: 11,977,009
effective search space: 2371447782
effective search space used: 2371447782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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